Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1792051 - 1792075 of 1794267 in total
CAZy Enzyme Classes CAZy Family GenBank ▲ Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Glycoside Hydrolases (GHs) GH13_29 VTS64637.1 gm06351:KOJKO3_RS02575 Klebsiella oxytoca 98.9111 100.0 1155.58
Glycoside Hydrolases (GHs) GH4 VTS64641.1 gm06351:KOJKO3_RS02565 Klebsiella oxytoca 99.0805 100.0 836.639
Glycoside Hydrolases (GHs) GH42 VTS64719.1 gm06351:KOJKO3_RS02375 Klebsiella oxytoca 99.701 100.0 1370.53
GlycosylTransferases (GTs) GT2 VTS64892.1 gm06351:KOJKO3_RS01935 Klebsiella oxytoca 98.7838 100.0 1480.31
GlycosylTransferases (GTs) GT4 VTS64892.1 gm06351:KOJKO3_RS01935 Klebsiella oxytoca 98.7838 100.0 1480.31
Glycoside Hydrolases (GHs) GH91 VTS65388.1 gm06351:KOJKO3_RS00315 Klebsiella oxytoca 98.6784 100.0 910.983
Glycoside Hydrolases (GHs) GH36 VTS65394.1 gm06351:KOJKO3_RS00285 Klebsiella oxytoca 99.8586 100.0 1458.35
Glycoside Hydrolases (GHs) GH88 VTS65413.1 gm06351:KOJKO3_RS00190 Klebsiella oxytoca 94.3878 100.0 778.859
Glycoside Hydrolases (GHs) GH43_10 VTS65418.1 gm06351:KOJKO3_RS00165 Klebsiella oxytoca 99.8012 100.0 1081.63
Glycoside Hydrolases (GHs) GH38 VTS65457.1 gm06351:KOJKO3_RS28140 Klebsiella oxytoca 100.0 100.0 665.225
Glycoside Hydrolases (GHs) GH20 VTS69496.1 Beta-N-acetylhexosaminidase sor:SOR_RS00255 Streptococcus oralis Uo5 88.8393 100.0 2365.88
Glycoside Hydrolases (GHs) GH35 VTS69498.1 Beta-galactosidase 3 sor:SOR_RS00265 Streptococcus oralis Uo5 97.9832 100.0 1222.99
Glycoside Hydrolases (GHs) GH77 VTS69632.1 4-alpha-glucanotransferase stv:V470_RS00600 Streptococcus sp. VT 162 97.6238 100.0 1024.23
GlycosylTransferases (GTs) GT35 VTS69635.1 Alpha-1,4 glucan phosphorylase sor:SOR_RS00590 Streptococcus oralis Uo5 98.0053 100.0 1467.6
GlycosylTransferases (GTs) GT51 VTS69648.1 Penicillin-binding protein 1B sor:SOR_RS00605 Streptococcus oralis Uo5 86.1179 99.87 1394.79
Carbohydrate-Binding Modules (CBMs) CBM50 VTS69668.1 LysM domain protein sor:SOR_RS00790 Streptococcus oralis Uo5 73.0198 100.0 558.14
Carbohydrate Esterases (CEs) CE9 VTS69675.1 N-acetylglucosamine-6-phosphate deacetylase stv:V470_RS00805 Streptococcus sp. VT 162 99.4778 100.0 778.089
GlycosylTransferases (GTs) GT51 VTS69698.1 Penicillin-binding protein 2A stv:V470_RS00920 Streptococcus sp. VT 162 94.8966 99.17 1364.75
Carbohydrate-Binding Modules (CBMs) CBM41 VTS69702.1 pullulanase sor:SOR_RS08375 Streptococcus oralis Uo5 93.9271 99.91 2364.73
Carbohydrate-Binding Modules (CBMs) CBM48 VTS69702.1 pullulanase sor:SOR_RS08375 Streptococcus oralis Uo5 93.9271 99.91 2364.73
Glycoside Hydrolases (GHs) GH13_12 VTS69702.1 pullulanase sor:SOR_RS08375 Streptococcus oralis Uo5 93.9271 99.91 2364.73
Glycoside Hydrolases (GHs) GH13_31 VTS69753.1 Glucan 1,6-alpha-glucosidase snb:SP670_RS02065 Streptococcus pneumoniae 670-6B 96.0821 100.0 1077.0
GlycosylTransferases (GTs) GT4 VTS69764.1 Glycosyl transferase sor:SOR_RS08075 Streptococcus oralis Uo5 79.1086 97.82 588.956
GlycosylTransferases (GTs) GT2 VTS69765.1 Cell wall biosynthesis glycosyltransferase bprs:CK3_00810 butyrate-producing bacterium SS3/4 40.8759 81.06 197.978
Carbohydrate-Binding Modules (CBMs) CBM32 VTS69771.1 Serine protease sor:SOR_RS08030 Streptococcus oralis Uo5 86.2309 98.94 3753.37
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024