MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner ▼ | Partner Name | Partner Species |
|---|---|---|---|---|---|
| PFRAG_67_human | Peptidyl-prolyl cis-trans isomerase B | Homo sapiens | Q66HD0 | HSP90B1 | Rattus norvegicus |
| GAG_1 | Heparin | Q64535 | ATP7B | Rattus norvegicus | |
| GAG_1 | Heparin | Q64240 | Ambp | Rattus norvegicus | |
| GAG_1 | Heparin | Q63493 | CD1D | Rattus norvegicus | |
| GAG_1 | Heparin | Q63488 | Slc20a2 | Rattus norvegicus | |
| GAG_1 | Heparin | Q63416 | Itih3 | Rattus norvegicus | |
| GAG_1 | Heparin | Q63377 | Atp1b3 | Rattus norvegicus | |
| GAG_1 | Heparin | Q63089 | Slc22a1 | Rattus norvegicus | |
| PFRAG_67_human | Peptidyl-prolyl cis-trans isomerase B | Homo sapiens | Q63081 | Pdia6 | Rattus norvegicus |
| GAG_1 | Heparin | Q63081 | Pdia6 | Rattus norvegicus | |
| GAG_1 | Heparin | Q62975 | Serpina10 | Rattus norvegicus | |
| GAG_1 | Heparin | Q62930 | C9 | Rattus norvegicus | |
| GAG_1 | Heparin | Q62904 | Hsd17b7 | Rattus norvegicus | |
| GAG_1 | Heparin | Q62876 | Syngr1 | Rattus norvegicus | |
| GAG_1 | Heparin | Q62720 | Slc30a1 | Rattus norvegicus | |
| P37889-1 | Fbln2 | Mus musculus | Q62406-1 | Irak1 | Mus musculus |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | Q62351 | Tfrc | Mus musculus |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | Q62277 | Syp | Mus musculus |
| PFRAG_48_human | Major prion protein | Homo sapiens | Q61753 | PHGDH | Mus musculus |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | Q61735 | Cd47 | Mus musculus |
| GAG_1 | Heparin | Q61001 | Lama5 | Mus musculus | |
| GAG_1 | Heparin | Q60675 | Lama2 | Mus musculus | |
| LIP_1 | Glycolipid Sulfatide | Q60675 | Lama2 | Mus musculus | |
| GAG_1 | Heparin | Q5XIE8 | Itm2b | Rattus norvegicus | |
| GAG_1 | Heparin | Q5U2V4 | Plbd1 | Rattus norvegicus |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025