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G90562PB

Summary

GlyTouCan ID: G90562PB
IUPAC Condensed: GalNAc(b1-4)Gal(b1-4)Glc(b1-
Motifs: Lactosylceramide
Subsumption Level: Fully-defined saccharide
Monoisotopic Mass: 545.2

External Links

GlyGen

G90562PB

ChEBI

145641

PubChem Compound

10230776

PubChem Substance

252279468

3D Structures

GlycoNAVI: G90562PB
GlycoShape: G90562PB
GLYCAM: DGalpNAcb1-4DGalpb1-4DGlcpb1-OH

Organisms

Displaying entries **1 - 5** of 13 in total

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Organisms	Evidence
Macaca mulatta (Rhesus monkey)	GlyTouCan(glycome-db)
Macaca fuscata (Japanese macaque)	GlyTouCan(glycome-db)
Coturnix japonica (Japanese quail)	GlyTouCan(glycome-db)
Mus musculus (house mouse)	GlyTouCan(glycome-db)
Cricetulus griseus (Chinese hamster)	GlyTouCan(glycome-db)

Taxonomic Hierarchy

root

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Hystricomorpha (guinea pigs and others) [inference]

Caviidae (cavies) [inference]

Cavia (guinea pigs) [inference]

Cavia porcellus (domestic guinea pig)

Myomorpha (mice and others) [inference]

Muroidea [inference]

Cricetidae [inference]

Cricetinae (hamsters) [inference]

Cricetulus [inference]

Cricetulus griseus (Chinese hamster)

Muridae [inference]

Murinae [inference]

Rattus

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Cercopithecoidea [inference]

Cercopithecidae (Old World monkeys) [inference]

Cercopithecinae [inference]

Macaca (macaques) [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Laurasiatheria [inference]

Eulipotyphla (hedgehogs, shrews, moles and others) [inference]

Soricidae (shrews)

Crocidurinae [inference]

Suncus (musk shrews) [inference]

Suncus murinus (house shrew)

Sauropsida (sauropsids) [inference]

Sauria (diapsids) [inference]

Archelosauria [inference]

Archosauria [inference]

Dinosauria [inference]

Saurischia [inference]

Theropoda [inference]

Coelurosauria [inference]

Aves (birds) [inference]

Neognathae [inference]

Galloanserae [inference]

Galliformes (landfowls) [inference]

Phasianidae (turkeys) [inference]

Perdicinae [inference]

Coturnix [inference]

Coturnix japonica (Japanese quail)

Amphibia (amphibians) [inference]

Batrachia [inference]

Anura (frogs and toads) [inference]

Pipoidea [inference]

Pipidae (tongueless frogs) [inference]

Xenopodinae [inference]

Xenopus [inference]

Xenopus laevis (African clawed frog)

Protostomia [inference]

Spiralia [inference]

Lophotrochozoa [inference]

Mollusca (mollusks) [inference]

Bivalvia (bivalves)

Autobranchia [inference]

Heteroconchia [inference]

Palaeoheterodonta [inference]

Unionida [inference]

Unionoidea [inference]

Unionidae [inference]

Gonideinae [inference]

Sinohyriopsis [inference]

Sinohyriopsis schlegelii

GlycoGene Database (GGDB)

Displaying **all 2** entries
Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B3GALT4	UDP-Gal	G90562PB	Cer	G21856LC	Cer	9312075
B4GALNT1	UDP-GalNAc	G84224TW	Cer	G90562PB	Cer	1601877

Displaying **all 2** entries
Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B3GALT4	UDP-Gal	G90562PB	Cer	G21856LC	Cer	9312075 9582303
B4GALNT1	UDP-GalNAc	G84224TW	Cer	G90562PB	Cer	1601877 7890749

Displaying entries **1 - 5** of 6 in total

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
CHST2	PAPS	G90562PB		8870671
B3GALT2	UDP-Gal	G90562PB	Cer	9582303
B3GALT1	UDP-Gal	G90562PB	Cer	9582303
B4GALT3	UDP-Gal	G90562PB	Cer	9405390
B3GNT6	UDP-GlcNAc	G90562PB		11821425

KEGG BRITE Database

KEGG ID

G00123

Enzyme

References

2430018

Reactions

Displaying **all 2** entries
KEGG Reaction	Enzyme	Acceptor	Product
R05938	2.4.1.92	G84224TW	G90562PB
R05956	2.4.1.62	G90562PB	G21856LC

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
3b:b-dgal-HEX-1:5
4s:n-acetyl
LIN
1:1o(4+1)2d
2:2o(4+1)3d
3:3d(2+1)4n

WURCS

WURCS=2.0/3,3,2/[a2122h-1b_1-5][a2112h-1b_1-5][a2112h-1b_1-5_2*NCC/3=O]/1-2-3/a4-b1_b4-c1

PubAnnotation

Displaying entries **1 - 5** of 9 in total

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Title	Authors	Source	Publication Date	PubMed ID
UV-B irradiation-activated E3 ligase GmILPA1 modulates gibberellin catabolism to increase plant height in soybean.	Sun J Huang S Lu Q Li S Zhao S Zheng X Zhou Q Zhang W Li J Wang L Zhang K Zheng W Feng X Liu B Kong F Xiang F	Nat Commun	2023 Oct 7	37805547
FIS1 encodes a GA2-oxidase that regulates fruit firmness in tomato.	Li R Sun S Wang H Wang K Yu H Zhou Z Xin P Chu J Zhao T Wang H Li J Cui X	Nat Commun	2020 Nov 17	33203832
The regulation of ER export and Golgi retention of ST3Gal5 (GM3/GM4 synthase) and B4GalNAcT1 (GM2/GD2/GA2 synthase) by arginine/lysine-based motif adjacent to the transmembrane domain.	Uemura S Shishido F Kashimura M Inokuchi J	Glycobiology	2015 Dec	26362868
Physicochemical characterisation of the two active site mutants Trp(52)-->Phe and Asp(55)-->Val of glucoamylase from Aspergillus niger.	Christensen T Frandsen TP Kaarsholm NC Svensson B Sigurskjold BW	Biochim Biophys Acta	2002 Dec 16	12445478
Reconstitution of membranes simulating "glycosignaling domain" and their susceptibility to lyso-GM3.	Iwabuchi K Zhang Y Handa K Withers DA Sinaÿ P Hakomori S	J Biol Chem	2000 May 19	10809752

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Summary

External Links

3D Structures

KEGG BRITE Database

Sequence Descriptors

International Collaboration

Acknowledgements