GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 126 - 150 of 557 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Effects of PIP2 hydrolysis
  • DGKA
  • DGKB
  • DGKD
  • DGKE
  • DGKI
  • DGKK
  • DGKQ
  • DGKZ
  • ITPR1
  • ITPR2
  • ITPR3
  • PRKCD
  • PRKCH
  • PRKCQ
  • TRP6
  • TRPC3
  • TRPC6
  • TRPC7
Bos taurus (cattle)
Hedgehog ligand biogenesis
  • DERL2
  • DHH
  • ERLEC1
  • HHAT
  • IHH
  • OS9
  • P4HB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SEL1L
  • SHH
  • SUG1
  • SYVN1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • VCP
Bos taurus (cattle)
Pentose phosphate pathway
  • DERA
  • G6PD
  • PGD
  • PGLS
  • PGM2
  • RBKS
  • RPE
  • RPIA
  • SHPK
  • TALDO1
  • TKT
Bos taurus (cattle)
Transcriptional regulation by the AP-2 (TFAP2) family of transcription factors
  • DEK
  • TFAP2A
Bos taurus (cattle)
DEx/H-box helicases activate type I IFN and inflammatory cytokines production
  • DDX9
  • DHX36
  • DHX9
  • MYD88
  • NDH2
  • NFKB1
  • NFKB2
  • RELA
Bos taurus (cattle)
Non-integrin membrane-ECM interactions
  • DDR1
  • DDR2
Bos taurus (cattle)
Dopamine receptors
  • D1AR
  • DRD1
  • DRD2
  • DRD3
  • DRD5
Bos taurus (cattle)
Leukotriene receptors
  • CYSLTR1
  • CYSLTR2
  • GPR17
  • LTB4R
  • LTB4R2
Bos taurus (cattle)
RHO GTPases Activate NADPH Oxidases
  • CYBA
  • CYBB
  • ERK2
  • MAPK1
  • MAPK11
  • MAPK14
  • MAPK3
  • NCF1
  • NCF2
  • NCF4
  • NOX1
  • NOX3
  • NOXO1
  • PIK3C3
  • PIK3R4
  • PIN1
  • PRKCB
  • PRKCB1
  • PRKCD
  • PRKCZ
  • PRKM1
  • RAC2
  • S100A8
  • S100A9
Bos taurus (cattle)
Vitamin C (ascorbate) metabolism
  • CYB5
  • CYB5A
  • CYB5R3
  • DIA1
  • GLUT1
  • GSTO2
  • SLC23A1
  • SLC23A2
  • SLC2A1
  • SLC2A3
Bos taurus (cattle)
Signaling by ROBO receptors
  • CXCL12
  • CXCR4
  • GPC1
  • ROBO1
  • SLIT2
  • SLIT3
Bos taurus (cattle)
KEAP1-NFE2L2 pathway
  • CUL3
  • KEAP1
  • MAP1ALC3
  • MAP1LC3
  • MAP1LC3B
  • MUL1
  • NFE2L2
  • NPLOC4
  • PRKCI
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SESN1
  • SESN2
  • SQSTM1
  • SUG1
  • TRAP2
  • TRIM21
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UBXN7
  • UFD1
  • VCP
Bos taurus (cattle)
Degradation of DVL
  • CUL3
  • DACT1
  • DVL1
  • DVL2
  • DVL3
  • HECW1
  • KLHL12
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Regulation of RUNX2 expression and activity
  • CUL1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSMF1
  • RPS27A
  • RUNX2
  • SKP1
  • SKP1A
  • SKP2
  • STUB1
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2
  • CUL1
  • GSK3B
  • NFE2L2
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSMF1
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Degradation of GLI1 by the proteasome
  • CUL1
  • GLI1
  • ITCH
  • NUMB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SKP1
  • SKP1A
  • SUFU
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes
  • CTSK
  • CTSL
  • CTSL1
  • SERPINB13
Bos taurus (cattle)
Transport of inorganic cations/anions and amino acids/oligopeptides
  • CTNS
  • EAAT1
  • GLAST
  • GLAST1
  • SAMC
  • SLC1A1
  • SLC1A2
  • SLC1A3
  • SLC1A6
  • SLC1A7
  • SLC25A26
  • SLC32A1
Bos taurus (cattle)
RUNX3 regulates WNT signaling
  • CTNNB1
  • LEF1
  • RUNX3
  • TCF7
  • TCF7L1
  • TCF7L2
Bos taurus (cattle)
Transport of bile salts and organic acids, metal ions and amine compounds
  • CTL2
  • CTL3
  • CTL4
  • SLC14A1
  • SLC14A2
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • SLC44A5
  • SLC47A2
  • SLC5A7
  • TPPT1
  • UT-B
Bos taurus (cattle)
GLI3 is processed to GLI3R by the proteasome
  • CSNK1A1
  • CUL1
  • GLI3
  • GSK3B
  • PRKACA
  • PRKACB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SKP1
  • SKP1A
  • SUFU
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Signaling by CSF3 (G-CSF)
  • CSF3
  • CSF3R
  • GAB2
  • GCSF
  • GRB2
  • JAK1
  • JAK2
  • KRAS
  • LYN
  • PTPN11
  • SHC1
  • SRC
  • SYK
  • TYK2
Bos taurus (cattle)
Inactivation of CSF3 (G-CSF) signaling
  • CSF3
  • CSF3R
  • CUL5
  • ELOC
  • GCSF
  • JAK1
  • JAK2
  • LYN
  • RNF7
  • RPS27A
  • SOCS1
  • SOCS3
  • SRC
  • SYK
  • TCEB1
  • TCEB2
  • TYK2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBC4
  • UBCEP1
  • UBCEP2
  • UBCH4
  • UBCH5B
  • UBE2D1
  • UBE2D2
  • UBE2D3
Bos taurus (cattle)
Interleukin-3, Interleukin-5 and GM-CSF signaling
  • CSF2
  • CSF2RB
  • IL3
  • IL3RA
  • IL5
  • IL5RA
  • JAK2
  • MGF
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PIK3R3
  • PRKACA
  • PTPN11
  • PTPN6
  • SHC1
  • STAT5A
  • STAT5B
  • TEC
  • VAV1
  • YWHAZ
Bos taurus (cattle)
Interleukin receptor SHC signaling
  • CSF2
  • CSF2RB
  • GAB2
  • GRB2
  • IL-2
  • IL2
  • IL2RA
  • IL2RG
  • IL3
  • IL3RA
  • IL5
  • IL5RA
  • INPP5D
  • INPPL1
  • JAK1
  • JAK2
  • JAK3
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PIK3R3
  • PTPN6
  • SHC1
  • SOS1
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024