PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Source | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Salmonella typhimurium | Unknown | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 12628483 | |
Coxsackievirus | Unknown | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 2168971 | |
Clostridium tetani | Unknown | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Not Binding | 7527546 | |
Pseudomonas cepacia | Unknown | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 12628483 | |
Rotavirus | Unknown | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 8574698 | |
Pseudomonas maltophilia | Unknown | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 3413084 | |
Actinobacillus pleuropneumoniae | LPS | Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1) | Oligoglycosylceramides | Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer | Binding | 10496867 | |
Norovirus | Capsid proteins | Blood group H1 antigen | Oligosaccharides | Fuc(a1-2)Gal(b1-3)GlcNAc | Binding | 18809496 | |
Enterococcus faecalis | EfaA (Lary family) | D-Galactose-containing residues | Saccharides | Gal | Binding | 12640357 | |
Escherichia coli | P-fimbriae | GL-IV glycolipid | Glycolipids | Binding | 7721812 | ||
Escherichia coli | P-fimbriae | GL-IV glycolipid | Glycolipids | Not Binding | 7721812 | ||
Escherichia coli | (class I/II) | GL-III glycolipid | Glycolipids | Binding | 7721812 | ||
Escherichia coli | (class I/III) | GL-II glycolipid | Glycolipids | Not Binding | 7721812 | ||
Escherichia coli | (class III) | GL-III glycolipid | Glycolipids | Not Binding | 7721812 | ||
Escherichia coli | P-fimbriae | GL-II glycolipid | Glycolipids | Not Binding | 7721812 | ||
Escherichia coli | (class I/III) | GL-IV glycolipid | Glycolipids | Not Binding | 7721812 | ||
Escherichia coli | P-fimbriae | GL-III glycolipid | Glycolipids | Binding | 7721812 | ||
Escherichia coli | (class II) | GL-II glycolipid | Glycolipids | Binding | 7721812 | ||
Escherichia coli | (class I/II) | GL-IV glycolipid | Glycolipids | Binding | 7721812 | ||
Escherichia coli | P-fimbriae | GL-II glycolipid | Glycolipids | Binding | 7721812 | ||
Escherichia coli | P-fimbriae | GL-III glycolipid | Glycolipids | Not Binding | 7721812 | ||
Fusobacterium nucleatum | Lectin-like proteins (adhesin) | Mr 89,000 PRG (Proline-Rich Glycoprotein) | Glycoproteins | Binding | 1894623 | ||
Streptococcus pneumoniae | PspC (Lary family) (alias: SpsA/CbpA/PbcA/Hic) | IgA | Glycoproteins | Binding | 12640357 | ||
Staphylococcus epidermidis | 17-kDa HBP (Heparin-binding protein) | Thrombospondin (TSP) | Glycoproteins | Binding | 11393292 | ||
Bordetella pertussis | Pertussis toxin | Haptoglobin | Glycoproteins | Binding | 1729677 |
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