MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner ▼ | Partner Name | Partner Species |
|---|---|---|---|---|---|
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | P10636 | Mapt | Homo sapiens |
| PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens | P10636 | Mapt | Homo sapiens |
| MULT_78_human | PDGF-BB | Homo sapiens | P10493 | Nid1 | Mus musculus |
| MULT_80_human | PDGF-AA | Homo sapiens | P10493 | Nid1 | Mus musculus |
| GAG_1 | Heparin | P10145 | CXCL8 | Homo sapiens | |
| GAG_2 | Heparan sulfate | P10145 | CXCL8 | Homo sapiens | |
| PFRAG_48_human | Major prion protein | Homo sapiens | P10126 | Eef1a1 | Mus musculus |
| PFRAG_48_human | Major prion protein | Homo sapiens | P10107 | Anxa1 | Mus musculus |
| GAG_1 | Heparin | P10039 | TNC | Gallus gallus | |
| GAG_2 | Heparan sulfate | P10039 | TNC | Gallus gallus | |
| GAG_3 | Dermatan Sulfate | P10039 | TNC | Gallus gallus | |
| Q9NZ94-2 | Nlgn3 | Homo sapiens | P0DN86-1 | CGB3 | Homo sapiens |
| Q96JN8-2 | Neurl4 | Homo sapiens | P0CAP2-3 | POLR2M | Homo sapiens |
| Q99062-1 | Csf3r | Homo sapiens | P09919-1 | CSF3 | Homo sapiens |
| CAT_3 | Calcium | P09871 | C1s | Homo sapiens | |
| PFRAG_1_human | Endostatin | Homo sapiens | P09493 | TPM1 | Homo sapiens |
| MULT_3_rat | Collagen-I | Rattus norvegicus | P09486 | SPARC | Homo sapiens |
| MULT_4_VAR1_human | Collagen-IV v1 | Homo sapiens | P09486 | SPARC | Homo sapiens |
| MULT_4_VAR1_mouse | Collagen-IV v1 | Mus musculus | P09486 | SPARC | Homo sapiens |
| MULT_78_human | PDGF-BB | Homo sapiens | P09486 | SPARC | Homo sapiens |
| MULT_80_human | PDGF-AA | Homo sapiens | P09486 | SPARC | Homo sapiens |
| CAT_3 | Calcium | P09486 | SPARC | Homo sapiens | |
| GAG_1 | Heparin | P09038 | FGF2 | Homo sapiens | |
| GAG_2 | Heparan sulfate | P09038 | FGF2 | Homo sapiens | |
| GAG_1 | Heparin | P08934 | Kng1 | Rattus norvegicus |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025