PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding ▲ | PubMed ID |
---|---|---|---|---|---|---|---|
Raft-like plasma membrane domains
|
Galactose
|
Monosaccharides
|
Intestinal cells
|
Gal
|
Binding
|
||
Unknown
|
Fucose
|
Monosaccharides
|
Respiratory tract
|
Fuc
|
Binding
|
||
68-kDa proteins
|
N-Acetylglucosamine
|
Monosaccharides
|
Bronchial lavages of sheep with pneumonic pasteurelosis
|
GlcNAc
|
Binding
|
||
Unknown
|
Mannose
|
Monosaccharides
|
Intestinal cells
|
Man
|
Binding
|
||
MSHA (mannose/glucose-specific hemagglutinin)
|
Mannose
|
Monosaccharides
|
Patient with acute watery diarrhea
|
Man
|
Binding
|
||
MSHA (mannose/glucose-specific hemagglutinin)
|
Glucose
|
Monosaccharides
|
Patient with acute watery diarrhea
|
Glc
|
Binding
|
||
PrsG (class III)
|
Gb4 (Globoside; Globotetraose; P antigen)
|
Oligoglycosylceramides
|
Human erythrocytes
|
GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
PrsG (class III) G adhesins
|
Gb5 (Forssman glycolipid)
|
Oligoglycosylceramides
|
Acute cystitis patients
|
GalNAc(a1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
PapG (class I)
|
Gb4 (Globoside; Globotetraose; P antigen)
|
Oligoglycosylceramides
|
Human erythrocytes
|
GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Lectin-like proteins (adhesin)
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
Sputa of cystic fibrosis patients
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01