PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name ▲ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Bovine submaxillary mucin (BSM)
|
Glycoproteins
|
Binding
|
||||
PspC (Lary family) (alias: SpsA/CbpA/PbcA/Hic)
|
C3 and complement factor H
|
Glycoproteins
|
Binding
|
||||
PorA
|
C4b-binding protein (C4bp)
|
Glycoproteins
|
Serum
|
Binding
|
|||
Unknown
|
CD155
|
Glycoproteins
|
Binding
|
||||
FimH
|
CD48
|
Glycoproteins
|
Binding
|
||||
Type 1-pili
|
CD48
|
Glycoproteins
|
Binding
|
||||
Verotoxin (1; B-subunit)
|
CD77 (Globotriaosylceramide; Gb3)
|
Oligoglycosylceramides
|
Germinal center B lymphocytes, Burkitt's lymphoma cells
|
Gal(a1-4)Gal
|
Binding
|
||
Unknown
|
CD77 (Globotriaosylceramide; Gb3)
|
Oligoglycosylceramides
|
Germinal center B lymphocytes, Burkitt's lymphoma cells
|
Gal(a1-4)Gal
|
Binding
|
||
F1C
|
Ceramide
|
Non-glycosylated Lipids
|
Cer
|
Not Binding
|
|||
Unknown
|
Chondroitin 4-sulfate (C-4S)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01