GlyCosmos Portal

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GO Term	Evidence Code	PMID
DNA binding	IBA
DNA N-glycosylase activity	TAS
satellite DNA binding	TAS	9774669
pyrimidine-specific mismatch base pair DNA N-glycosylase activity	IDA	14614141
DNA endonuclease activity	TAS	10097147

GO Hierarchy

molecular function

catalytic activity [inference]

hydrolase activity [inference]

hydrolase activity, acting on ester bonds [inference]

nuclease activity [inference]

endonuclease activity [inference]

DNA endonuclease activity

DNA nuclease activity [inference]

DNA endonuclease activity

hydrolase activity, acting on glycosyl bonds [inference]

hydrolase activity, hydrolyzing N-glycosyl compounds [inference]

DNA N-glycosylase activity

mismatch base pair DNA N-glycosylase activity [inference]

pyrimidine-specific mismatch base pair DNA N-glycosylase activity

catalytic activity, acting on a nucleic acid [inference]

catalytic activity, acting on DNA [inference]

DNA nuclease activity [inference]

DNA endonuclease activity

DNA N-glycosylase activity

mismatch base pair DNA N-glycosylase activity [inference]

pyrimidine-specific mismatch base pair DNA N-glycosylase activity

binding [inference]

protein binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

DNA binding

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

satellite DNA binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

satellite DNA binding

Gene Ontology information from NCBI Gene and UniProt.

Human Protein Atlas

ENSG00000129071

Tissue with high expression from Human Protein Atlas. Tissues that are highly expressed are highlighted.

Data available from v23.0.proteinatlas.org. Image credit: Human Protein Atlas

Disease

Disease Ontology

Displaying entries **11 - 20** of 71 in total

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DO ID	Disease Name	Source
DOID:1325	bronchus cancer	DisGeNET
DOID:13375	temporal arteritis	DisGeNET
DOID:13399	color blindness	DisGeNET
DOID:13608	biliary atresia	DisGeNET DisGeNET
DOID:1380	endometrial cancer	DisGeNET DisGeNET
DOID:13909	red-green color blindness	DisGeNET
DOID:13910	red color blindness	DisGeNET
DOID:13911	achromatopsia	DisGeNET
DOID:13912	acquired color blindness	DisGeNET
DOID:1520	colon carcinoma	DisGeNET

The Human Phenotype Ontology

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HPO ID	HPO Term
HP:0100008	Schwannoma

Displaying **all 2** entries
Disease ID	Disease Name
OMIM:619975	tumor predisposition syndrome 2
OMIM:606660	melanoma, uveal, susceptibility to, 1

PubChem Disease

MedGen Diseases

OMIM Phenotypes

KEGG Diseases

Tumor predisposition syndrome

Gene-Disease-Co-Occurrences-in-Literature (PubChem)

Ortholog

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Danio rerio	101887128	ZFIN:ZDB-GENE-040213-1
Xenopus laevis	108714643	Xenbase:XB-GENE-6487015
Xenopus tropicalis	733528	Xenbase:XB-GENE-489215
Ornithorhynchus anatinus	100074449		ORNAN28005
Erinaceus europaeus	103108238		ERIEU11017
Cercocebus atys	105585848		CERAT02528
Macaca mulatta	720557		MACMU28014
Macaca nemestrina	105477770		MACNE19441
Mandrillus leucophaeus	105555322		MANLE36733
Gorilla gorilla gorilla	101134542		GORGO28609

ChIP-Atlas

Target Genes: Predicted target genes bound by given transcription factors. Target Genes
Potential target genes for MBD4
Distance from TSS: ± 10 kb

Displaying entries **1 - 10** of **148** in total

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Gene Symbol	Description	Cellline (score)
COG1	component of oligomeric golgi complex 1	Hep_G2(283)
NGLY1	N-glycanase 1	Hep_G2(127)
MGAT4A	alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A	Hep_G2(110)
PLA2G10	phospholipase A2 group X	Hep_G2(162)
RPE	ribulose-5-phosphate-3-epimerase	Hep_G2(77)
PLOD3	procollagen-lysine,2-oxoglutarate 5-dioxygenase 3	Hep_G2(106)
GBA1	glucosylceramidase beta 1	Hep_G2(142)
TREH	trehalase	Hep_G2(134)
LPIN1	lipin 1	Hep_G2(161)
PLCH1	phospholipase C eta 1	Hep_G2(83)

Colocalization: Predicted partner proteins colocalizing with given transcription factors. Colocalization
Colocalization analysis for MBD4

Displaying 1 entry
Gene Symbol	Description	Cellline (score)
MBD4	methyl-CpG binding domain 4, DNA glycosylase	Hep_G2(10)

An integrative, comprehensive database to explore public Epigenetic dataset, including ChIP-Seq, DNase-Seq, ATAC-Seq, and Bisulfite-Seq data: ChIP-Atlas covers almost all public data archived in Sequence Read Archive of NCBI, EBI, and DDBJ with over 224,000 experiments.

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

All Resources

Other Information

Tools

Search Tools

Summary

External Links

Annotation

PubChem Disease

International Collaboration

Acknowledgements