GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 101 - 125 of 557 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Tight junction interactions
  • F11R
  • JAM1
  • PARD3
  • PARD6A
  • PARD6B
  • PARD6G
  • PRKCI
Bos taurus (cattle)
DDX58/IFIH1-mediated induction of interferon-alpha/beta
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPC3
  • HSPCA
  • HSPCB
  • IRF3
  • MAVS
  • TBK1
  • TOMM70
  • TOMM70A
  • Tom70
Bos taurus (cattle)
VxPx cargo-targeting to cilium
  • ARF4
  • CNGA2
  • CNGA4
  • CNGB1
  • EXOC1
  • EXOC2
  • EXOC3
  • EXOC4
  • EXOC5
  • EXOC6
  • EXOC7
  • EXOC8
  • GBF1
  • PKD2
  • RAB11A
  • RAB11FIP3
  • RAB3IP
  • RAB8A
  • RHO
  • SEC6
  • TRPP2
Bos taurus (cattle)
Metabolism of polyamines
  • AMD1
  • ODC
  • ODC1
  • SMS
  • SRM
Bos taurus (cattle)
trans-Golgi Network Vesicle Budding
  • ARF1
  • GBF1
  • SNAP23
  • STX4
  • SYB2
  • VAMP2
  • VAMP8
Bos taurus (cattle)
Keratan sulfate degradation
  • ACAN
  • FMOD
  • GLB1
  • GLB1L
  • GLB1L2
  • GNS
  • HEXA
  • HEXB
  • KERA
  • LDC
  • LUM
  • OMD
  • PRELP
Bos taurus (cattle)
SUMOylation of immune response proteins
  • IKBKE
  • IKBKG
  • NEMO
  • NFKB2
  • NFKBIA
  • PIAS3
  • PIAS4
  • RELA
  • SUMO3
  • TOPORS
  • bIkBa
Bos taurus (cattle)
Hedgehog 'off' state
  • ADCY1
  • ADCY2
  • ADCY3
  • ADCY4
  • ADCY5
  • ADCY6
  • ADCY8
  • ADCY9
  • FUZ
  • GLI1
  • GLI2
  • GLI3
  • GPR161
  • IFT122
  • IFT140
  • IFT52
  • IFT57
  • IFT88
  • INTU
  • KIF3A
  • KIF7
  • OFD1
  • PDZD6
  • PRKACA
  • PRKACB
  • PRKAR1A
  • PRKAR1B
  • PRKAR2A
  • PTCH1
  • RPGRIP1L
  • SMO
  • SUFU
  • TTC21B
  • TULP3
  • WDR19
  • WDR35
Bos taurus (cattle)
Transcriptional activation of mitochondrial biogenesis
  • ACSS2
  • CYC
  • CYCS
  • GABPA
  • GABPB1
  • GABPB2
  • GLUD1
  • IDH2
  • SIRT3
  • SIRT4
  • SIRT5
  • SOD2
Bos taurus (cattle)
Antagonism of Activin by Follistatin
  • FST
  • INHBA
  • INHBB
Bos taurus (cattle)
GABA receptor activation
  • ARHGEF9
  • GABRA1
  • GABRA2
  • GABRA3
  • GABRA4
  • GABRA5
  • GABRA6
  • GABRB1
  • GABRB2
  • GABRB3
  • GABRG2
  • GABRQ
  • GABRR2
  • GABRR3
Bos taurus (cattle)
MAPK6/MAPK4 signaling
  • BORG1
  • CCND3
  • CDC14A
  • CDC14B
  • CDC2
  • CDC42
  • CDC42EP2
  • CDC42EP3
  • CDC42EP5
  • CDK1
  • CDKN1
  • CEP2
  • DNAJB1
  • ETV4
  • FOXO1
  • FOXO3
  • HSP27
  • HSPB1
  • MAPK4
  • MAPK6
  • MAPKAPK5
  • NCOA3
  • PAK1
  • PAK2
  • PAK3
  • PRKACA
  • PRKACB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SEPTIN7
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • XPO1
Bos taurus (cattle)
Dectin-2 family
  • CLEC10A
  • CLEC4D
  • CLEC4E
  • CLEC6A
  • DECTIN2
  • FCER1G
  • FYN
  • LOC789503
  • LYN
  • MUC1
  • MUC15
  • MUC2
  • MUC20
  • PLCG2
  • SYK
Bos taurus (cattle)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • ALG1
  • ALG12
  • ALG14
  • ALG2
  • ALG3
  • ALG6
  • ALG8
  • ALG9
  • DPAGT1
  • LOC107132045
  • MPDU1
Bos taurus (cattle)
Activation of Matrix Metalloproteinases
  • COL18A1
  • CTRB1
  • CTSK
  • CTSL
  • CTSL1
  • ELANE
  • FURIN
  • KLK1
  • KLKB1
  • KLNA1
  • LOC100139881
  • LOC112441463
  • LOC112442231
  • LOC509956
  • LOC540321
  • MMP11
  • MMP13
  • MMP14
  • MMP15
  • MMP16
  • MMP17
  • MMP2
  • MMP24
  • MMP25
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PLG
  • PRSS2
  • TIMP2
  • TPSB1
Bos taurus (cattle)
GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2
  • CUL1
  • GSK3B
  • NFE2L2
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSMF1
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Arachidonic acid metabolism
  • AWAT1
  • CPLA2
  • FAAH
  • PLA2G4
  • PLA2G4A
Bos taurus (cattle)
Erythrocytes take up oxygen and release carbon dioxide
  • AQP1
  • CA1
  • CA2
  • CA4
  • HBA
  • HBB
  • RHAG
  • SLC4A1
Bos taurus (cattle)
Transcriptional regulation by the AP-2 (TFAP2) family of transcription factors
  • DEK
  • TFAP2A
Bos taurus (cattle)
PI Metabolism
  • TNFAIP8
  • TNFAIP8L1
  • TNFAIP8L2
  • TNFAIP8L3
Bos taurus (cattle)
Reuptake of GABA
  • SLC6A1
  • SLC6A11
  • SLC6A13
Bos taurus (cattle)
NF-kB is activated and signals survival
  • IKBKB
  • IRAK1
  • NFKB1
  • NFKBIA
  • NGF
  • NGFR
  • RELA
  • RPS27A
  • SQSTM1
  • TRAF6
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • bIkBa
Bos taurus (cattle)
ATF6 (ATF6-alpha) activates chaperones
  • ATF6
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
FGFR1c ligand binding and activation
  • AFGF
  • FGF1
  • FGF17
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF5
  • FGF6
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR1
  • Fgf4
  • HBGF-1
Bos taurus (cattle)
Sphingolipid de novo biosynthesis
  • ABCC1
  • ABCG2
  • ADMP
  • CERS1
  • CERS2
  • CERS3
  • CERS4
  • CERS5
  • CERS6
  • CERT
  • CERT1
  • COL4A3BP
  • CSNK1G2
  • CYB5B
  • DEGS1
  • DEGS2
  • DES1
  • FA2H
  • LASS1
  • LASS2
  • LASS3
  • LASS4
  • MFSD2B
  • MRP1
  • ORMDL1
  • ORMDL2
  • ORMDL3
  • OSBP
  • PPM1L
  • PRKD1
  • PRKD2
  • PRKD3
  • SAMD8
  • SGMS1
  • SGMS2
  • SPHK1
  • SPHK2
  • SPTLC1
  • SPTLC2
  • SPTSSA
  • SPTSSB
  • SSSPTA
  • SSSPTB
  • STARD11
  • VAPA
  • VAPB
Bos taurus (cattle)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024