GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 151 - 175 of 557 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Effects of PIP2 hydrolysis
  • DGKA
  • DGKB
  • DGKD
  • DGKE
  • DGKI
  • DGKK
  • DGKQ
  • DGKZ
  • ITPR1
  • ITPR2
  • ITPR3
  • PRKCD
  • PRKCH
  • PRKCQ
  • TRP6
  • TRPC3
  • TRPC6
  • TRPC7
Bos taurus (cattle)
Eicosanoid ligand-binding receptors
  • OXER1
Bos taurus (cattle)
Elastic fibre formation
  • ELN
  • FBLN5
  • FBN1
  • FBN2
  • FURIN
  • ITGAV
  • ITGB1
  • ITGB3
  • ITGB6
  • LOX
  • LOXL1
  • LOXL2
  • LOXL3
  • LOXL4
  • MFAP5
Bos taurus (cattle)
Electric Transmission Across Gap Junctions
  • GJA10
  • GJA7
  • GJA9
  • GJC1
  • GJD2
  • PANX
  • PANX1
  • PANX2
Bos taurus (cattle)
Elevation of cytosolic Ca2+ levels
  • ITPR1
  • ITPR2
  • ITPR3
  • P2RX1
  • P2RX2
  • P2RX3
  • P2RX4
  • P2RX5
  • P2RX6
  • P2RX7
  • TRP6
  • TRPC3
  • TRPC6
  • TRPC7
Bos taurus (cattle)
Endogenous sterols
  • ADX
  • AHR
  • ARNT
  • ARNT2
  • CYP11A1
  • CYP11B1
  • CYP19A1
  • CYP1B1
  • CYP21
  • CYP21A1
  • CYP21A2
  • CYP27A1
  • CYP39A1
  • CYP46A1
  • CYP4V2
  • CYP51A1
  • CYP7A1
  • FDX1
  • FDX1L
  • FDX2
  • FDXR
  • LOC112449566
  • NCOA1
  • NCOA2
  • NR1H4
  • POMC
  • RXRA
Bos taurus (cattle)
Erythrocytes take up carbon dioxide and release oxygen
  • AQP1
  • CA1
  • CA2
  • CA4
  • CYB5R1
  • CYB5R2
  • CYB5R4
  • CYB5RL
  • HBA
  • HBB
  • RHAG
  • SLC4A1
Bos taurus (cattle)
Erythrocytes take up oxygen and release carbon dioxide
  • AQP1
  • CA1
  • CA2
  • CA4
  • HBA
  • HBB
  • RHAG
  • SLC4A1
Bos taurus (cattle)
Erythropoietin activates Phosphoinositide-3-kinase (PI3K)
  • EPO
  • EPOR
  • GAB1
  • IRS2
  • JAK2
  • LYN
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3CG
  • PIK3R1
  • PIK3R5
Bos taurus (cattle)
Erythropoietin activates RAS
  • CRKL
  • EPO
  • EPOR
  • GRB2
  • IRS2
  • JAK2
  • LYN
  • RAPGEF1
  • SHC1
  • VAV1
Bos taurus (cattle)
Estrogen-dependent gene expression
  • CBFB
  • CCNT1
  • CDK9
  • CITED1
  • CREBBP
  • EP300
  • ERBB4
  • ESR
  • ESR1
  • FKBP4
  • FOXA1
  • GATA3
  • GREB1
  • GTF2A1
  • GTF2A2
  • GTF2F1
  • GTF2F2
  • H2AC12
  • H2AC18
  • H2AC21
  • H2AC6
  • H2AJ
  • H2AV
  • H2AZ2
  • H2B
  • H2BC26
  • H2BC5
  • H3-3A
  • H3-3B
  • H3F3A
  • H3F3B
  • HDAC1
  • HIST1H2BI
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPC3
  • HSPCA
  • HSPCB
  • KAT2B
  • KAT5
  • KDM1A
  • KDM4B
  • LOC528006
  • MED1
  • MSG1
  • NCOA1
  • NCOA2
  • NCOA3
  • NR3A1
  • NR5A2
  • NRIP1
  • PGR
  • POLR2A
  • POLR2B
  • POLR2C
  • POLR2D
  • POLR2E
  • POLR2F
  • POLR2G
  • POLR2H
  • POLR2I
  • POLR2J
  • POLR2K
  • POLR2L
  • PRMT1
  • PTGES3
  • RUNX1
  • SP1
  • TBP
  • TLE3
  • USF1
  • USF2
  • YY1
  • ZNF217
Bos taurus (cattle)
Events associated with phagocytolytic activity of PMN cells
  • LPO
  • MPO
Bos taurus (cattle)
Extra-nuclear estrogen signaling
  • AREG
  • BTC
  • CALM
  • CAV1
  • CAV2
  • EGFR
  • EPGN
  • EREG
  • ESR
  • ESR1
  • ESR2
  • GNAI1
  • GNAI2
  • GNAI3
  • GNAT3
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • HBEGF
  • HSP90A
  • HSP90AA1
  • HSPCA
  • IGF1R
  • MMP2
  • MMP3
  • MMP7
  • MMP9
  • NOS3
  • NR3A1
  • NR3A2
  • PIK3CA
  • PIK3R1
  • PIK3R2
  • PIK3R3
  • PRMT1
  • PTK2
  • S1PR3
  • SHC1
  • SPHK1
  • SRC
  • STRN
  • TGFA
  • ZDHHC21
  • ZDHHC7
Bos taurus (cattle)
Extracellular matrix organization
  • FN1
Bos taurus (cattle)
Extrinsic Pathway of Fibrin Clot Formation
  • F10
  • F3
  • F7
  • F9
  • TFPI
Bos taurus (cattle)
FBXL7 down-regulates AURKA during mitotic entry and in early mitosis
  • AIK
  • AIRK1
  • ARK1
  • AURA
  • AURKA
  • AYK1
  • BTAK
  • CUL1
  • FBXL18
  • FBXL7
  • IAK1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SKP1
  • SKP1A
  • STK15
  • STK6
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
FCERI mediated NF-kB activation
  • BCL10
  • CARD11
  • CDC34
  • CHUK
  • CUL1
  • FBXW11
  • IKBKB
  • IKBKG
  • IKKA
  • LYN
  • MALT1
  • MAP3K7
  • NEMO
  • NFKB1
  • NFKBIA
  • PRKCQ
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RELA
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TAB1
  • TAB2
  • TAB3
  • TRAF6
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBC4
  • UBCEP1
  • UBCEP2
  • UBCH4
  • UBCH5B
  • UBE2D1
  • UBE2D2
  • bIkBa
Bos taurus (cattle)
FCGR activation
  • CD247
  • CD3G
  • FCGR1A
  • FCGR2B
  • FCGR3
  • FCGR3A
  • FCGRIII
  • FGR
  • FYN
  • LYN
  • SRC
  • SYK
  • YES1
Bos taurus (cattle)
FGFR1b ligand binding and activation
  • AFGF
  • FGF1
  • FGF10
  • FGF2
  • FGF3
  • FGF5C
  • FGFA
  • FGFR1
  • HBGF-1
Bos taurus (cattle)
FGFR1c and Klotho ligand binding and activation
  • FGF23
  • FGFR1
  • KL
Bos taurus (cattle)
FGFR1c ligand binding and activation
  • AFGF
  • FGF1
  • FGF17
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF5
  • FGF6
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR1
  • Fgf4
  • HBGF-1
Bos taurus (cattle)
FGFR2b ligand binding and activation
  • AFGF
  • FGF1
  • FGF10
  • FGF2
  • FGF3
  • FGF5B
  • FGF5C
  • FGF7
  • FGFA
  • FGFBP
  • FGFBP1
  • FGFR2
  • HBGF-1
Bos taurus (cattle)
FGFR2c ligand binding and activation
  • AFGF
  • FGF1
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF6
  • FGF6A
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR2
  • Fgf4
  • HBGF-1
Bos taurus (cattle)
FGFR3c ligand binding and activation
  • AFGF
  • FGF1
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF6A
  • FGF8
  • FGF9
  • FGFA
  • FGFR3
  • Fgf4
  • GALNT3
  • HBGF-1
Bos taurus (cattle)
FGFRL1 modulation of FGFR1 signaling
  • FGF10
  • FGF17
  • FGF18
  • FGF2
  • FGF23
  • FGF3
  • FGF4
  • FGF5
  • FGF5C
  • FGF6A
  • FGF8
  • FGFRL1
  • Fgf4
Bos taurus (cattle)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024