GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 151 - 175 of 557 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Other interleukin signaling
  • CSF1
  • CSF1R
  • CSF3
  • CSF3R
  • GCSF
  • IFNLR1
  • IL10RB
  • IL34
  • JAK1
  • PRTN3
  • PTPRZ1
  • SDC1
  • SNAP25
  • STX1A
  • STX3
  • STX4
  • STXBP2
  • SYB2
  • TXLNA
  • TYK2
  • VAMP2
Bos taurus (cattle)
Erythropoietin activates RAS
  • CRKL
  • EPO
  • EPOR
  • GRB2
  • IRS2
  • JAK2
  • LYN
  • RAPGEF1
  • SHC1
  • VAV1
Bos taurus (cattle)
CD209 (DC-SIGN) signaling
  • CREBBP
  • EP300
  • NFKB1
  • PRKACA
  • PRKACB
  • RELA
  • RELB
  • RPS6KA5
Bos taurus (cattle)
Nuclear events mediated by NFE2L2
  • CREBBP
  • EP300
  • NFE2L2
  • PRKAA2
Bos taurus (cattle)
Attenuation phase
  • CREBBP
  • DNAJB1
  • EP300
  • FKBP4
  • HSBP1
  • HSC70
  • HSF1
  • HSP70-1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPA1A
  • HSPA1L
  • HSPA2
  • HSPA8
  • HSPC3
  • HSPCA
  • HSPCB
  • PTGES3
Bos taurus (cattle)
LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production
  • CREBBP
  • CTNNB1
  • EP300
  • IRF3
Bos taurus (cattle)
CREB3 factors activate genes
  • CREB3
  • CREB3L3
  • CREBRF
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
Serotonin Neurotransmitter Release Cycle
  • CPLX1
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A2
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYN1
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Norepinephrine Neurotransmitter Release Cycle
  • CPLX1
  • MAOA
  • OCT1
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A2
  • SLC22A1
  • SLC22A2
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
GABA synthesis, release, reuptake and degradation
  • CPLX1
  • DNAJC5
  • GAD1
  • GAD2
  • HSC70
  • HSPA8
  • RAB3A
  • RIMS1
  • SLC32A1
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Hydrolysis of LPC
  • CPLA2
  • LYPLA3
  • PLA2G15
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLBD1
Bos taurus (cattle)
Acyl chain remodelling of PS
  • CPLA2
  • LOC613966
  • LPCAT3
  • LPCAT4
  • MBOAT1
  • OSBPL10
  • OSBPL5
  • OSBPL8
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2R1
Bos taurus (cattle)
Acyl chain remodelling of PC
  • CPLA2
  • LOC613966
  • LPCAT1
  • LPCAT2
  • LPCAT3
  • LPCAT4
  • MBOAT2
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2G6
  • PLA2R1
  • PLBD1
  • PNPLA8
  • TMEM86B
Bos taurus (cattle)
Acyl chain remodelling of PI
  • CPLA2
  • LENG4
  • LOC613966
  • MBOAT7
  • OACT7
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2R1
  • PLBD1
Bos taurus (cattle)
ADP signalling through P2Y purinoceptor 1
  • CPLA2
  • GNA11
  • GNA14
  • GNA15
  • GNAQ
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • MAPK14
  • P2RY1
  • PLA2G4
  • PLA2G4A
  • SRC
Bos taurus (cattle)
Acyl chain remodelling of PG
  • CPLA2
  • CRLS1
  • LOC613966
  • LPCAT1
  • LPCAT4
  • LPGAT1
  • PLA2G12A
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4F
  • PLA2R1
Bos taurus (cattle)
Metal ion SLC transporters
  • CP
  • HEPH
  • SLC11A1
  • SLC11A2
  • SLC30A10
  • SLC40A1
  • SLC41A1
  • SLC41A2
Bos taurus (cattle)
Lectin pathway of complement activation
  • COLEC10
  • COLEC11
  • FCN2
  • MASP1
  • MASP2
  • MBL
Bos taurus (cattle)
Signaling by PDGF
  • COL4A1
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • FURIN
  • PDGFA
  • PDGFB
  • PDGFC
  • PDGFD
  • PDGFRA
  • PDGFRB
  • PLAT
  • PLG
  • PTPN12
  • SPP1
  • THBS1
  • THBS2
  • THBS3
  • THBS4
Bos taurus (cattle)
Activation of Matrix Metalloproteinases
  • COL18A1
  • CTRB1
  • CTSK
  • CTSL
  • CTSL1
  • ELANE
  • FURIN
  • KLK1
  • KLKB1
  • KLNA1
  • LOC100139881
  • LOC112441463
  • LOC112442231
  • LOC509956
  • LOC540321
  • MMP11
  • MMP13
  • MMP14
  • MMP15
  • MMP16
  • MMP17
  • MMP2
  • MMP24
  • MMP25
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PLG
  • PRSS2
  • TIMP2
  • TPSB1
Bos taurus (cattle)
Collagen degradation
  • COL12A1
  • COL13A1
  • COL18A1
  • CTSB
  • CTSD
  • CTSK
  • LOC112441463
  • MMP11
  • MMP12
  • MMP13
  • MMP14
  • MMP15
  • MMP2
  • MMP20
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PHYKPL
  • PRSS2
  • TMPRSS6
Bos taurus (cattle)
Assembly of collagen fibrils and other multimeric structures
  • COL10A1
  • COL11A1
  • COL11A2
  • COL1A1
  • COL1A2
  • COL27A1
  • COL2A1
  • COL3A1
  • COL4A1
  • COL5A1
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A1
  • COL8A2
Bos taurus (cattle)
Collagen chain trimerization
  • COL10A1
  • COL11A1
  • COL11A2
  • COL12A1
  • COL13A1
  • COL14A1
  • COL16A1
  • COL17A1
  • COL18A1
  • COL1A1
  • COL1A2
  • COL20A1
  • COL23A1
  • COL26A1
  • COL27A1
  • COL28A1
  • COL2A1
  • COL3A1
  • COL5A1
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A1
  • COL8A2
Bos taurus (cattle)
TP53 Regulates Metabolic Genes
  • COII
  • COX1
  • COX11
  • COX14
  • COX16
  • COX18
  • COX19
  • COX2
  • COX20
  • COX3
  • COX4
  • COX4I1
  • COX5A
  • COX6A1
  • COX6C
  • COX7A2L
  • COX7B
  • COX7C
  • COX7CP1
  • COXII
  • CYC
  • CYCS
  • DDIT4
  • G6PD
  • GBL
  • GLS
  • GLS2
  • GPI
  • GSR
  • LAMTOR1
  • LAMTOR2
  • LAMTOR3
  • LAMTOR4
  • LAMTOR5
  • LOC100296227
  • LOC783202
  • LRPPRC
  • LST8
  • MLST8
  • MT-CO2
  • MTCO2
  • MTOR
  • NDUFA4
  • PRDX1
  • PRDX2
  • PRDX5
  • PRKAA1
  • PRKAA2
  • PRKAB1
  • PRKAB2
  • PRKAG1
  • PRKAG2
  • PRKAG3
  • RHEB
  • RPTOR
  • RRAGA
  • RRAGB
  • RRAGC
  • RRAGD
  • SCO1
  • SCO2
  • SCOD1
  • SESN1
  • SESN2
  • SESN3
  • SFN
  • SLC38A9
  • SURF1
  • TACO1
  • TIGAR
  • TSC1
  • TXN
  • TXNRD1
  • YWHAB
  • YWHAE
  • YWHAG
  • YWHAH
  • YWHAQ
  • YWHAZ
Bos taurus (cattle)
Trafficking and processing of endosomal TLR
  • CNPY3
  • CTSB
  • CTSK
  • CTSL
  • CTSL1
  • CTSS
  • GRP94
  • HSP90B1
  • HSPC4
  • LGMN
  • TLR3
  • TLR7
  • TLR9
  • TRA1
  • UNC93B1
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024