GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1 - 25 of 268 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
A tetrasaccharide linker sequence is required for GAG synthesis
  • AGRN
  • B3GALT6
  • B3GAT1
  • B3GAT2
  • B3GAT3
  • B4GALT7
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • DCN1C
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GPC6
  • NCAN
  • SDC1
  • SDC3
  • SDC4
  • VCAN
  • XYLT1
  • XYLT2
Canis familiaris (dog)
ABC-family proteins mediated transport
  • ABCA4
  • ABCA8
  • ABCB1
  • ABCB4
  • ABCB5
  • ABCB9
  • ABCC1
  • ABCC10
  • ABCC11
  • ABCC2
  • ABCC3
  • ABCC4
  • ABCC5
  • ABCC6
  • ABCC7
  • ABCC9
  • ABCF1
  • Abcc4
  • CFTR
  • DERL1
  • DERL2
  • DERL3
  • EIF2S1
  • EIF2S2
  • EIF2S3
  • ERLEC1
  • ERLIN1
  • ERLIN2
  • KCNJ11
  • LOC100686569
  • LOC100687259
  • LOC610717
  • MRP1
  • OS9
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC1
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMD1
  • PSMD10
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RNF5
  • RPS27A
  • SEL1L
  • UBA52
  • UBB
  • UBC
  • UBCEP2
  • VCP
Canis familiaris (dog)
APAP ADME
  • ABCC1
  • ABCC2
  • ABCC3
  • ABCC4
  • ABCC5
  • ABCG2
  • ABHD14A
  • Abcc4
  • Abcg2
  • CNDP2
  • CYP2E1
  • GGT1
  • GGT6
  • GGT7
  • GSTP1
  • LOC119874463
  • LOC119876946
  • MRP1
  • SULT1A1
  • SULT1C4
  • SULT1E1
  • UGT1A6
Canis familiaris (dog)
Activation of Matrix Metalloproteinases
  • CMA1
  • COL18A1
  • CTRB
  • CTRB1
  • CTSG
  • CTSL
  • CTSL1
  • ELA2
  • ELANE
  • FURIN
  • KLK1
  • KLK2
  • KLKB1
  • MMP1
  • MMP11
  • MMP13
  • MMP14
  • MMP15
  • MMP16
  • MMP17
  • MMP2
  • MMP24
  • MMP25
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PLG
  • PRSS2
  • SPOCK3
  • TIMP1
  • TIMP2
Canis familiaris (dog)
Activation of the phototransduction cascade
  • CNGA1
  • CNGB1
  • GNAT1
  • GNB1
  • GNGT1
  • PDBS
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEA
  • PDEB
  • PDEG
  • RHO
Canis familiaris (dog)
Adenosine P1 receptors
  • ADORA1
  • ADORA2A
  • ADORA3
  • RDC7
  • RDC8
Canis familiaris (dog)
Adherens junctions interactions
  • AFDN
  • CADM1
  • CADM2
  • CADM3
  • CDH1
  • CDH10
  • CDH11
  • CDH12
  • CDH13
  • CDH15
  • CDH17
  • CDH18
  • CDH2
  • CDH24
  • CDH3
  • CDH4
  • CDH5
  • CDH6
  • CDH7
  • CDH8
  • CDH9
  • CTNNA1
  • CTNNB1
  • CTNND1
  • JUP
  • NECTIN1
  • NECTIN2
  • NECTIN3
  • NECTIN4
Canis familiaris (dog)
Aggrephagy
  • ABCC7
  • ARL13B
  • CETN1
  • CFTR
  • DYNC1H1
  • DYNC1I1
  • DYNC1I2
  • DYNC1LI1
  • DYNC1LI2
  • DYNLL1
  • DYNLL2
  • HDAC6
  • IFT88
  • LOC119881719
  • PARK7
  • PCNT
  • PRKN
  • RPS27A
  • UBA52
  • UBB
  • UBC
  • UBCEP2
  • UBE2N
Canis familiaris (dog)
Amine ligand-binding receptors
  • GPR143
Canis familiaris (dog)
Amino acid transport across the plasma membrane
  • SLC16A10
  • SLC1A4
  • SLC1A5
  • SLC25A29
  • SLC36A1
  • SLC36A3
  • SLC36A4
  • SLC38A1
  • SLC38A2
  • SLC38A3
  • SLC38A4
  • SLC38A5
  • SLC3A1
  • SLC3A2
  • SLC43A1
  • SLC43A2
  • SLC6A12
  • SLC6A14
  • SLC6A15
  • SLC6A18
  • SLC6A19
  • SLC6A20
  • SLC6A6
  • SLC7A1
  • SLC7A10
  • SLC7A11
  • SLC7A2
  • SLC7A5
  • SLC7A6
  • SLC7A8
  • SLC7A9
  • SNX12
Canis familiaris (dog)
Antigen Presentation: Folding, assembly and peptide loading of class I MHC
  • B2M
  • CALR
  • CANX
  • DLA-12
  • DLA-79
  • DLA-DOB
  • DLA88
  • ERAP1
  • HSPA5
  • LOC119876190
  • LOC119876868
  • PDIA3
  • SEC13
  • SEC23A
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SEC31A
  • TAPBP
Canis familiaris (dog)
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers
  • BLNK
  • BTK
  • CD19
  • CD79A
  • CD79B
  • DAPP1
  • GRB2
  • IGHM
  • ITPR1
  • ITPR2
  • ITPR3
  • MAG
  • NCK1
  • PIK3AP1
  • PIK3CD
  • PIK3R1
  • PLCG2
  • PTPN6
  • SH3KBP1
  • SOS1
  • STIM1
  • SYK
  • TRPC1
  • VAV1
Canis familiaris (dog)
Antimicrobial peptides
  • BPI
  • BPIFA1
  • BPIFA2
  • BPIFB1
  • BPIFB2
  • BPIFB4
  • BPIFB6
  • CAMP
  • CHGA
  • CTSG
  • ELA2
  • ELANE
  • GNLY
  • LEAP2
  • LOC100687463
  • PGLYRP1
  • PGLYRP2
  • PI3
  • PRSS2
  • REG3A
Canis familiaris (dog)
Apoptotic cleavage of cell adhesion proteins
  • CASP3
  • CDH1
  • CTNNB1
  • DSG1
  • DSG2
  • DSG3
  • DSP
  • OCLN
  • PKP1
  • TJP1
  • TJP2
Canis familiaris (dog)
Apoptotic cleavage of cellular proteins
  • ACIN1
  • APC
  • BCAP31
  • BIRC2
  • BMX
  • CASP3
  • CASP6
  • CASP7
  • CASP8
  • CLSPN
  • PRKCD
  • PRKCQ
  • PTK2
  • ROCK1
  • SATB1
  • STK24
  • STK26
Canis familiaris (dog)
Apoptotic execution phase
  • BCAP31
  • CASP8
  • DNM1L
  • LOC119868890
  • STK24
Canis familiaris (dog)
Arachidonic acid metabolism
  • DGAT2L6
  • FAAH
  • PLA2G4A
Canis familiaris (dog)
Asparagine N-linked glycosylation
  • ASGR1
  • ASGR2
  • B4GALNT2
  • UMOD
Canis familiaris (dog)
Assembly and cell surface presentation of NMDA receptors
  • GRIN1
  • GRIN2A
  • GRIN2B
  • GRIN2C
  • GRIN2D
  • GRIN3A
  • NMDAR1
Canis familiaris (dog)
Atorvastatin ADME
  • ABCB1
  • ABCC2
  • CYP3A12
  • LOC119868939
  • LOC119875773
  • LOC119876349
  • PON1
  • PON3
  • SLCO1B2
  • SLCO1B3
  • SLCO2B1
Canis familiaris (dog)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • ALG1
  • ALG12
  • ALG14
  • ALG2
  • ALG3
  • ALG6
  • ALG8
  • ALG9
  • DPAGT1
  • MPDU1
Canis familiaris (dog)
CD22 mediated BCR regulation
  • CD79A
  • CD79B
  • IGHM
  • LYN
  • MAG
  • PTPN6
Canis familiaris (dog)
COPII-mediated vesicle transport
  • ANKRD28
  • AREG
  • BET1
  • CD59
  • CNIH1
  • CNIH2
  • CNIH3
  • CSNK1D
  • CTSC
  • CTSZ
  • F5
  • GOLGA2
  • GORASP1
  • GOSR2
  • GRIA1
  • LMAN1
  • LMAN1L
  • LMAN2
  • LMAN2L
  • LOC119876190
  • LOC609612
  • MCFD2
  • NAPA
  • NAPB
  • NAPG
  • NSF
  • PPP6C
  • PPP6R1
  • PPP6R3
  • PREB
  • RAB1
  • RAB1A
  • SCFD1
  • SEC13
  • SEC16A
  • SEC16B
  • SEC22A
  • SEC22C
  • SEC23A
  • SEC23IP
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SEC31A
  • SERPINA1
  • STX17
  • STX5
  • TBC1D20
  • TFG
  • TGFA
  • TMED10
  • TMED2
  • TRAPPC1
  • TRAPPC10
  • TRAPPC2
  • TRAPPC2L
  • TRAPPC3
  • TRAPPC4
  • TRAPPC6A
  • TRAPPC6B
  • TRAPPC9
  • USO1
  • YKT6
Canis familiaris (dog)
COX reactions
  • COX1
  • PTGS1
Canis familiaris (dog)
CS/DS degradation
  • ARSB
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • DCN1C
  • HEXA
  • HEXB
  • HYAL1
  • IDS
  • IDUA
  • NCAN
  • VCAN
  • arsb
  • ids
Canis familiaris (dog)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024