GlyCosmos Portal

Displaying entries **1 - 5** of 9 in total

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GO Term	Evidence Code	PMID
protein binding	IPI	18456656 19736317 23667531 24048479 24525231 25416956 25702638 27334688 29358331 30442713 31515488
RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
DNA binding	IDA NAS	16153702 18285410 18407919 19427902 7849401
DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
transcription cis-regulatory region binding	IDA	18407919

GO Hierarchy

molecular function

binding [inference]

protein binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

DNA binding

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

sequence-specific DNA binding

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

RNA binding [inference]

regulatory RNA binding [inference]

miRNA binding

transcription regulator activity [inference]

DNA-binding transcription factor activity

DNA-binding transcription factor activity, RNA polymerase II-specific

DNA-binding transcription activator activity, RNA polymerase II-specific

DNA-binding transcription activator activity [inference]

DNA-binding transcription activator activity, RNA polymerase II-specific

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Transcription factor

Functional Category

E: Amino acid transport and metabolism
J: Translation, ribosomal structure and biogenesis
T: Signal transduction mechanisms

Displaying **all 2** entries
Gene Ontology
anatomical structure morphogenesis
cell differentiation

Displaying **all 2** entries
InterPro
High mobility group box domain superfamily
High mobility group box domain

Disease

Disease Ontology

Displaying **all 10** entries
DO ID	Disease Name	Source
DOID:0050865	tongue squamous cell carcinoma	Alliance of Genome Resources
DOID:0111801	syndromic microphthalmia 3	Alliance of Genome Resources
DOID:10811	nasal cavity cancer	Alliance of Genome Resources
DOID:1574	alcohol use disorder	Alliance of Genome Resources
DOID:1612	breast cancer	Alliance of Genome Resources
DOID:1749	squamous cell carcinoma	Alliance of Genome Resources
DOID:1909	melanoma	Alliance of Genome Resources
DOID:2671	transitional cell carcinoma	Alliance of Genome Resources
DOID:4947	cholangiocarcinoma	Alliance of Genome Resources
DOID:6000	congestive heart failure	Alliance of Genome Resources

Ortholog

Displaying entries **31 - 40** of 54 in total

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Species	Gene ID	Orthologous MAtrix
Astyanax mexicanus	103042739	ASTMX11156
Chlorocebus sabaeus	103221186	CHLSB04671
Nannospalax galili	103735982	NANGA23902
Rhinopithecus roxellana	104662510	RHIRO29878
Macaca nemestrina	105480085	MACNE06478
Cercocebus atys	105598954	CERAT40528
Propithecus coquereli	105807603	PROCO01099
Dipodomys ordii	105998356	DIPOR19952
Salmo salar	106584342	SALSA86380
Ictalurus punctatus	108271395	ICTPU01249

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements