PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name ▲ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Adhesins
|
Colonic mucin
|
Glycoproteins
|
Colon
|
Binding
|
|||
FHA (tail region)
|
Complement receptor 3 (CR3) integrins
|
Glycoproteins
|
Macrophages
|
Binding
|
|||
Neurotoxin (type B)
|
Complex of synaptotagmin II and ganglioside GT1b or GD1a
|
Glycoconjugates
|
Binding
|
||||
Unknown
|
Complex of synaptotagmin II and ganglioside GT1b or GD1a
|
Glycoconjugates
|
Binding
|
||||
Adhesins
|
D-Galactose
|
Monosaccharides
|
Vascular endothelial cells (only)
|
Gal
|
Binding
|
||
PA-IL (51-kDa)
|
D-Galactose
|
Monosaccharides
|
Gal
|
Binding
|
|||
EfaA (Lary family)
|
D-Galactose-containing residues
|
Saccharides
|
Gal
|
Binding
|
|||
Adhesins
|
D-Mannose
|
Monosaccharides
|
Type-II lung cells, Vascular endothelial cells
|
Man
|
Binding
|
||
Type 1-pili
|
D-Mannose
|
Monosaccharides
|
Bladder epithelium
|
Man
|
Binding
|
||
FimCH-chaperone-adhesin complex
|
D-Mannose
|
Monosaccharides
|
Bladder epithelium
|
Man
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01