GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 76 - 100 of 557 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • ABCC1
  • ALOX15
  • ALOX5
  • ALOX5AP
  • CYP4A22
  • CYP4B1
  • CYP4F2
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • GGT5
  • LOC100295883
  • LTA4H
  • LTC4S
  • MAPKAPK2
  • MRP1
Bos taurus (cattle)
Synthesis of Ketone Bodies
  • AACS
  • ACAT1
  • ACSS3
  • BDH
  • BDH1
  • BDH2
  • HMGCL
  • HMGCLL1
  • HMGCS2
Bos taurus (cattle)
Synthesis of IP3 and IP4 in the cytosol
  • CALM
  • INPP5B
  • INPP5D
  • INPP5J
  • INPPL1
  • ITPK1
  • ITPKA
  • ITPKB
  • ITPKC
  • OCRL
  • PLCB1
  • PLCB4
  • PLCD1
  • PLCD3
  • PLCE1
  • PLCG1
  • PLCG2
  • PLCH1
  • PLCZ
  • PLCZ1
  • PLD4
  • PTEN
Bos taurus (cattle)
Synthesis of 5-eicosatetraenoic acids
  • ALOX5
  • ALOX5AP
  • LTC4S
  • PON1
  • PON2
  • PON3
Bos taurus (cattle)
Synthesis of 12-eicosatetraenoic acid derivatives
  • ALOX12
  • ALOX12B
  • ALOX15
  • ALOXE3
  • GPX1
  • GPX4
Bos taurus (cattle)
Syndecan interactions
  • FGF2
  • ITGA2
  • ITGA6
  • ITGAV
  • ITGB1
  • ITGB3
  • ITGB4
  • ITGB5
  • SDC1
  • SDC2
  • SDC4
  • TGFB1
  • VTN
Bos taurus (cattle)
Synaptic adhesion-like molecules
  • DLG1
  • DLG3
  • DLG4
  • FLOT1
  • FLOT2
  • GRIA1
  • GRIA3
  • LRFN1
  • LRFN2
  • LRFN3
  • LRFN4
  • PTPRD
  • PTPRF
  • PTPRS
  • SALM4
Bos taurus (cattle)
Switching of origins to a post-replicative state
  • CDT1
  • GMNN
  • MCM2
  • MCM3
  • MCM4
  • MCM5
  • MCM6
  • MCM7
Bos taurus (cattle)
Surfactant metabolism
  • ABCA3
  • ADA2
  • ADGRF5
  • ADORA2A
  • ADORA2B
  • ADRA2A
  • ADRA2C
  • CCDC59
  • CD163L1
  • CKAP4
  • CTSH
  • GATA6
  • LMCD1
  • LOC101907335
  • LOC751811
  • LOC786796
  • NAPSA
  • P2RY2
  • PGA5
  • SFTP3
  • SFTP4
  • SFTPA1
  • SFTPB
  • SFTPC
  • SFTPD
  • SLC34A1
  • TAP26
  • TTF1
  • WC-7
  • WC1
  • WC1-12
  • WC1.3
  • ZDHHC2
Bos taurus (cattle)
Striated Muscle Contraction
  • ACTN2
  • ACTN3
  • DES
  • DMD
  • MYBPC1
  • MYBPC3
  • MYH3
  • MYH6
  • MYH8
  • MYL1
  • MYL2
  • MYL4
  • NEB
  • TCAP
  • TMOD1
  • TMOD2
  • TMOD3
  • TMOD4
  • TNNC
  • TNNC1
  • TNNC2
  • TNNI1
  • TNNI2
  • TNNT1
  • TNNT2
  • TNNT3
  • TPM1
  • TPM2
  • TPM3
  • VIM
Bos taurus (cattle)
Stimuli-sensing channels
  • ACCN1
  • ANO10
  • ANO2
  • ANO3
  • ANO4
  • ANO5
  • ANO6
  • ANO8
  • ANO9
  • ASIC1
  • ASIC2
  • ASIC4
  • ASIC5
  • ASPH
  • BEST1
  • BEST2
  • BEST3
  • BEST4
  • CALM
  • CLCA1
  • CLCA4
  • CLCN1
  • CLCN2
  • CLCN3
  • CLCN5
  • CLCN6
  • CLCN7
  • CLCNKA
  • CLIC2
  • FKBP12.6
  • FKBP1B
  • NALCN
  • NHEDC1
  • OSTM1
  • RYR2
  • SCNN1A
  • SCNN1B
  • SCNN1D
  • SCNN1G
  • SLC17A3
  • SLC9B2
  • SRI
  • STOM
  • STOML3
  • TMEM16D
  • TPCN1
  • TPCN2
  • TTYH1
  • TTYH2
  • TTYH3
  • UNC79
  • UNC80
Bos taurus (cattle)
Stabilization of p53
  • ATM
  • CHEK2
  • MDM2
  • TP53
Bos taurus (cattle)
Sphingolipid de novo biosynthesis
  • ABCC1
  • ABCG2
  • ADMP
  • CERS1
  • CERS2
  • CERS3
  • CERS4
  • CERS5
  • CERS6
  • CERT
  • CERT1
  • COL4A3BP
  • CSNK1G2
  • CYB5B
  • DEGS1
  • DEGS2
  • DES1
  • FA2H
  • LASS1
  • LASS2
  • LASS3
  • LASS4
  • MFSD2B
  • MRP1
  • ORMDL1
  • ORMDL2
  • ORMDL3
  • OSBP
  • PPM1L
  • PRKD1
  • PRKD2
  • PRKD3
  • SAMD8
  • SGMS1
  • SGMS2
  • SPHK1
  • SPHK2
  • SPTLC1
  • SPTLC2
  • SPTSSA
  • SPTSSB
  • SSSPTA
  • SSSPTB
  • STARD11
  • VAPA
  • VAPB
Bos taurus (cattle)
Sphingolipid catabolism
  • ACER1
  • ACER2
  • ACER3
  • ALDH3A2
  • ALDH3B1
  • PLPP1
  • PLPP2
  • PLPP3
  • PPAP2B
  • PPAP2C
  • SGPL1
  • SGPP1
Bos taurus (cattle)
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
  • IGF1
  • IGF1R
  • IGF2
Bos taurus (cattle)
Signaling by SCF-KIT
  • FER
  • FES
  • FYN
  • GAB2
  • GRAP
  • GRAP2
  • GRB10
  • GRB2
  • GRB7
  • JAK2
  • KIT
  • KITLG
  • KRAS
  • LCK
  • LOC100139881
  • LOC540321
  • LYN
  • MGF
  • MMP9
  • NRAS
  • PIK3CA
  • PIK3R1
  • PIK3R2
  • PIK3R3
  • PTPN11
  • PTPRU
  • SCF
  • SOS1
  • SRC
  • STAT1
  • STAT3
  • STAT5A
  • STAT5B
  • TEC
  • VAV1
  • YES1
Bos taurus (cattle)
Signaling by ROBO receptors
  • CXCL12
  • CXCR4
  • GPC1
  • ROBO1
  • SLIT2
  • SLIT3
Bos taurus (cattle)
Signaling by PDGF
  • COL4A1
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • FURIN
  • PDGFA
  • PDGFB
  • PDGFC
  • PDGFD
  • PDGFRA
  • PDGFRB
  • PLAT
  • PLG
  • PTPN12
  • SPP1
  • THBS1
  • THBS2
  • THBS3
  • THBS4
Bos taurus (cattle)
Signaling by Insulin receptor
  • INS
  • INSR
Bos taurus (cattle)
Signaling by Erythropoietin
  • EPOR
  • IRS2
  • JAK2
  • LYN
Bos taurus (cattle)
Signaling by ERBB4
  • BTC
  • ERBB3
  • ERBB4
  • EREG
  • HBEGF
  • NRG1
  • NRG2
  • NRG3
Bos taurus (cattle)
Signaling by CSF3 (G-CSF)
  • CSF3
  • CSF3R
  • GAB2
  • GCSF
  • GRB2
  • JAK1
  • JAK2
  • KRAS
  • LYN
  • PTPN11
  • SHC1
  • SRC
  • SYK
  • TYK2
Bos taurus (cattle)
Signaling by BMP
  • ACTRII
  • ACVR2
  • ACVR2A
  • ACVR2B
  • ACVRL1
  • AMH
  • AMHR2
  • BMP10
  • BMP2
  • BMPR1A
  • BMPR1B
  • BMPR2
  • CER1
  • CHRDL1
  • FSTL1
  • GDF2
  • INHA
  • INHBA
  • NOG
  • SF3A2
  • SKI
  • SMAD1
  • SMAD4
  • SMAD5
  • SMAD6
  • SMAD7
  • SMAD9
  • SMURF1
  • SMURF2
  • TGFBR3
  • UBE2D1
  • UBE2D3
  • ZFYVE16
Bos taurus (cattle)
Signaling by Activin
  • ACTRII
  • ACVR1B
  • ACVR1C
  • ACVR2
  • ACVR2A
  • ACVR2B
  • ERK2
  • INHA
  • INHBA
  • INHBB
  • MAPK1
  • MAPK3
  • PRKM1
  • SMAD2
  • SMAD3
  • SMAD4
  • TGFBR3
Bos taurus (cattle)
Sialic acid metabolism
  • CMAS
  • CTSA
  • GLB1
  • GNE
  • NANP
  • NANS
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • NPL
  • SIAT10
  • SLC17A5
  • SLC35A1
  • ST3GAL1
  • ST3GAL2
  • ST3GAL3
  • ST3GAL4
  • ST3GAL5
  • ST3GAL6
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC2
  • ST6GALNAC4
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA4
  • ST8SIA5
  • siat4B
Bos taurus (cattle)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024