Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
sodium voltage-gated channel beta subunit 1
Summary
- Gene Symbol
-
- SCN1B
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alternative splicing
- Atrial fibrillation
- Brugada syndrome
- Cell adhesion
- Cell membrane
- Cell projection
- Disease variant
- Disulfide bond
- Epilepsy
- Glycoprotein
- Immunoglobulin domain
- Proteomics identification
- Reference proteome
- Secreted
- Signal
- Sodium channel
- Transmembrane helix
- Voltage-gated channel
- Proteins
| UniProt | Protein Name |
|---|---|
| Q07699 |
|
| A0A1W2PR05 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| cell adhesion | ||
| axon guidance | ||
| positive regulation of sodium ion transport | ||
| positive regulation of neuron projection development | ||
| neuronal action potential propagation |
GO Hierarchy
- locomotion
biological process
biological regulation [inference]
regulation of biological process [inference]
regulation of localization [inference]
regulation of transport [inference]
regulation of transmembrane transport [inference]
regulation of monoatomic ion transport [inference]
positive regulation of transport [inference]
positive regulation of biological process [inference]
regulation of cellular process [inference]
regulation of transmembrane transport [inference]
positive regulation of cellular process [inference]
regulation of molecular function [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| voltage-gated sodium channel complex | ||
| voltage-gated sodium channel complex | ||
| extracellular region | ||
| plasma membrane | ||
| plasma membrane |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| sodium channel regulator activity | ||
| sodium channel inhibitor activity | ||
| sodium channel inhibitor activity | ||
| transmembrane transporter binding |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Sodium channel subunit beta-1
- Functional Category
-
- M: Cell wall/membrane/envelope biogenesis
- O: Posttranslational modification, protein turnover, chaperones
- T: Signal transduction mechanisms
| InterPro |
|---|
| Immunoglobulin V-set domain |
| Immunoglobulin-like domain superfamily |
| Immunoglobulin-like fold |
| Sodium channel subunit beta-1/beta-3 |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050650 | familial atrial fibrillation | |
| DOID:0080455 | developmental and epileptic encephalopathy 52 | |
| DOID:0110222 | Brugada syndrome 5 | |
| DOID:0111302 | generalized epilepsy with febrile seizures plus 1 |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 6324 | Xenbase:XB-GENE-6489136 | ||
| 20266 | ZFIN:ZDB-GENE-060503-604 | MOUSE56211 | |
| 29686 | ZFIN:ZDB-GENE-060503-783 | RATNO19638 | |
| 555423 | DANRE10595 | ||
| 618204 | BOVIN10846 | ||
| 707134 | MACMU18414 | ||
| 747705 | PANTR17941 | ||
| 100005325 | DANRE16457 | ||
| 100009211 | RABIT16051 | ||
| 100050415 | HORSE00781 |
