PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▲ |
---|---|---|---|---|---|---|---|
Unknown
|
GSLs containing terminal Gal(3SO4)β1-residues
|
Glycosphingolipids
|
Binding
|
||||
BabA (blood group antigen binding adhesin)
|
Blood group Lewis b (Leb) antigen
|
Oligosaccharides
|
Binding
|
||||
Tetanus neurotoxin
|
GD2
|
Disialoglycosphingolipids
|
GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Neurotoxin (type A/B)
|
GD2
|
Disialoglycosphingolipids
|
GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
GD2
|
Disialoglycosphingolipids
|
GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
GD2
|
Disialoglycosphingolipids
|
GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
GalNAcβ4Gal-containing GSLs
|
Glycosphingolipids
|
GalNAc(b1-4)Gal
|
Binding
|
|||
Unknown
|
GalNAcβ4Gal-containing GSLs
|
Glycosphingolipids
|
GalNAc(b1-4)Gal
|
Binding
|
|||
Unknown
|
GalNAcβ4Gal-containing GSLs
|
Glycosphingolipids
|
GalNAc(b1-4)Gal
|
Binding
|
|||
Unknown
|
GalNAcβ4Gal-containing GSLs
|
Glycosphingolipids
|
GalNAc(b1-4)Gal
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01