Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name ▲ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
|
Cholera toxin
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
|
F1C
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
|
Unknown
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
|
Tetanus toxin
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
|
Natural ligand of integrin [alpha]v[beta]3
|
De-N-sulfated heparin
|
Glycosaminoglycans
|
Extracellular matrix (ECM)
|
Not Binding
|
|||
|
DbpA
|
Decorin
|
Proteoglycans
|
Extracellular matrix (ECM)
|
Binding
|
|||
|
"DbpA, DbpB, Bgp"
|
Decorin
|
Proteoglycans
|
Binding
|
||||
|
Unknown
|
Dermatan sulfate
|
Glycosaminoglycans
|
Glial cells
|
Binding
|
|||
|
BBK32
|
Dermatan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
Displaying entries 301 - 310 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
