PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▲ |
---|---|---|---|---|---|---|---|
Unknown
|
Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)
|
Oligoglycosylceramides
|
Human colon adenocarcinoma cells (WiDr )
|
Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Adhesins
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
Erythrocytes
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
||
Adhesins
|
Fetuin
|
Glycoproteins
|
Bovine erythrocytes
|
Binding
|
|||
Adhesins
|
Laminin
|
Glycoproteins
|
Murine Engelbreth Holm Swarm tumor, Murine erythrocytes
|
Binding
|
|||
Adhesins
|
hCG (human chorionic gonadotropin)
|
Glycoproteins
|
Erythrocytes
|
Binding
|
|||
S-fimbriae
|
alpha-sialyl-beta-2,3-galactose-containing glycolipids and glycoproteins
|
Glycoconjugates
|
NeuAc(a2-3)Gal(b
|
Binding
|
|||
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01