GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 176 - 200 of 557 in total
Pathway Name Protein Name UniProt ID ▲ Gene Symbol Organism GlyTouCan ID
Glutathione conjugation
  • AKR1A1
  • ESD
  • GSTA1
  • GSTA2
  • GSTA4
  • GSTA5
  • GSTK1
  • GSTM1
  • GSTM3
  • GSTM4
  • GSTO2
  • GSTP1
  • GSTT1
  • HPGDS
  • LOC100295687
  • MGST1
  • MGST2
  • MGST3
Bos taurus (cattle)
APAP ADME
  • ABCC1
  • ABCC2
  • ABCC3
  • ABCC5
  • ABCG2
  • ACY1
  • CNDP2
  • GGT1
  • GGT5
  • GGT7
  • GGTL3
  • GSTM4
  • GSTP1
  • GSTT1
  • LOC100138004
  • LOC100138908
  • LOC100296421
  • LOC100300896
  • LOC515333
  • MRP1
  • NAT1
  • STP
  • SULT1A1
  • SULT1E1
  • SULT2A1
  • UGT2B10
Bos taurus (cattle)
Detoxification of Reactive Oxygen Species
  • AOP1
  • AOP2
  • CAT
  • CCS
  • CYBA
  • CYBB
  • CYC
  • CYCS
  • ERO1A
  • ERO1L
  • GPX
  • GPX1
  • GPX3
  • GPX5
  • GPX7
  • GPX8
  • GSR
  • GSTP1
  • NCF1
  • NCF2
  • NCF4
  • NOX4
  • NOX5
  • NUDT2
  • P4HB
  • PHGPX
  • PRDX1
  • PRDX2
  • PRDX3
  • PRDX5
  • PRDX6
  • SOD1
  • SOD2
  • SOD3
  • TRXR2
  • TXN
  • TXN2
  • TXNRD1
  • TXNRD2
Bos taurus (cattle)
Negative regulation of FGFR2 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF5B
  • FGF5C
  • FGF6
  • FGF6A
  • FGF7
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR2
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Negative regulation of FGFR1 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF10
  • FGF17
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF5
  • FGF5C
  • FGF6
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR1
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • KL
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Regulation of KIT signaling
  • CBL
  • FYN
  • GRB2
  • KIT
  • KITLG
  • LCK
  • LYN
  • PTPN6
  • SCF
  • SH2B2
  • SOS1
  • SRC
  • YES1
Bos taurus (cattle)
Interleukin-6 signaling
  • CBL
  • IL6
  • IL6R
  • IL6ST
  • JAK1
  • JAK2
  • PTPN11
  • SOCS3
  • STAT1
  • STAT3
  • TYK2
Bos taurus (cattle)
Negative regulation of FGFR3 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF6A
  • FGF8
  • FGF9
  • FGFA
  • FGFR3
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Adherens junctions interactions
  • AFDN
  • ANG2
  • CADM1
  • CADM2
  • CADM3
  • CDH1
  • CDH10
  • CDH11
  • CDH12
  • CDH13
  • CDH15
  • CDH17
  • CDH18
  • CDH2
  • CDH24
  • CDH3
  • CDH4
  • CDH5
  • CDH6
  • CDH7
  • CDH8
  • CTNNA1
  • CTNNB1
  • CTNND1
  • JUP
  • NECTIN1
  • NECTIN2
  • NECTIN3
  • NECTIN4
  • PVRL4
  • RAA2
Bos taurus (cattle)
HS-GAG degradation
  • AGRN
  • GLB1
  • GLB1L
  • GLB1L2
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GUSB
  • HPSE
  • HPSE2
  • IDS
  • IDUA
  • NAGLU
  • SDC1
  • SDC2
  • SDC4
  • SGSH
Bos taurus (cattle)
Caspase-mediated cleavage of cytoskeletal proteins
  • ADD1
  • CASP3
  • CASP6
  • CASP7
  • CASP8
  • GAS2
  • GSN
  • PLEC
  • SORBS2
  • SPTAN1
  • VIM
Bos taurus (cattle)
Nuclear signaling by ERBB4
  • APH1A
  • APH1B
  • ERBB4
  • ESR
  • ESR1
  • MGF
  • NCSTN
  • NR3A1
  • PEN2
  • PSEN1
  • PSEN2
  • PSENEN
  • SRC
  • STAT5A
  • WWOX
  • YAP1
Bos taurus (cattle)
EPH-ephrin mediated repulsion of cells
  • APH1A
  • APH1B
  • EFNB1
  • EFNB2
  • EFNB3
  • EPHB1
  • EPHB2
  • EPHB3
  • EPHB4
  • EPHB6
  • FYN
  • LYN
  • MMP2
  • MMP9
  • NCSTN
  • PEN2
  • PSEN1
  • PSEN2
  • PSENEN
  • SRC
  • VAV2
  • VAV3
  • YES1
Bos taurus (cattle)
Regulated proteolysis of p75NTR
  • ADAM17
  • APH1A
  • APH1B
  • NCSTN
  • NFKB1
  • NGFR
  • PEN2
  • PSEN1
  • PSEN2
  • PSENEN
  • RELA
  • TRAF6
Bos taurus (cattle)
RET signaling
  • ARTN
  • DOK1
  • DOK2
  • DOK4
  • DOK5
  • DOK6
  • FRS2
  • GAB1
  • GAB2
  • GDNF
  • GFRA1
  • GFRA2
  • GFRA3
  • GFRA4
  • GRB10
  • GRB2
  • GRB7
  • IRS2
  • MAPK7
  • NRTN
  • PDLIM7
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PIK3R3
  • PLCG1
  • PRKACA
  • PRKACB
  • PTPN11
  • RAP1GAP
  • RET
  • SHANK3
  • SHC1
  • SHC3
  • SOS1
  • SRC
Bos taurus (cattle)
Insulin receptor signalling cascade
  • GRB10
  • GRB2
  • INS
  • INSR
  • SHC1
  • SOS1
Bos taurus (cattle)
NF-kB is activated and signals survival
  • IKBKB
  • IRAK1
  • NFKB1
  • NFKBIA
  • NGF
  • NGFR
  • RELA
  • RPS27A
  • SQSTM1
  • TRAF6
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • bIkBa
Bos taurus (cattle)
Hyaluronan biosynthesis and export
  • ABCC5
  • CEMIP
  • DERPC
  • HAS1
  • HAS2
Bos taurus (cattle)
Regulation of IFNA/IFNB signaling
  • IF1AG1
  • IF1AG8
  • IFNAC
  • IFNAR
  • IFNAR1
  • IFNAR2
  • JAK1
  • LOC100335490
  • LOC523244
  • LOC618947
  • LOC783912
  • PTPN1
  • PTPN11
  • PTPN6
  • STAT1
  • STAT2
  • TYK2
Bos taurus (cattle)
Interferon alpha/beta signaling
  • ABCE1
  • IF1AG1
  • IF1AG8
  • IFNAC
  • IFNAR
  • IFNAR1
  • IFNAR2
  • IRF9
  • ISGF3G
  • JAK1
  • KPNA1
  • KPNB1
  • LOC100335490
  • LOC523244
  • LOC618947
  • LOC783912
  • RNASEL
  • RPS27A
  • SOCS1
  • SOCS3
  • STAT1
  • STAT2
  • TYK2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
SUMOylation of intracellular receptors
  • AD4BP
  • AR
  • ESR
  • ESR1
  • FTZF1
  • HDAC4
  • LXRA
  • LXRB
  • NR1H2
  • NR1H3
  • NR1H4
  • NR1I2
  • NR3A1
  • NR3C1
  • NR3C2
  • NR5A1
  • NR5A2
  • PGR
  • PIAS1
  • PIAS2
  • PIAS3
  • PIAS4
  • PPARA
  • RARA
  • RXRA
  • SMT3B
  • SUMO2
  • SUMO3
  • THRA
  • THRB
  • VDR
Bos taurus (cattle)
Transferrin endocytosis and recycling
  • ATP6A1
  • ATP6AP1
  • ATP6B1
  • ATP6B2
  • ATP6C
  • ATP6D
  • ATP6E
  • ATP6G
  • ATP6G1
  • ATP6H
  • ATP6IP1
  • ATP6N1B
  • ATP6S1
  • ATP6S14
  • ATP6V0A1
  • ATP6V0A2
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E
  • ATP6V0E1
  • ATP6V0E2
  • ATP6V1A
  • ATP6V1A1
  • ATP6V1B1
  • ATP6V1B2
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1E2
  • ATP6V1F
  • ATP6V1G1
  • ATP6V1G2
  • ATP6V1G3
  • ATP6V1H
  • HFE
  • LOC101904667
  • MCOLN1
  • STEAP3
  • STEAP4
  • TCIRG1
  • TF
  • TFR2
  • TFRC
  • VATC
  • VATF
  • VPATPD
Bos taurus (cattle)
Dopamine Neurotransmitter Release Cycle
  • CASK
  • CPLX1
  • LIN7A
  • LIN7B
  • LIN7C
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A2
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYN1
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Synthesis of very long-chain fatty acyl-CoAs
  • ACSF3
  • ACSL1
  • ACSL3
  • ACSL4
  • ACSL5
  • ACSL6
  • ELOVL2
  • ELOVL3
  • ELOVL5
  • ELOVL6
  • ELOVL7
  • GPSN2
  • HACD1
  • HACD2
  • HACD3
  • HACD4
  • HSD17B12
  • HSD17B3
  • LOC789567
  • MGC139109
  • PTPLAD1
  • SRD5A2L2
  • TECR
  • TECRL
Bos taurus (cattle)
Glutamate Neurotransmitter Release Cycle
  • ARL6IP5
  • CPLX1
  • EAAT1
  • GLAST
  • GLAST1
  • GLS
  • GLS2
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • PRAF3
  • RAB3A
  • RIMS1
  • SLC17A7
  • SLC1A1
  • SLC1A2
  • SLC1A3
  • SLC1A6
  • SLC1A7
  • SLC38A2
  • SNAP25
  • SNAT2
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
  • VGLUT1
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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