GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 126 - 150 of 360 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Hormone ligand-binding receptors
  • CGA
  • FSHB
  • FSHR
  • GNRH
  • GNRH1
  • GNRH2
  • GNRHR
  • GNRHR2
  • LHB
  • LHCGR
  • TSHB
  • TSHR
Sus scrofa (pig)
Hyaluronan biosynthesis and export
  • ABCC5
  • CEMIP
  • HAS1
  • HAS3
  • SHAS2
  • shas3
Sus scrofa (pig)
Hyaluronan uptake and degradation
  • CD44
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • HYAL2
  • LYVE1
  • SLC9A1
  • STAB2
Sus scrofa (pig)
IFNG signaling activates MAPKs
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
Sus scrofa (pig)
IRS-mediated signalling
  • IRS1
  • IRS2
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
Sus scrofa (pig)
IRS-related events triggered by IGF1R
  • IGF1
  • IGF1R
  • IGF2
  • IRS1
  • IRS2
  • IRS4
Sus scrofa (pig)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
  • B2M
  • C3
  • CD1.1
  • CD1B
  • CD1D
  • CD200
  • CD200R1
  • CD22
  • CD226
  • CD247
  • CD300A
  • CD300C
  • CD300LF
  • CD300LG
  • CD3D
  • CD3E
  • CD3G
  • CD40
  • CD40LG
  • CD81
  • CD8A
  • CD8B
  • CD96
  • CLEC2B
  • CLEC4G
  • CRTAM
  • CXADR
  • DAP10
  • DAP12
  • FCGR2B
  • FCGR3A
  • HCST
  • ICAM1
  • ICAM2
  • ICAM4
  • ICAM5
  • IFITM1
  • IFITM3
  • IGKV5-2
  • ITGA4
  • ITGAL
  • ITGB1
  • ITGB2
  • ITGB7
  • JAML
  • KIR2DL1
  • KLRB1
  • KLRF1
  • KLRK1
  • LOC100125542
  • LOC100513601
  • LOC100513863
  • LOC100515551
  • LOC100515837
  • LOC100515852
  • LOC100519082
  • LOC100521998
  • LOC100523213
  • LOC100626247
  • LOC102161418
  • LOC110260307
  • LOC110261034
  • MADCAM1
  • NCR2
  • NECTIN2
  • NPDC1
  • OSCAR
  • PIANP
  • PILRA
  • PVR
  • SIGLEC1
  • SIGLEC5
  • SLA-2
  • SLA-3
  • SLA-6
  • SLA-7
  • SLA-8
  • SLAMF7
  • TNFRSF5
  • TREM1
  • TREM2
  • TREML2
  • TYROBP
  • ULBP1
  • VCAM1
  • cd1d
  • pCD1A
Sus scrofa (pig)
Inactivation of CSF3 (G-CSF) signaling
  • CSF3
  • CSF3R
  • HCK
  • JAK1
  • JAK2
  • LYN
  • TYK2
Sus scrofa (pig)
Inactivation, recovery and regulation of the phototransduction cascade
  • CALM3
  • CAMKMT
  • CNGA1
  • CNGB1
  • GNB5
  • GRK1
  • GRK4
  • GRK7
  • GUCA1B
  • GUCY2D
  • METAP1
  • METAP2
  • NMT1
  • NMT2
  • PDE6A
  • PDE6G
  • PPEF1
  • RCVRN
  • RGS9
  • RGS9BP
  • RHO
  • RHO1
Sus scrofa (pig)
Inhibition of TSC complex formation by PKB
  • AKT2
  • TSC1
  • TSC2
Sus scrofa (pig)
Initial triggering of complement
  • C1QA
  • C1QB
  • C1QC
  • C1R
  • C1S
  • C2
  • C4A
  • COLEC10
  • COLEC11
  • FCN1
  • FCN2
  • IGKV5-2
  • LOC100125542
  • LOC100523213
  • MASP1
  • MASP2
  • MBL2
Sus scrofa (pig)
Insertion of tail-anchored proteins into the endoplasmic reticulum membrane
  • A4
  • AD1
  • ALDH3A2
  • APP
  • CYB5
  • CYB5A
  • EMD
  • HMOX1
  • PRNP
  • PRP
  • SEC61B
  • SEC61G
  • SERP1
  • SGTA
  • STX1A
  • UBE2J2
  • VAMP2
  • VAPA
Sus scrofa (pig)
Insulin receptor recycling
  • ATP6AP1
  • ATP6G2
  • ATP6V0A1
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E2
  • ATP6V1B1
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1G2
  • ATP6V1H
  • CTSD
  • IDE
  • INS
  • INSR
  • PTPN1
  • PTPRF
  • TCIRG1
Sus scrofa (pig)
Insulin receptor signalling cascade
  • GRB2
  • Grb10
  • INS
  • INSR
  • SHC1
  • SOS1
Sus scrofa (pig)
Integrin cell surface interactions
  • BSG
  • CD44
  • CD47
  • CDH1
  • COL13A1
  • COL16A1
  • COL18A1
  • COL4A1
  • COL4A2
  • COL4A3
  • COL4A4
  • COL9A1
  • COL9A2
  • COL9A3
  • COMP
  • F11R
  • FGA
  • FGB
  • FGG
  • FN1
  • IBSP
  • ICAM1
  • ICAM2
  • ICAM4
  • ICAM5
  • ITGA1
  • ITGA10
  • ITGA11
  • ITGA2
  • ITGA2B
  • ITGA3
  • ITGA4
  • ITGA5
  • ITGA6
  • ITGA8
  • ITGA9
  • ITGAD
  • ITGAE
  • ITGAL
  • ITGAM
  • ITGAV
  • ITGB1
  • ITGB2
  • ITGB3
  • ITGB5
  • ITGB6
  • ITGB7
  • ITGB8
  • JAM2
  • JAM3
  • LUM
  • MADCAM1
  • OPN
  • PECAM1
  • SPP1
  • THBS1
  • TNC
  • TNN
  • VCAM1
  • VTN
Sus scrofa (pig)
Interaction With Cumulus Cells And The Zona Pellucida
  • ADAM2
  • ADAM20
  • ADAM21
  • B4GALT1
  • FTNB
  • OVGP1
  • SPAM-1
  • SPAM1
  • ZP2
  • ZP3
  • ZP3A
  • ZP4
  • ZPA
  • ZPB
Sus scrofa (pig)
Interferon gamma signaling
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • CAMK2G
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKCD
  • SOCS1
  • SOCS3
  • STAT1
  • socs1
Sus scrofa (pig)
Interleukin receptor SHC signaling
  • CSF2
  • CSF2RA
  • CSF2RB
  • GAB2
  • GRB2
  • IL2
  • IL2RA
  • IL2RB
  • IL2RG
  • IL5
  • IL5RA
  • INPP5D
  • INPPL1
  • JAK1
  • JAK2
  • JAK3
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • SHC1
  • SOS1
Sus scrofa (pig)
Interleukin-1 processing
  • CASP1
  • GSDMD
  • IGIF
  • IL18
  • IL1A
  • IL1B
  • IL1B2
  • LOC100154047
  • LOC110255300
  • LOC110258125
  • LOC110258578
  • LOC110259156
  • NFKB1
  • NFKB2
  • NFKB2_tv2
  • RELA
Sus scrofa (pig)
Interleukin-1 signaling
  • CHUK
  • CUL1
  • IKBA
  • IKBKB
  • IKBKG
  • IL1A
  • IL1B
  • IL1B2
  • IL1R1
  • IL1R2
  • IRAK1
  • IRAK2
  • IRAK3
  • IRAK4
  • LMP2
  • LOC110255300
  • LOC110258125
  • LOC110258578
  • LOC110259156
  • MAP2K6
  • MAP3K3
  • MAP3K7
  • MYD88
  • NFKB1
  • NFKBIA
  • PELI2
  • PELI3
  • PRORP
  • PSMA1
  • PSMA2
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB11
  • PSMB3
  • PSMB7
  • PSMB9
  • PSMC1
  • PSMC3
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME3
  • PSME4
  • PSMF1
  • RBX1
  • RELA
  • RPS27A
  • SKP1
  • SQSTM1
  • TAB1
  • TAB2
  • TAB3
  • TAK1b
  • TOLLIP
  • TRAF6
  • UBA52
  • UBB
  • UBC
  • UBE2NL
Sus scrofa (pig)
Interleukin-10 signaling
  • IL10
  • IL10RA
  • IL10RB
  • JAK1
  • STAT3
  • TYK2
Sus scrofa (pig)
Interleukin-12 signaling
  • IL12A
  • IL12B
  • IL12RB1
  • IL12RB2
  • JAK1
  • JAK2
  • LOC100736717
  • P4HB
  • STAT4
  • TYK2
  • stat4
Sus scrofa (pig)
Interleukin-2 signaling
  • IL2
  • IL2RA
  • IL2RB
  • IL2RG
  • JAK1
  • JAK3
  • LCK
  • PTK2B
  • SHC1
  • STAT5A
  • STAT5B
  • stat5B
Sus scrofa (pig)
Interleukin-23 signaling
  • IL12B
  • IL12RB1
  • IL23A
  • IL23R
  • JAK2
  • LOC100736717
  • P4HB
  • SGRF
  • STAT3
  • STAT4
  • TYK2
  • stat4
Sus scrofa (pig)
Interleukin-3, Interleukin-5 and GM-CSF signaling
  • CSF2
  • CSF2RA
  • CSF2RB
  • IL5
  • IL5RA
  • JAK2
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PTPN11
  • SHC1
  • STAT5A
  • STAT5B
  • TEC
  • VAV1
  • YWHAZ
  • stat5B
Sus scrofa (pig)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024