GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **201 - 225** of **557** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol ▲	Organism	GlyTouCan ID
Lysosome Vesicle Biogenesis	ADP-ribosylation factor 1 AP complex subunit beta AP complex subunit beta AP complex subunit sigma AP-1 complex subunit gamma AP-1 complex subunit gamma AP-1 complex subunit mu-1 AP-1 complex subunit mu-2 AP-1 complex subunit sigma-1A AP-1 complex subunit sigma-2 AP-4 complex subunit mu-1 AP-4 complex subunit sigma-1 Adaptor related protein complex 4 subunit epsilon 1 Amyloid-beta A4 protein Beta-arrestin-1 Biogenesis of lysosome-related organelles complex 1 subunit 1 Cathepsin Z Cation-dependent mannose-6-phosphate receptor Charged multivesicular body protein 2a Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Clavesin-1 Clavesin-2 Deoxyribonuclease-2-alpha Hepatocyte growth factor-regulated tyrosine kinase substrate N-acetylglucosamine-6-sulfatase SH3 domain containing GRB2 like 2, endophilin A1 Thioredoxin domain containing 5 Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 8	A0A3Q1LMK0 A0A3Q1LUG2 A0A3Q1LUG9 A0A3Q1LWC6 A0A3Q1M481 A0A3Q1M952 E1BE20 E1BHP4 E1BNA3 F1MXZ0 F1MZ33 F6QYT8 P04973 P04975 P05689 P11456 P17870 P49951 P63026 P84080 Q08DX1 Q0V8S0 Q1JQ98 Q29RY8 Q2KJ81 Q2NKW0 Q3SYW1 Q3T0U5 Q3T0Y8 Q3ZBB6 Q3ZBS3	AP1B1 AP1G1 AP1G2 AP1M1 AP1M2 AP1S1 AP1S2 AP1S3 AP4B1 AP4E1 AP4M1 AP4S1 APP ARF1 ARRB1 BLOC1S1 CHMP2A CLTA CLTB CLTC CLTLB CLVS1 CLVS2 CTSZ DNASE2 GNS HGS M6PR SH3GL2 SYB2 TXNDC5 VAMP2 VAMP8	Bos taurus (cattle)
Ovarian tumor domain proteases	APC regulator of WNT signaling pathway Cellular tumor antigen p53 Cyclin-dependent kinase 1 Estrogen receptor NF-kappa-B essential modulator Nucleotide-binding oligomerization domain-containing protein 2 Phosphatase and tensin homolog Polyubiquitin-B Polyubiquitin-C Receptor (TNFRSF)-interacting serine-threonine kinase 1 Receptor-interacting serine/threonine-protein kinase 2 Ring finger protein 128 TNF receptor-associated factor 6 TNF receptor-associated factor TNFAIP3 interacting protein 1 TNFAIP3 interacting protein 2 TNFAIP3 interacting protein 3 Transforming protein RhoA Transitional endoplasmic reticulum ATPase Ubiquitin thioesterase OTU1 Ubiquitin thioesterase ZRANB1 Ubiquitin thioesterase Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1	A0A3Q1LMC7 A0A3S5ZPJ2 A6QP16 E1B9S7 E1BBH2 E1BCH9 E1BDM3 E1BKS3 F1MCR4 F1MDX9 F1MZ13 F1MZJ2 G3N2J6 G3X757 P0CG53 P0CH28 P48734 P49884 P61585 P62992 P63048 P67939 Q05B57 Q2TA10 Q3SZJ2 Q3SZK6 Q3T0Y1 Q3ZCC3 Q6E804 Q95KU9	APC ARHA CARD15 CDC2 CDK1 CDKN1 ESR ESR1 IKBKG NEMO NOD2 NR3A1 OTUB1 OTUB2 OTUD3 OTUD7A OTUD7B PTEN RHO12 RHOA RIPK1 RIPK2 RNF128 RPS27A TNIP1 TNIP2 TNIP3 TP53 TRAF3 TRAF6 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 UBE2D1 VCP VCPIP1 YOD1 ZRANB1	Bos taurus (cattle)
Apoptotic cleavage of cellular proteins	APC regulator of WNT signaling pathway B-cell receptor-associated protein Baculoviral IAP repeat containing 2 Caspase 7 Caspase 8 Caspase-3 Caspase-6 Claspin DNA-binding protein SATB Focal adhesion kinase 1 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Protein kinase C delta type Protein kinase C Rho-associated protein kinase Tyrosine-protein kinase non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A0A3Q1LF69 A0A3Q1LMC7 A0A3Q1MRR6 A0A3Q1N3K3 A0A3Q1N508 A2VE07 A7MB41 E1BMG4 F1MB04 F1MD58 F1MF50 F1N081 G3X680 G3X702 G3X822 Q2LGB8 Q5E9F1	APC BCAP31 BIRC2 BMX CASP3 CASP6 CASP7 CASP8 CLSPN FNTA PRKCD PRKCQ PTK2 ROCK1 SATB1 STK24 STK26	Bos taurus (cattle)
EPH-ephrin mediated repulsion of cells	72 kDa type IV collagenase EPH receptor B6 Ephrin B2 Ephrin B3 Ephrin type-B receptor 3 Ephrin-B1 Gamma-secretase subunit APH-1 Gamma-secretase subunit APH-1 Gamma-secretase subunit PEN-2 Matrix metalloproteinase-9 Nicastrin Presenilin-1 Presenilin-2 Tyrosine-protein kinase Fyn Tyrosine-protein kinase Tyrosine-protein kinase Tyrosine-protein kinase Vav guanine nucleotide exchange factor 2 Vav guanine nucleotide exchange factor 3 receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase	A0A3Q1LNM1 A0A3Q1LXH4 A0A3Q1MBH7 A0A3Q1MDC6 A0A3Q1MQP9 A0JNB0 A1L570 A7MB57 E1BBD2 E1BIE4 E1BIM8 F1MII5 F1MKH8 F1ML02 F1N0M5 F1N261 F1N3R6 F1N5D4 P52176 Q5G235 Q9XT96 Q9XT97	APH1A APH1B EFNB1 EFNB2 EFNB3 EPHB1 EPHB2 EPHB3 EPHB4 EPHB6 FYN LYN MMP2 MMP9 NCSTN PEN2 PSEN1 PSEN2 PSENEN SRC VAV2 VAV3 YES1	Bos taurus (cattle)
Nuclear signaling by ERBB4	Estrogen receptor Gamma-secretase subunit APH-1 Gamma-secretase subunit APH-1 Gamma-secretase subunit PEN-2 Nicastrin Presenilin-1 Presenilin-2 Receptor protein-tyrosine kinase Signal transducer and activator of transcription 5A Tyrosine-protein kinase WW domain-containing oxidoreductase Yes1 associated transcriptional regulator	A0A3Q1LNM1 A0A3Q1LVN4 A0A3Q1MBH7 A0A3Q1MDC6 A0A3Q1MKB4 E1BIM8 F1MK73 P49884 Q5G235 Q95115 Q9XT96 Q9XT97	APH1A APH1B ERBB4 ESR ESR1 MGF NCSTN NR3A1 PEN2 PSEN1 PSEN2 PSENEN SRC STAT5A WWOX YAP1	Bos taurus (cattle)
Chylomicron remodeling	Apolipoprotein A-I Apolipoprotein A-II Apolipoprotein A-IV Apolipoprotein A-V Apolipoprotein B Apolipoprotein C-II Apolipoprotein C-III Apolipoprotein E Glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 Lipoprotein lipase	A0A140T881 A0A3Q1MPP4 A4FUZ9 E1BNR0 F1N3Q7 P11151 P15497 P19034 P19035 P81644	APOA1 APOA2 APOA4 APOA5 APOB APOC2 APOC3 APOE GPIHBP1 LPL	Bos taurus (cattle)
Chylomicron assembly	Apolipoprotein A-I Apolipoprotein A-II Apolipoprotein A-IV Apolipoprotein B Apolipoprotein C-II Apolipoprotein C-III Apolipoprotein E Microsomal triglyceride transfer protein large subunit Protein disulfide-isomerase Small COPII coat GTPase SAR1B	A0A140T881 E1BNR0 F1MDA1 F1N3Q7 F6Q9Q9 P15497 P19034 P19035 P81644 Q3T0T7	APOA1 APOA2 APOA4 APOB APOC2 APOC3 APOE MTTP P4HB SAR1B	Bos taurus (cattle)
Heme signaling	Apolipoprotein A-I Apolipoprotein B BTB domain and CNC homolog 1 Exportin 1 Hemoglobin subunit alpha Hemoglobin subunit beta Lymphocyte antigen 96 MAF bZIP transcription factor K Progesterone receptor membrane component 2 Proton-coupled folate transporter Toll-like receptor 4	C4T7Z1 E1BB01 E1BE98 E1BJL3 E1BNR0 F6QJJ8 P01966 P02070 P15497 Q05B81 Q6WCD5	APOA1 APOB BACH1 HBA HBB HCP1 LY96 MAFK MD-2 PCFT PGRMC2 SLC46A1 TLR4 XPO1	Bos taurus (cattle)
Scavenging by Class B Receptors	Apolipoprotein A-I Apolipoprotein B Platelet glycoprotein 4 Scavenger receptor class B member 1	E1BNR0 O18824 P15497 P26201	APOA1 APOB CD36 PAS4 SCARB1	Bos taurus (cattle)
Chylomicron clearance	Apolipoprotein B Apolipoprotein E Hepatic triacylglycerol lipase LDLRAP1 protein Low-density lipoprotein receptor	A0A140T881 A4IFV0 E1BNR0 P01131 Q3SZ79	APOB APOE LDLR LDLRAP1 LIPC	Bos taurus (cattle)
Regulation of TLR by endogenous ligand	Apolipoprotein B Fibrinogen alpha chain Fibrinogen beta chain Gasdermin D Gasdermin E High mobility group protein B1 Lipopolysaccharide-binding protein Lymphocyte antigen 96 Monocyte differentiation antigen CD14 Platelet glycoprotein 4 Protein S100-A1 Protein S100-A8 Protein S100-A9 Toll like receptor 7 Toll-like receptor 4 Toll-like receptor	A0A3Q1MD51 A0A3Q1MG04 A0A3Q1MK24 A6QNL0 C4T7Z1 E1BFC3 E1BNR0 F1MHS5 F1MNN7 F1MV95 F6QND5 P02639 P10103 P26201 P28782 Q6WCD5	APOB CD14 CD36 FGA FGB GSDMD GSDME HMG1 HMGB1 LBP LY96 MD-2 PAS4 S100A1 S100A8 S100A9 TLR4 TLR6 TLR7	Bos taurus (cattle)
Scavenging by Class A Receptors	Apolipoprotein B Collectin-11 Collectin-12 MBL associated serine protease 1	A6QP79 E1BNR0 F1MVS9 Q17QH6	APOB CLP1 COLEC11 COLEC12 MASP1	Bos taurus (cattle)	G27025MB G70323CJ G82576YO
Scavenging by Class H Receptors	Apolipoprotein B SPARC Stabilin 1 Stabilin 2	E1BNJ1 E1BNR0 F1MYW1 P13213	APOB SPARC STAB1 STAB2	Bos taurus (cattle)
TNFs bind their physiological receptors	A proliferation-inducing ligand B-cell activating factor CD27 molecule CD70 molecule EDAR associated death domain Ectodysplasin A receptor Ectodysplasin A Lymphotoxin-alpha TNF receptor superfamily member 13B TNF receptor superfamily member 17 TNF receptor superfamily member 1B TNF receptor superfamily member 25 TNF receptor superfamily member 4 TNF receptor superfamily member 8 TNF receptor superfamily member 9 TNF superfamily member 14 TNF superfamily member 15 TNF superfamily member 4 TNF superfamily member 8 TNF superfamily member 9 TNFRSF6B protein Tumor necrosis factor ligand superfamily member Tumor necrosis factor receptor superfamily member 11B Tumor necrosis factor receptor superfamily member 1A Uncharacterized protein LOC768081	A0A3Q1LIC4 A0A3Q1M5M3 A0A3Q1M673 A0A3Q1MQ33 A0A452DII6 A5D7R1 A6QPW7 B0LKN7 E1B972 E1BBS7 E1BF06 E1BGY4 E1BIP0 E1BPZ2 F1MGQ7 F1MU29 F1MXW8 F1N0K4 F1N0U5 F1N4E2 G3MZW3 Q06600 Q08DT5 Q3MHI9 Q3ZBM0	APRIL CD27 CD70 EDA EDAR EDARADD LOC768081 LTA TNFB TNFRSF11B TNFRSF13B TNFRSF17 TNFRSF1A TNFRSF1B TNFRSF25 TNFRSF4 TNFRSF6B TNFRSF8 TNFRSF9 TNFSF1 TNFSF11 TNFSF13 TNFSF13B TNFSF14 TNFSF15 TNFSF18 TNFSF4 TNFSF8 TNFSF9 TNLG1B TNLG1D TNLG7A TNLG8A	Bos taurus (cattle)
Passive transport by Aquaporins	Aquaporin 10 Aquaporin 5 Aquaporin 7 Aquaporin 8 Aquaporin 9 Aquaporin-1 Aquaporin-2 Aquaporin-3 Aquaporin-4 Aquaporin Aquaporin Lens fiber major intrinsic protein	A0A3Q1LWN9 A0A3S5ZPM1 E1BDW5 F1MNJ1 F1N1C3 F1N3R5 F1N7X5 O77750 P06624 P47865 P79099 Q08DE6	AQP1 AQP10 AQP11 AQP12 AQP2 AQP3 AQP4 AQP5 AQP6 AQP7 AQP8 AQP9 MIP	Bos taurus (cattle)
Vasopressin regulates renal water homeostasis via Aquaporins	Aquaporin-1 Aquaporin-2 Aquaporin-3 Aquaporin-4 Arginine vasopressin G protein subunit beta 3 G protein subunit gamma 13 GNB4 protein Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 Guanine nucleotide-binding protein G(T) subunit gamma-T1 Guanine nucleotide-binding protein subunit beta-5 Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Myosin VB Protein kinase cAMP-dependent type I regulatory subunit beta RAB11 family interacting protein 2 Ras-related protein Rab-11A Vasopressin V2 receptor cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase type I-alpha regulatory subunit cAMP-dependent protein kinase type II-alpha regulatory subunit cAMP-dependent protein kinase	A0A3Q1LXY0 A0A3Q1MCI6 A0A3Q1NGS8 A0A3S5ZPL0 A0A452DJE2 A4IFL6 A5PKD6 E1B8Q3 F1MMQ6 F1MYW8 F2Z4D5 G3X6N7 O77750 P00514 P00515 P00517 P02698 P11017 P30671 P47865 P48044 P50154 P62871 P63212 P63214 P63217 P79099 Q08DE6 Q28024 Q3SZ98 Q5E9F0	AQP1 AQP2 AQP3 AQP4 AVP AVPR2 GNB1 GNB2 GNB3 GNB4 GNB5 GNG10 GNG11 GNG12 GNG13 GNG2 GNG3 GNG4 GNG5 GNG7 GNG8 GNGT1 GNGT12 GNGT2 GNGT3 GNGT5 GNGT7 GNGT8 MYO5B PRKACA PRKACB PRKAR1A PRKAR1B PRKAR2A RAB11A RAB11FIP2	Bos taurus (cattle)
Erythrocytes take up carbon dioxide and release oxygen	Ammonium transporter Rh type A Anion exchange protein Aquaporin-1 Carbonic anhydrase 1 Carbonic anhydrase 4 Carbonic anhydrase Cytochrome b5 reductase 4 Hemoglobin subunit alpha Hemoglobin subunit beta NADH-cytochrome b5 reductase 1 NADH-cytochrome b5 reductase 2 NADH-cytochrome b5 reductase	A0A3Q1LIS5 A0A3Q1MXD6 F1MKX8 F1N0H3 F6QPG2 P01966 P02070 P47865 Q1LZA1 Q32LH7 Q3MHW9 Q95323	AQP1 CA1 CA2 CA4 CYB5R1 CYB5R2 CYB5R4 CYB5RL HBA HBB RHAG SLC4A1	Bos taurus (cattle)
Erythrocytes take up oxygen and release carbon dioxide	Ammonium transporter Rh type A Anion exchange protein Aquaporin-1 Carbonic anhydrase 1 Carbonic anhydrase 4 Carbonic anhydrase Hemoglobin subunit alpha Hemoglobin subunit beta	F1MKX8 F1N0H3 F6QPG2 P01966 P02070 P47865 Q1LZA1 Q95323	AQP1 CA1 CA2 CA4 HBA HBB RHAG SLC4A1	Bos taurus (cattle)
COPI-dependent Golgi-to-ER retrograde traffic	ADP ribosylation factor GTPase activating protein 1 ADP-ribosylation factor 1 ADP-ribosylation factor 3 ADP-ribosylation factor 4 ADP-ribosylation factor GTPase-activating protein 2 ADP-ribosylation factor GTPase-activating protein 3 ADP-ribosylation factor BCL2 interacting protein 1 Beta-soluble NSF attachment protein Centromere protein E Coatomer subunit alpha Coatomer subunit beta' Coatomer subunit beta Coatomer subunit delta Coatomer subunit epsilon Coatomer subunit gamma-2 Coatomer subunit gamma Coatomer subunit zeta-1 Coatomer subunit zeta ER lumen protein-retaining receptor 1 ER lumen protein-retaining receptor 2 ER lumen protein-retaining receptor Gamma-soluble NSF attachment protein Golgi brefeldin A resistant guanine nucleotide exchange factor 1 Kinesin family member 11 Kinesin family member 13B Kinesin family member 15 Kinesin family member 16B Kinesin family member 1B Kinesin family member 1C Kinesin family member 20B Kinesin family member 21A Kinesin family member 21B Kinesin family member 23 Kinesin family member 26B Kinesin family member 5A Kinesin light chain Kinesin light chain Kinesin light chain Kinesin light chain Kinesin-like protein KIF20A Kinesin-like protein Kinesin-like protein Kinesin-like protein Kinesin-like protein Kinesin-like protein Kinesin-like protein Kinesin-like protein Kinesin-like protein NBAS subunit of NRZ tethering complex NSF attachment protein alpha RAD50 interactor 1 Rac GTPase activating protein 1 Ras-related protein Rab-1A Surfeit locus protein 4 Syntaxin-18 TMED7 protein Transmembrane emp24 domain-containing protein 10 Transmembrane emp24 domain-containing protein 9 Transmembrane p24 trafficking protein 3 Vesicle transport protein USE1 Vesicle-fusing ATPase Vesicle-trafficking protein SEC22b ZW10, kinetochore associated, homolog (Drosophila) small monomeric GTPase	A0A140T856 A0A140T886 A0A3Q1LPC5 A0A3Q1LSE5 A0A3Q1LWK0 A0A3Q1LX75 A0A3Q1LXI8 A0A3Q1LYE2 A0A3Q1M0P4 A0A3Q1M5V0 A0A3Q1M736 A0A3Q1MF39 A0A3Q1MG61 A0A3Q1MIL7 A0A3Q1MMA1 A0A3Q1MN62 A0A3Q1MPX6 A0A3Q1MR65 A0A3Q1MWA3 A0A3Q1MWH8 A0A3Q1MXL6 A0A3Q1N141 A0A3Q1N147 A0JN39 A2VE21 A4IFP7 A4IFT6 A5PJR7 A6H7H2 A7YY49 E1BAT8 E1BC41 E1BC46 E1BF29 E1BG49 E1BGB0 E1BJK5 E1BJP2 E1BKE3 E1BMB8 E1BMC4 F1MI54 F1MJ53 F1MNK8 F1MWR7 F1N0Y3 F6Q334 F6QDZ3 F6RPS1 P33946 P35604 P35605 P53619 P81126 P84080 Q08DH4 Q0P5L6 Q17R07 Q28104 Q29RT6 Q2KJ37 Q3SZF2 Q3T133 Q5E971 Q5E9I6	ARCN1 ARF1 ARF3 ARF4 ARF5 ARFGAP1 ARFGAP2 ARFGAP3 BNIP1 CENPE COPA COPB1 COPB2 COPD COPE COPE1 COPG1 COPG2 COPZ COPZ1 COPZ2 GBF1 KDELR KDELR1 KDELR2 KDELR3 KIF11 KIF12 KIF13B KIF15 KIF16B KIF18B KIF1B KIF1C KIF20A KIF20B KIF21A KIF21B KIF22 KIF23 KIF25 KIF26B KIF28 KIF2B KIF3A KIF5A KIF5B KLC1 KLC2 KLC3 KLC4 NAPA NAPB NAPG NBAS NSF RAB1A RAB1B RACGAP1 RINT1 SEC22B SNAPB STX18 SURF4 TMED10 TMED3 TMED7 TMED9 TMP21 USE1 ZW10	Bos taurus (cattle)
Extra-nuclear estrogen signaling	72 kDa type IV collagenase Amphiregulin Betacellulin Calmodulin-like Caveolin-1 Caveolin-2 EF-hand domain-containing protein Epiregulin Epithelial mitogen Estrogen receptor beta Estrogen receptor Focal adhesion kinase 1 G protein subunit beta 3 G protein subunit gamma 13 GNB4 protein Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 Guanine nucleotide-binding protein G(T) subunit gamma-T1 Guanine nucleotide-binding protein G(i) subunit alpha-1 Guanine nucleotide-binding protein G(i) subunit alpha-2 Guanine nucleotide-binding protein G(i) subunit alpha-3 Guanine nucleotide-binding protein G(t) subunit alpha-3 Guanine nucleotide-binding protein subunit beta-5 Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Heat shock protein HSP 90-alpha Matrix metallopeptidase 7 Matrix metalloproteinase-9 Nitric oxide synthase Palmitoyltransferase ZDHHC21 Palmitoyltransferase Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphoinositide-3-kinase regulatory subunit 3 Proheparin-binding EGF-like growth factor Receptor protein-tyrosine kinase S1PR3 protein SHC-transforming protein 1 Sphingosine kinase 1 Striatin Stromelysin-1 Transforming growth factor alpha Tyrosine-protein kinase receptor Tyrosine-protein kinase type I protein arginine methyltransferase	A0A3Q1LSD1 A0A3Q1M7J4 A0A3Q1MGW7 A0A3Q1MHB0 A0A3Q1MR28 A0A3Q1MR38 A0A3Q1N508 A0A3Q1NGS8 A0A3S5ZPL0 A2VDT6 A2VE27 A4IFL6 A5PKD6 A6QR17 A7MBH9 E1B8Q3 E1BBE2 E1BDM2 E1BIM8 E1BIN8 F1MDQ5 F1MEV4 F1MKH8 F1MLH6 F1MTX6 F1MU56 F1MXZ6 F1MYW8 F1N6U3 G1K218 P02698 P0C7Q4 P11017 P23726 P23727 P30671 P32871 P49884 P50154 P52176 P62871 P63097 P63212 P63214 P63217 P79132 Q0IIE2 Q28024 Q3SZ98 Q3ZCA7 Q5E9F0 Q66WT7 Q76LV2 Q9XSB5	AREG BTC CALM CAV1 CAV2 EGFR EPGN EREG ESR ESR1 ESR2 GNAI1 GNAI2 GNAI3 GNAT3 GNB1 GNB2 GNB3 GNB4 GNB5 GNG10 GNG11 GNG12 GNG13 GNG2 GNG3 GNG4 GNG5 GNG7 GNG8 GNGT1 GNGT12 GNGT2 GNGT3 GNGT5 GNGT7 GNGT8 HBEGF HSP90A HSP90AA1 HSPCA IGF1R MMP2 MMP3 MMP7 MMP9 NOS3 NR3A1 NR3A2 PIK3CA PIK3R1 PIK3R2 PIK3R3 PRMT1 PTK2 S1PR3 SHC1 SPHK1 SRC STRN TGFA ZDHHC21 ZDHHC7	Bos taurus (cattle)
Cargo concentration in the ER	Alpha-1-antiproteinase Amphiregulin CD59 glycoprotein Cathepsin Z Coagulation factor V Coagulation factor VIII Dipeptidyl peptidase 1 Folate receptor 3 Glutamate receptor Golgi SNAP receptor complex member 2 LMAN2 protein Lectin, mannose binding 1 like Lectin, mannose binding 1 Multiple coagulation factor deficiency 2, ER cargo receptor complex subunit Prolactin regulatory element-binding protein Protein cornichon homolog 1 Protein cornichon homolog 2 Protein transport protein SEC23 Protein transport protein Sec24A SEC24 homolog B, COPII coat complex component SEC24 homolog C, COPII coat complex component SEC24 homolog D, COPII coat complex component SH3 domain-containing protein Small COPII coat GTPase SAR1B Syntaxin-5 Transforming growth factor alpha Transmembrane emp24 domain-containing protein 10 VIP36-like protein Vesicle-trafficking protein SEC22b	A0A3Q1LM15 A0A3Q1LUP7 A0A3Q1M762 A0A3Q1M7J4 A0A3Q1MFL2 A0A3Q1MMA1 A0A3Q1MSA1 A0A3Q1NDZ1 A6QNT8 A6QP36 E1BIU0 E1BJ99 E1BL12 E1BPR4 F1MEV4 F1MV07 F1MVW5 F1N0I3 F1N455 G0T3G6 G5E5W1 P05689 P34955 Q08DB5 Q2HJD1 Q32PA1 Q3T0T7 Q5BIN6 Q5E971	AREG CD59 CNIH CNIH1 CTSC CTSZ F5 F8 FOLR3 GOSR2 GRIA1 LMAN1 LMAN1L LMAN2 LMAN2L MCFD2 MIA2 PI PREB RAB1B SAR1B SEC22B SEC23A SEC24A SEC24B SEC24C SEC24D SERPINA1 STX5 TGFA TMED10 TMP21 VIPL	Bos taurus (cattle)
trans-Golgi Network Vesicle Budding	ADP-ribosylation factor 1 Golgi brefeldin A resistant guanine nucleotide exchange factor 1 Synaptosomal-associated protein Syntaxin 4 Vesicle-associated membrane protein 2 Vesicle-associated membrane protein 8	A0A452DIB2 E1BMC4 P63026 P84080 Q2T9M8 Q3T0Y8	ARF1 GBF1 SNAP23 STX4 SYB2 VAMP2 VAMP8	Bos taurus (cattle)
VxPx cargo-targeting to cilium	ADP-ribosylation factor 4 Cyclic nucleotide gated channel subunit alpha 4 Cyclic nucleotide gated channel subunit beta 1 Cyclic nucleotide-gated olfactory channel Exocyst complex component 1 Exocyst complex component 2 Exocyst complex component 3 Exocyst complex component 5 Exocyst complex component 7 Exocyst complex component 8 Exocyst complex component Sec8 Exocyst complex component Golgi brefeldin A resistant guanine nucleotide exchange factor 1 Polycystin-2 RAB11 family interacting protein 3 RAB3A interacting protein Ras-related protein Rab-11A Ras-related protein Rab-8A Rhodopsin	A0A3Q1LHY8 A0A3Q1MNT5 A0A3Q1NJP2 A4FV54 A4IF89 A6QLD1 E1BDW9 E1BMC4 F1MBN0 F1MC71 F1MM42 F1MTS7 F1N005 F2Z4D5 P02699 Q0V8C2 Q2KI32 Q3SZF2 Q4GZT3	ARF4 CNGA2 CNGA4 CNGB1 EXOC1 EXOC2 EXOC3 EXOC4 EXOC5 EXOC6 EXOC7 EXOC8 GBF1 PKD2 RAB11A RAB11FIP3 RAB3IP RAB8A RHO SEC6 TRPP2	Bos taurus (cattle)
Retrograde transport at the Trans-Golgi-Network	ADP-ribosylation factor-like protein 1 ADP-ribosylation factor-related protein 1 Arfaptin-2 Beta-soluble NSF attachment protein Cation-dependent mannose-6-phosphate receptor Component of oligomeric golgi complex 5 Conserved oligomeric Golgi complex subunit 1 Conserved oligomeric Golgi complex subunit 2 Conserved oligomeric Golgi complex subunit 3 Conserved oligomeric Golgi complex subunit 4 Conserved oligomeric Golgi complex subunit 6 Conserved oligomeric Golgi complex subunit 7 Conserved oligomeric Golgi complex subunit 8 GRIP and coiled-coil domain containing 1 GRIP and coiled-coil domain containing 2 Gamma-soluble NSF attachment protein Golgin A1 Golgin A4 Insulin like growth factor 2 receptor NSF attachment protein alpha Perilipin Protein RIC1 homolog Protein SYS1 homolog RAB6A, member RAS onco family RAB6B, member RAS onco family RAB9A, member RAS onco family RAB9B, member RAS onco family RGP1 homolog, RAB6A GEF complex partner 1 Rab9 effector protein with kelch motifs Rho related BTB domain containing 3 Short coiled-coil protein Short coiled-coil protein Syntaxin 10 Syntaxin 16 Syntaxin-6 TATA element modulatory factor 1 Trans-golgi network protein 2 Vacuolar protein sorting-associated protein 51 homolog Vacuolar protein sorting-associated protein 52 homolog Vacuolar protein sorting-associated protein 53 homolog Vacuolar protein sorting-associated protein 54 Vesicle transport through interaction with t-SNAREs 1A Vesicle-associated membrane protein 4 Vesicle-fusing ATPase	A0A3Q1LSE5 A0A3Q1LTE3 A0A3Q1M2K6 A0A3Q1M5V0 A0A3Q1M9K7 A0A3Q1MBS7 A0A3Q1MPM7 A0A452DHU1 A0A452DKB6 A2VE18 A7YWK8 E1BB16 E1BDC9 E1BFF9 E1BGA6 E1BIQ3 E1BJW7 E1BJZ4 E1BK29 E1BQ02 F1MIE6 F1MJ84 F1MKR0 F1MLE3 F1MND0 F1MQ89 F1MUW6 F1N5R4 F1N686 F6Q334 F6RJ01 G3N173 P11456 P81126 Q08DW1 Q0VCB4 Q1RMQ3 Q2YDM1 Q32L97 Q32LJ2 Q3MHG0 Q3SX32 Q3ZCL5 Q5EA50	ARFIP2 ARFRP1 ARL1 COG1 COG2 COG3 COG4 COG5 COG6 COG7 COG8 GCC1 GCC2 GOLGA1 GOLGA4 IGF2R M6PR M6PRBP1 NAPA NAPB NAPG NSF PLIN3 RAB6A RAB6B RAB9A RAB9B RABEPK RGP1 RHOBTB3 RIC1 SCOC SNAPB STX10 STX16 STX6 SYS1 TMF1 VAMP4 VPS51 VPS52 VPS53 VPS54 VTI1A	Bos taurus (cattle)
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)	Cingulin E3 ubiquitin-protein ligase Junctional adhesion molecule A Par-3 family cell polarity regulator Par-6 family cell polarity regulator alpha Polyubiquitin-B Polyubiquitin-C Protein kinase C Rho/Rac guanine nucleotide exchange factor 18 Serine/threonine-protein kinase receptor TGF-beta receptor type-1 Transforming growth factor beta-1 proprotein Transforming protein RhoA Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	A0A3Q1M590 A0A3Q1MSP9 A0A3Q1N449 E1B9G8 F1MLS5 F1MYN2 F6RHP0 G3MZV8 O46680 P0CG53 P0CH28 P61585 P62992 P63048 Q9XT56	ARHA ARHGEF18 CGN F11R JAM1 PARD3 PARD6A PRKCZ RHO12 RHOA RPS27A SMURF1 TGFB1 TGFBR1 TGFBR2 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2	Bos taurus (cattle)

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