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glycogen phosphorylase B

Summary

Gene Symbol

Pygb

Organism

Rattus norvegicus (Norway rat)

External Links

NCBI Gene

25739

PubChem

25739

Alliance of Genome Resources

RGD:3460

Annotation

Keyword

Acetylation
Allosteric enzyme
Direct protein sequencing
Glycogen metabolism
Glycosyltransferase
Phosphoprotein
Pyridoxal phosphate
Reference proteome

Proteins

Displaying **all 2** entries
UniProt	Protein Name
A6KHG6
P53534

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 2** entries
GO Term	Evidence Code	PMID
glycogen catabolic process	IBA IDA IEA ISO	10634496 11071367 16226229
glycogen metabolic process	IDA	1554349

GO Hierarchy

biological process

metabolic process [inference]

catabolic process [inference]

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

cellular metabolic process [inference]

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

energy reserve metabolic process [inference]

glycogen metabolic process

glycogen catabolic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

glucan metabolic process [inference]

glycogen metabolic process

glycogen catabolic process

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

glucan metabolic process [inference]

glycogen metabolic process

glycogen catabolic process

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

glucan metabolic process [inference]

glycogen metabolic process

glycogen catabolic process

glucan catabolic process [inference]

glycogen catabolic process

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

cellular process [inference]

cellular metabolic process [inference]

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

energy reserve metabolic process [inference]

glycogen metabolic process

glycogen catabolic process

Displaying **all 2** entries
GO Term	Evidence Code	PMID
axon	IDA	17239832
cytoplasm	IBA IEA ISO

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytoplasm

cell projection [inference]

plasma membrane bounded cell projection [inference]

neuron projection [inference]

axon

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
SHG alpha-glucan phosphorylase activity
identical protein binding	IPI	1554349
linear malto-oligosaccharide phosphorylase activity
pyridoxal phosphate binding	IBA IEA
glycogen phosphorylase activity	IBA IDA IEA ISO TAS	10634496 11071367 1554349 16226229 7916624 8224611

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity [inference]

hexosyltransferase activity [inference]

1,4-alpha-oligoglucan phosphorylase activity

glycogen phosphorylase activity

binding [inference]

protein binding [inference]

identical protein binding

carbohydrate binding

small molecule binding [inference]

vitamin binding [inference]

vitamin B6 binding [inference]

pyridoxal phosphate binding

heterocyclic compound binding [inference]

vitamin B6 binding [inference]

pyridoxal phosphate binding

ion binding [inference]

anion binding [inference]

pyridoxal phosphate binding

organic cyclic compound binding

vitamin B6 binding [inference]

pyridoxal phosphate binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Rodentia

Group Name

glycogen phosphorylase, brain form

Functional Category

G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 9** entries
Gene Ontology
1,4-alpha-oligoglucan phosphorylase activity
SHG alpha-glucan phosphorylase activity
catalytic activity
glycogen catabolic process
glycogen metabolic process
glycogen phosphorylase activity
linear malto-oligosaccharide phosphorylase activity
pyridoxal phosphate binding
transferase activity

Displaying **all 3** entries
InterPro
Glycogen/starch/alpha-glucan phosphorylase
Glycosyl transferase, family 35
Phosphorylase pyridoxal-phosphate attachment site

Alliance of Genome Resources

Expression

Displaying 1 entry
Location	References
axon	PMID:17239832

Rhea

phosphate

α-D-glucose 1-phosphate

Enzyme

2.4.1.1

PMID

Ortholog

Displaying entries **1 - 10** of **106** in total

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Species	Gene ID	OrthoDB	Alliance of Genome Resources	Orthologous MAtrix
Homo sapiens	5834		HGNC:9723	HUMAN56358
Drosophila melanogaster	33386		FB:FBgn0004507
Mus musculus	110078	10090_1:000b8f	MGI:97828	MOUSE36009
Caenorhabditis elegans	178777		WB:WBGene00020696
Danio rerio	403051		ZFIN:ZDB-GENE-040928-2	DANRE50843
Xenopus tropicalis	431680		Xenbase:XB-GENE-955302
Pan troglodytes	469908			PANTR24536
Bos taurus	505560			BOVIN04625
Ovis aries	554325			SHEEP04305
Macaca mulatta	705663			MACMU02514

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Supported by JST NBDC Grant Number JPMJND2204

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GlyCosmos Portal v4.1.0

Last updated: December 9, 2024