GlyCosmos Portal

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Organisms	Evidence
Coturnix japonica (Japanese quail)	GlyTouCan(glycome-db)
Bos taurus (domestic cattle)	GlyTouCan(glycome-db)
Neisseria gonorrhoeae	GlyTouCan(bcsdb)
Homo sapiens (human)	GlyTouCan(glycome-db)
Neisseria meningitidis	GlyTouCan(glycome-db)

Taxonomic Hierarchy

root

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Myomorpha (mice and others) [inference]

Muroidea [inference]

Muridae [inference]

Murinae [inference]

Rattus

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Laurasiatheria [inference]

Artiodactyla (even-toed ungulates & whales) [inference]

Ruminantia [inference]

Pecora [inference]

Bovidae [inference]

Bovinae [inference]

Bos (cattle) [inference]

Bos taurus (domestic cattle)

Sauropsida (sauropsids) [inference]

Sauria (diapsids) [inference]

Archelosauria [inference]

Archosauria [inference]

Dinosauria [inference]

Saurischia [inference]

Theropoda [inference]

Coelurosauria [inference]

Aves (birds) [inference]

Neognathae [inference]

Galloanserae [inference]

Galliformes (landfowls) [inference]

Phasianidae (turkeys) [inference]

Perdicinae [inference]

Coturnix [inference]

Coturnix japonica (Japanese quail)

Bacteria (eubacteria) [inference]

Pseudomonadota [inference]

Betaproteobacteria [inference]

Neisseriales [inference]

Neisseriaceae [inference]

Neisseria [inference]

Gammaproteobacteria [inference]

Enterobacterales [inference]

Enterobacteriaceae [inference]

Escherichia [inference]

Escherichia coli

Terrabacteria group [inference]

Bacillota [inference]

Bacilli [inference]

Lactobacillales [inference]

Streptococcaceae [inference]

Streptococcus [inference]

Streptococcus pneumoniae

GlycoGene Database (GGDB)

Displaying **all 4** entries
Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT3	UDP-Gal	G06239NA	R	G58896AZ	R	9792633
B4GALT4	UDP-Gal	G06239NA	Cer	G58896AZ	Cer	9792633
B4GALT3	UDP-Gal	G06239NA	Cer	G58896AZ	Cer	9405390
B3GNT5	UDP-GlcNAc	G84224TW	Cer	G06239NA	Cer	11283017

Displaying entries **1 - 5** of 15 in total

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT1	UDP-Gal	G06239NA	N-linked > O-linked	G58896AZ	N-linked > O-linked	10580128
B4GALT4	UDP-Gal	G06239NA		G58896AZ		10580128
B3GALT2	UDP-Gal	G06239NA	Cer	G00049MO	Cer	9582303
B4GALT3	UDP-Gal	G06239NA	R	G58896AZ	R	9792633
B4GALT4	UDP-Gal	G06239NA	Cer	G58896AZ	Cer	9792633

Displaying **all 2** entries
Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
CHST2	PAPS	G06239NA		8870671
B3GALT4	UDP-Gal	G06239NA	Cer	9582303

KEGG BRITE Database

KEGG ID

G00036

Enzyme

Reactions

Displaying **all 3** entries
KEGG Reaction	Enzyme	Acceptor	Product
R06006	2.4.1.86	G06239NA	G00049MO
R05977	2.4.1.- 2.4.1.275	G06239NA	G58896AZ
R05971	2.4.1.206	G84224TW	G06239NA

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
3b:b-dglc-HEX-1:5
4s:n-acetyl
LIN
1:1o(4+1)2d
2:2o(3+1)3d
3:3d(2+1)4n

WURCS

WURCS=2.0/3,3,2/[a2122h-1b_1-5][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O]/1-2-3/a4-b1_b3-c1

Literature (from GlyTouCan)

BCSDB

PubAnnotation

Displaying entries **1 - 5** of 10 in total

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Title	Authors	Source	Publication Date	PubMed ID
Autophagy of mucin granules contributes to resolution of airway mucous metaplasia.	Sweeter JM Kudrna K Hunt K Thomes P Dickey BF Brody SL Dickinson JD	Sci Rep	2021 Jun 22	34158522
Loss of the dermis zinc transporter ZIP13 promotes the mildness of fibrosarcoma by inhibiting autophagy.	Lee MG Choi MA Chae S Kang MA Jo H Baek JM In KR Park H Heo H Jang D Brito S Kim ST Kim DO Lee JS Kim JR Bin BH	Sci Rep	2019 Oct 21	31636298
The tumor suppressor LKB1 regulates starvation-induced autophagy under systemic metabolic stress.	Mans LA Querol Cano L van Pelt J Giardoglou P Keune WJ Haramis AG	Sci Rep	2017 Aug 4	28779098
Trehalose, sucrose and raffinose are novel activators of autophagy in human keratinocytes through an mTOR-independent pathway.	Chen X Li M Li L Xu S Huang D Ju M Huang J Chen K Gu H	Sci Rep	2016 Jun 22	27328819
High expression of lactotriaosylceramide, a differentiation-associated glycosphingolipid, in the bone marrow of acute myeloid leukemia patients.	Wang Z Wen L Ma X Chen Z Yu Y Zhu J Wang Y Liu Z Liu H Wu D Zhou D Li Y	Glycobiology	2012 Jul	22411838

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

3D Structures

KEGG BRITE Database

Sequence Descriptors

Literature (from GlyTouCan)

International Collaboration

Acknowledgements