GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 251 - 275 of 557 in total
Pathway Name Protein Name UniProt ID ▼ Gene Symbol Organism GlyTouCan ID
RIP-mediated NFkB activation via ZBP1
  • CHUK
  • DDX9
  • DHX9
  • IKBKB
  • IKBKG
  • IKKA
  • MYD88
  • NDH2
  • NEMO
  • NFKB1
  • NFKB2
  • NFKBIA
  • NFKBIB
  • NKIRAS1
  • NKIRAS2
  • RELA
  • bIkBa
Bos taurus (cattle)
Glycogen breakdown (glycogenolysis)
  • AGL
  • CALM
  • GAA
  • GYG1
  • GYG2
  • PHKA1
  • PHKA2
  • PHKG2
  • PYGL
  • PYGM
Bos taurus (cattle)
Nuclear Receptor transcription pathway
  • AD4BP
  • AR
  • ESR
  • ESR1
  • ESR2
  • ESRRA
  • ESRRB
  • ESRRG
  • FTZF1
  • HNF4A
  • HNF4G
  • LXRA
  • LXRB
  • MED1
  • NCOR1
  • NCOR2
  • NR0B1
  • NR0B2
  • NR1C3
  • NR1D1
  • NR1D2
  • NR1H2
  • NR1H3
  • NR1H4
  • NR1I2
  • NR1I3
  • NR2B3
  • NR2C1
  • NR2C2
  • NR2E1
  • NR2E3
  • NR2F1
  • NR2F6
  • NR3A1
  • NR3A2
  • NR3C1
  • NR3C2
  • NR4A1
  • NR4A2
  • NR4A3
  • NR5A1
  • NR5A2
  • NR6A1
  • NRBF2
  • PGR
  • PPARA
  • PPARD
  • PPARG
  • RARA
  • RARB
  • RARG
  • RORC
  • RXRA
  • RXRB
  • RXRG
  • TFCOUP1
  • THRA
  • THRB
  • VDR
Bos taurus (cattle)
Synthesis, secretion, and deacylation of Ghrelin
  • BCHE
  • GCG
  • GH1
  • GHRL
  • IGF1
  • INS
  • LEP
  • MBOAT4
  • PCSK1
  • PLA2G7
  • SEC11A
  • SEC11C
  • SEC11L1
  • SPC18
  • SPCS1
  • SPCS2
  • SPCS3
  • ob
Bos taurus (cattle)
Synthesis of glycosylphosphatidylinositol (GPI)
  • DPM2
  • GPI7
  • PIGA
  • PIGB
  • PIGC
  • PIGF
  • PIGG
  • PIGH
  • PIGL
  • PIGN
  • PIGP
  • PIGV
  • PIGW
  • PIGZ
Bos taurus (cattle)
Metabolism of steroid hormones
  • STS
Bos taurus (cattle)
The activation of arylsulfatases
  • ARSA
  • ARSB
  • ARSE
  • ARSG
  • ARSH
  • ARSI
  • ARSK
  • ARSL
  • STS
  • SUMF1
  • SUMF2
Bos taurus (cattle)
Signaling by ROBO receptors
  • CXCL12
  • CXCR4
  • GPC1
  • ROBO1
  • SLIT2
  • SLIT3
Bos taurus (cattle)
Maturation of TCA enzymes and regulation of TCA cycle
  • ACAT1
  • ACN9
  • ACO2
  • CS
  • CSKMT
  • CYB560
  • FRDA
  • FXN
  • HBLD1
  • HBLD2
  • IDH2
  • ISCA1
  • ISCA2
  • ISCU
  • ISD11
  • LYRM4
  • LYRM8
  • NFS1
  • PGL2
  • SDH5
  • SDHA
  • SDHAF1
  • SDHAF2
  • SDHAF3
  • SDHB
  • SDHC
  • SDHD
  • SIRT3
Bos taurus (cattle)
Citric acid cycle (TCA cycle)
  • ACO2
  • CS
  • CYB560
  • FH
  • HSP75
  • HSPC5
  • IDH2
  • IDH3A
  • IDH3B
  • IDH3G
  • MDH2
  • NNT
  • SDHA
  • SDHB
  • SDHC
  • SDHD
  • SUCLA2
  • SUCLG1
  • SUCLG2
  • TRAP1
Bos taurus (cattle)
Aflatoxin activation and detoxification
  • ACY1
  • AKR7A2
  • CYP1A2
  • CYP2A13
  • CYP3A28
  • CYP3A4
  • CYP3A5
  • CYP3A74
  • CYP3A76
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • GGT5
  • GGT7
  • GGTL3
  • MGST1
  • MGST2
  • MGST3
Bos taurus (cattle)
Atorvastatin ADME
  • ABCB1
  • ABCC2
  • CYP3A28
  • CYP3A4
  • CYP3A5
  • CYP3A74
  • CYP3A76
  • PON1
  • PON3
  • SLCO1B3
  • SLCO2B1
  • UGT1A6
Bos taurus (cattle)
Hydrolysis of LPC
  • CPLA2
  • LYPLA3
  • PLA2G15
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLBD1
Bos taurus (cattle)
Acyl chain remodelling of PI
  • CPLA2
  • LENG4
  • LOC613966
  • MBOAT7
  • OACT7
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2R1
  • PLBD1
Bos taurus (cattle)
Acyl chain remodelling of PE
  • ABHD4
  • CPLA2
  • HRASLS5
  • LOC613966
  • LPCAT3
  • LPCAT4
  • MBOAT1
  • MBOAT2
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2G6
  • PLA2R1
  • PLAAT1
  • PLAAT5
  • PLBD1
  • PNPLA8
Bos taurus (cattle)
Acyl chain remodelling of PC
  • CPLA2
  • LOC613966
  • LPCAT1
  • LPCAT2
  • LPCAT3
  • LPCAT4
  • MBOAT2
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2G6
  • PLA2R1
  • PLBD1
  • PNPLA8
  • TMEM86B
Bos taurus (cattle)
Amino acids regulate mTORC1
  • ATP6A1
  • ATP6B1
  • ATP6B2
  • ATP6C
  • ATP6D
  • ATP6E
  • ATP6G
  • ATP6G1
  • ATP6H
  • ATP6S14
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E
  • ATP6V0E1
  • ATP6V0E2
  • ATP6V1A
  • ATP6V1A1
  • ATP6V1B1
  • ATP6V1B2
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1E2
  • ATP6V1F
  • ATP6V1G1
  • ATP6V1G2
  • ATP6V1G3
  • ATP6V1H
  • BMT2
  • CASTOR1
  • CASTOR2
  • DEPDC5
  • FLCN
  • FNIP1
  • FNIP2
  • GATSL3
  • GBL
  • KICS2
  • KPTN
  • LAMTOR1
  • LAMTOR2
  • LAMTOR3
  • LAMTOR4
  • LAMTOR5
  • LOC101904667
  • LST8
  • MIOS
  • MLST8
  • MTOR
  • NPRL3
  • RHEB
  • RPTOR
  • RRAGA
  • RRAGB
  • RRAGC
  • RRAGD
  • SAMTOR
  • SEC13
  • SEC13L1
  • SEH1L
  • SESN1
  • SESN2
  • SH3BP4
  • SLC38A9
  • SZT2
  • TCIRG1
  • VATC
  • VATF
  • VPATPD
  • WDR24
  • WDR59
Bos taurus (cattle)
Vasopressin-like receptors
  • AVP
  • AVPR1A
  • AVPR1B
  • AVPR2
  • OXT
  • OXTR
Bos taurus (cattle)
Transport of organic anions
  • AVP
  • OATP3A1
  • OATPD
  • SLC16A2
  • SLC21A11
  • SLCO1A2
  • SLCO1B3
  • SLCO1C1
  • SLCO2A1
  • SLCO2B1
  • SLCO3A1
  • SLCO4A1
  • SLCO4C1
Bos taurus (cattle)
Vasopressin regulates renal water homeostasis via Aquaporins
  • AQP1
  • AQP2
  • AQP3
  • AQP4
  • AVP
  • AVPR2
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • MYO5B
  • PRKACA
  • PRKACB
  • PRKAR1A
  • PRKAR1B
  • PRKAR2A
  • RAB11A
  • RAB11FIP2
Bos taurus (cattle)
Assembly of collagen fibrils and other multimeric structures
  • COL10A1
  • COL11A1
  • COL11A2
  • COL1A1
  • COL1A2
  • COL27A1
  • COL2A1
  • COL3A1
  • COL4A1
  • COL5A1
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A1
  • COL8A2
Bos taurus (cattle)
Signaling by PDGF
  • COL4A1
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • FURIN
  • PDGFA
  • PDGFB
  • PDGFC
  • PDGFD
  • PDGFRA
  • PDGFRB
  • PLAT
  • PLG
  • PTPN12
  • SPP1
  • THBS1
  • THBS2
  • THBS3
  • THBS4
Bos taurus (cattle)
Collagen chain trimerization
  • COL10A1
  • COL11A1
  • COL11A2
  • COL12A1
  • COL13A1
  • COL14A1
  • COL16A1
  • COL17A1
  • COL18A1
  • COL1A1
  • COL1A2
  • COL20A1
  • COL23A1
  • COL26A1
  • COL27A1
  • COL28A1
  • COL2A1
  • COL3A1
  • COL5A1
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A1
  • COL8A2
Bos taurus (cattle)
Collagen biosynthesis and modifying enzymes
  • ADAMTS14
  • ADAMTS2
  • ADAMTS3
  • BMP1
  • COL10A1
  • COL11A1
  • COL11A2
  • COL12A1
  • COL13A1
  • COL14A1
  • COL16A1
  • COL17A1
  • COL18A1
  • COL1A1
  • COL1A2
  • COL20A1
  • COL23A1
  • COL26A1
  • COL27A1
  • COL28A1
  • COL2A1
  • COL3A1
  • COL4A1
  • COL4A3
  • COL4A5
  • COL4A6
  • COL5A1
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A1
  • COL8A2
  • COLGALT1
  • COLGALT2
  • GLT25D1
  • LEPREL1
  • NPI
  • P3H2
  • P3H3
  • P4HA1
  • P4HA2
  • P4HA3
  • P4HB
  • PCOLCE
  • PCOLCE2
  • PLOD1
  • PLOD2
  • PLOD3
  • SERPINH1
  • TLL1
  • TLL2
Bos taurus (cattle)
Erythropoietin activates RAS
  • CRKL
  • EPO
  • EPOR
  • GRB2
  • IRS2
  • JAK2
  • LYN
  • RAPGEF1
  • SHC1
  • VAV1
Bos taurus (cattle)

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Last updated: August 19, 2024