Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▲ |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Mono-de-N-acetylated S-3-PG (paragloboside)
|
Glycosphingolipids
|
Binding
|
||||
|
Fibre proteins
|
HSA glycoconjugates
|
Glycoproteins
|
Human corneal epithelial(HEC) cells
|
Binding
|
|||
|
SabA (sialic acid-binding adhesin)
|
Sialic acid
|
Monosaccharides
|
Human neutrophils
|
Binding
|
|||
|
Unknown
|
O-linked alpha 2,3 neuraminic acid on glycophorin A (GPA)
|
Glycoproteins
|
Human erythrocytes
|
Binding
|
|||
|
Progenitor toxin (type A)
|
Lactose
|
Disaccharides
|
Intestine-407 cells
|
Gal(b1-4)Glc
|
Binding
|
||
|
Progenitor toxin (type A)
|
N-acetyllactosamine (LacNAc)
|
Disaccharides
|
Intestine-407 cells
|
Gal(b1-4)GlcNAc
|
Binding
|
||
|
Unknown
|
Lactose
|
Disaccharides
|
Intestine-407 cells
|
Gal(b1-4)Glc
|
Binding
|
||
|
Unknown
|
N-acetyllactosamine (LacNAc)
|
Disaccharides
|
Intestine-407 cells
|
Gal(b1-4)GlcNAc
|
Binding
|
||
|
PorA
|
C4b-binding protein (C4bp)
|
Glycoproteins
|
Serum
|
Binding
|
|||
|
gp120
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
Human U373-MG glioma and SK-N-MC neuroblastoma cells, Human colon epithelial HT29 cells
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
Displaying entries 1581 - 1590 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
