GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name ▲	Ligand Feature	Target Source	Binding	PubMed ID
Borrelia burgdorferi	Unknown	Chondroitin 6-sulfate (C-6S)	Glycosaminoglycans	Vero cells	Not Binding	9826395
Foot-and-mouth disease virus	Natural ligand of integrin [alpha]v[beta]3	Chondroitin sulfate A	Glycosaminoglycans	Extracellular matrix (ECM)	Not Binding	8764038
Foot-and-mouth disease virus	Natural ligand of integrin [alpha]v[beta]3	Chondroitin sulfate C	Glycosaminoglycans	Extracellular matrix (ECM)	Not Binding	8764038
Human immunodeficiency virus	Unknown	Cluster of differentiation 4 (CD4)	Glycoproteins		Binding	15973004
Escherichia coli	FimH	Collagen	Glycoproteins		Binding	12010488
Escherichia coli	Type 1-pili	Collagen	Glycoproteins		Binding	12010488
Streptococcus gordonii	SspA/SspB (AgI/II family)	Collagen (type I)	Glycoproteins	humHn oral cavity (root dentine)	Binding	16177339
Borrelia burgdorferi	"DbpA, DbpB, Bgp"	Collagen (type I)	Glycoproteins		Binding	16299269
Klebsiella pneumoniae	MrkD-pili	Collagen (type V)	Glycoproteins		Binding	10341176
Klebsiella pneumoniae	MrkD-pili	Collagen (type V)	Glycoproteins		Binding	12640357