GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 326 - 350 of 557 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Highly calcium permeable postsynaptic nicotinic acetylcholine receptors
  • CHRNA1
  • CHRNA2
  • CHRNA3
  • CHRNA4
  • CHRNA5
  • CHRNA6
  • CHRNA7
  • CHRNA9
  • CHRNB2
  • CHRNB3
  • CHRNB4
Bos taurus (cattle)
Highly calcium permeable nicotinic acetylcholine receptors
  • CHRNA1
  • CHRNA2
  • CHRNA3
  • CHRNA4
  • CHRNA5
  • CHRNA6
  • CHRNB2
  • CHRNB3
  • CHRNB4
Bos taurus (cattle)
Heme signaling
  • APOA1
  • APOB
  • BACH1
  • HBA
  • HBB
  • HCP1
  • LY96
  • MAFK
  • MD-2
  • PCFT
  • PGRMC2
  • SLC46A1
  • TLR4
  • XPO1
Bos taurus (cattle)
Heme degradation
  • ABCC1
  • ABCC2
  • ABCG2
  • ALB
  • BLVRA
  • BLVRB
  • FABP1
  • GSTA1
  • GSTA2
  • GSTA5
  • HMOX1
  • HMOX2
  • MRP1
  • SCAN
  • SLCO1B3
  • SLCO2B1
  • UGT1A6
Bos taurus (cattle)
Hedgehog ligand biogenesis
  • DERL2
  • DHH
  • ERLEC1
  • HHAT
  • IHH
  • OS9
  • P4HB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SEL1L
  • SHH
  • SUG1
  • SYVN1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • VCP
Bos taurus (cattle)
Hedgehog 'on' state
  • CDC73
  • CUL3
  • DZIP1
  • EVC
  • EVC2
  • GLI1
  • GLI2
  • GLI3
  • GPR161
  • ITCH
  • KIF7
  • NUMB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • PTCH1
  • RPS27A
  • SMO
  • SMURF1
  • SMURF2
  • SPOP
  • SPOPL
  • SUFU
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • ULK3
Bos taurus (cattle)
Hedgehog 'off' state
  • ADCY1
  • ADCY2
  • ADCY3
  • ADCY4
  • ADCY5
  • ADCY6
  • ADCY8
  • ADCY9
  • FUZ
  • GLI1
  • GLI2
  • GLI3
  • GPR161
  • IFT122
  • IFT140
  • IFT52
  • IFT57
  • IFT88
  • INTU
  • KIF3A
  • KIF7
  • OFD1
  • PDZD6
  • PRKACA
  • PRKACB
  • PRKAR1A
  • PRKAR1B
  • PRKAR2A
  • PTCH1
  • RPGRIP1L
  • SMO
  • SUFU
  • TTC21B
  • TULP3
  • WDR19
  • WDR35
Bos taurus (cattle)
HSP90 chaperone cycle for SHRs
  • ACTR10
  • ACTR1A
  • AR
  • ARP10
  • CAPZA1
  • CAPZA2
  • CAPZA3
  • DCTN1
  • DCTN2
  • DCTN3
  • DCTN4
  • DCTN5
  • DCTN6
  • DNAJA1
  • DNAJA2
  • DNAJA4
  • DNAJB1
  • DNCL1
  • DYNC1H1
  • DYNC1I1
  • DYNC1LI1
  • DYNC1LI2
  • DYNLL1
  • DYNLL2
  • FKBP4
  • FKBP5
  • HSC70
  • HSP70-1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPA1A
  • HSPA1L
  • HSPA2
  • HSPA8
  • HSPC3
  • HSPCA
  • HSPCB
  • NR3C1
  • NR3C2
  • PGR
  • PTGES3
  • STIP1
Bos taurus (cattle)
HSF1-dependent transactivation
  • AKT1S1
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • CRYA2
  • CRYAB
  • DNAJB1
  • GBL
  • HSBP1
  • HSC70
  • HSF1
  • HSP70-1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPA1A
  • HSPA1L
  • HSPA8
  • HSPB8
  • HSPC3
  • HSPCA
  • HSPCB
  • LST8
  • MLST8
  • MTOR
  • RPTOR
Bos taurus (cattle)
HSF1 activation
  • EEF1A
  • EEF1A1
  • EF1A
  • HDAC6
  • HSF1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPC3
  • HSPCA
  • HSPCB
  • PTGES3
  • VCP
  • YWHAE
Bos taurus (cattle)
HS-GAG degradation
  • AGRN
  • GLB1
  • GLB1L
  • GLB1L2
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GUSB
  • HPSE
  • HPSE2
  • IDS
  • IDUA
  • NAGLU
  • SDC1
  • SDC2
  • SDC4
  • SGSH
Bos taurus (cattle)
HS-GAG biosynthesis
  • AGRN
  • EXT1
  • EXT2
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • HS2ST1
  • HS3ST1
  • HS3ST2
  • HS3ST3A1
  • HS3ST3B1
  • HS3ST5
  • HS3ST6
  • HS6ST2
  • HS6ST3
  • NDST1
  • NDST2
  • NDST4
  • SDC1
  • SDC2
  • SDC4
  • SLC35D2
Bos taurus (cattle)
HDL remodeling
  • ALB
  • APOA1
  • APOC2
  • APOC3
  • APOE
  • LCAT
  • LIPG
  • PLTP
Bos taurus (cattle)
HDL clearance
  • AMN
  • APOA1
  • CUBN
  • HDLBP
  • SCARB1
Bos taurus (cattle)
Glyoxylate metabolism and glycine degradation
  • AGXT
  • AGXT2
  • ALDH4A1
  • DAO
  • DHDPSL
  • GNMT
  • GOT2
  • GRHPR
  • HAO1
  • HOGA1
Bos taurus (cattle)
Glycosphingolipid catabolism
  • ARSA
  • ARSB
  • ARSE
  • ARSG
  • ARSH
  • ARSI
  • ARSK
  • ARSL
  • ASAH1
  • ASAH2
  • CTSA
  • ENPP7
  • GALC
  • GBA1
  • GBA2
  • GBA3
  • GLA
  • GLB1
  • GLB1L
  • GLB1L2
  • GM2A
  • HEXA
  • HEXB
  • M6PR
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • PSAP
  • SMPD1
  • SMPD3
  • SMPD4
  • STS
  • SUMF1
  • SUMF2
Bos taurus (cattle)
Glycosphingolipid biosynthesis
  • A4GALT
  • B3GALT4
  • B3GNT5
  • B4GALNT1
  • B4GALT5
  • B4GALT6
  • CERK
  • FUT1
  • FUT2
  • GALGT
  • ST3GAL2
  • ST3GAL3
  • ST3GAL5
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA5
  • UGCG
  • UGT8
  • siat4B
Bos taurus (cattle)
Glycoprotein hormones
  • CGA
  • FSHB
  • INHA
  • INHBA
  • INHBB
  • INHBC
  • INHBE
  • LHB
  • TSHB
Bos taurus (cattle)
Glycolysis
  • ADPGK
  • ALDOA
  • ALDOB
  • ALDOC
  • BPGM
  • ENO2
  • ENO3
  • ENO4
  • GAPD
  • GAPDH
  • GAPDHS
  • GCK
  • GNPDA1
  • GNPDA2
  • GPI
  • HK1
  • HK2
  • HK3
  • HKDC1
  • PFKL
  • PFKM
  • PFKP
  • PGAM1
  • PGAM2
  • PGK1
  • PGM2L1
  • PKLR
  • PKM
  • PKM2
  • TPI1
Bos taurus (cattle)
Glycogen breakdown (glycogenolysis)
  • AGL
  • CALM
  • GAA
  • GYG1
  • GYG2
  • PHKA1
  • PHKA2
  • PHKG2
  • PYGL
  • PYGM
Bos taurus (cattle)
Glycerophospholipid catabolism
  • ENPP6
  • GDE1
  • MIR16
  • PNPLA6
Bos taurus (cattle)
Glycerophospholipid biosynthesis
  • AGK
  • CPNE1
  • CPNE3
  • CPNE6
  • CPNE7
Bos taurus (cattle)
Glutathione synthesis and recycling
  • CHAC1
  • CHAC2
  • CNDP2
  • GCLC
  • GCLM
  • GGCT
  • GGT1
  • GGT5
  • GGT7
  • GGTL3
  • GSS
Bos taurus (cattle)
Glutathione conjugation
  • AKR1A1
  • ESD
  • GSTA1
  • GSTA2
  • GSTA4
  • GSTA5
  • GSTK1
  • GSTM1
  • GSTM3
  • GSTM4
  • GSTO2
  • GSTP1
  • GSTT1
  • HPGDS
  • LOC100295687
  • MGST1
  • MGST2
  • MGST3
Bos taurus (cattle)
Glutamate and glutamine metabolism
  • ALDH18A1
  • FAM80B
  • GLS
  • GLS2
  • GLUD1
  • GLUL
  • GOT2
  • OAT
  • PYCR1
  • PYCR2
  • PYCR3
  • PYCRL
  • RIMKLA
  • RIMKLB
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024