GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name ▲	Ligand Feature	Target Source	Glycan Sequence	Binding	PubMed ID
Norovirus	Unknown	Blood group A antigen	Oligosaccharides	Saliva	GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Not Binding	18701592
Norovirus	Unknown	Blood group A antigen	Oligosaccharides	Human saliva	GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	16707048
Pseudomonas aeruginosa	PA-IIL	Blood group A antigen	Oligosaccharides		GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	16762477
Ralstonia solanacearum	RSL (30-kDa proteins)	Blood group A antigen	Oligosaccharides		GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	16762477
Norovirus	Capsid proteins	Blood group A antigen	Oligosaccharides		GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	18809496
Helicobacter pylori	BabA (blood group antigen binding adhesin)	Blood group A antigen	Oligosaccharides		GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	15273394
Streptococcus pneumoniae	FcsSBP (fucose solute-binding protein)	Blood group A antigen	Oligosaccharides		GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	19285508
Norovirus	Unknown	Blood group A antigen	Oligosaccharides		GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	18599458
Norovirus	Unknown	Blood group A antigen (A-tri-HSA)	Glycoproteins	Human serum albumin	GalNAc(a1-3)[Fuc(a1-2)]Gal(b)-O-APE	Binding	19054801
Norovirus	Unknown	Blood group A antigen (A-tri-HSA)	Glycoproteins	Saliva	GalNAc(a1-3)[Fuc(a1-2)]Gal(b)-O-APE	Binding	18701592