GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **226 - 250** of **252** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Assembly of collagen fibrils and other multimeric structures	Collagen alpha-1(II) chain precursor Collagen alpha-1(XI) chain Collagen alpha-1(XXVII) chain B Collagen alpha-2(I) chain precursor Collagen alpha-3(V) chain precursor Collagen, type I, alpha 1b precursor	A0MSJ1 D6MUD3 D6MUD6 Q2LDA1 Q6IQX2 Q6PEI9	COL11A1b COL5A3a alpha2(I) alpha3(I) col11a1 col11a1b col1a1b col1a2 col1a3 col27a1 col27a1b col2a1 col2a1a col5a3 col5a3a coll2a1 fb38c06 fc10c01 fj59a10 hm:zeh0348 hm:zehn2357 si:dkey-87l9.2 wu:fa95h05 wu:fa98d05 wu:fa99g10 wu:fb04c08 wu:fb11d06 wu:fb38c06 wu:fb54e07 wu:fc10c01 wu:fd02a10 wu:fj59a10 zehn2357	Danio rerio (zebrafish)
Asparagine N-linked glycosylation	Asialoglycoprotein receptor 1 Si Si	A4IG84 B3DFJ9 F8W3Q0	asgr1a cldc1 si:ch211-125e6.12 si:ch211-125e6.13 si:ch211-154o6.6 si:ch73-361h17.1 si:ch73-86n18.1	Danio rerio (zebrafish)
Arachidonic acid metabolism	Cytosolic phospholipase A2 Diacylglycerol O-acyltransferase 2 Fatty-acid amide hydrolase 2-A	P50392 Q4V9F0 Q6DH69	cpla2 dgat2 faah2a pla2g4 pla2g4a	Danio rerio (zebrafish)
Arachidonate production from DAG	Lysophosphatidylserine lipase ABHD12 Monoglyceride lipase sn-1-specific diacylglycerol lipase	E7F0B3 Q08C93 Q7ZWC2	MGLL abhd12 cb909 dagla mgll wu:fc66g01 zgc:56561	Danio rerio (zebrafish)
Apoptotic execution phase	Caspase 10, apoptosis-related cysteine peptidase Dynamin-1-like protein Endoplasmic reticulum transmembrane protein non-specific serine/threonine protein kinase	A3KP89 E7EXV8 Q7SXN5 Q7ZUJ4	bcap31 casp10 casp8l2 dnm1l si:bz30i22.4 si:rp71-30i22.4 stk24a zgc:163071 zgc:56389	Danio rerio (zebrafish)
Apoptotic cleavage of cellular proteins	Baculoviral IAP repeat-containing 2 Caspase 10, apoptosis-related cysteine peptidase Caspase 7, apoptosis-related cysteine peptidase Caspase-3 Caspase-6 Endoplasmic reticulum transmembrane protein Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Protein kinase C delta type SATB homeobox 1a non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A1L1V1 A3KP89 B1WB98 E7EXV8 Q1LUN2 Q503H4 Q52KK6 Q7T0K2 Q7ZUC5 Q7ZUJ4 Q98UI8	IAP1 bcap31 birc2 birc3 casp10 casp3 casp3a casp6 casp6a casp7 casp8l2 fb09d10 fnta fv43b11 im:6909421 mst4 prkcd prkcda satb1a sb:cb955 si:bz30i22.4 si:ch211-195k18.2 si:rp71-30i22.4 stk24a stk26 wu:fb09d10 wu:fb51d12 wu:fv43b11 wu:fz92f09 zgc:100890 zgc:110595 zgc:112960 zgc:158397 zgc:163071 zgc:175288 zgc:56389 zgc:56558	Danio rerio (zebrafish)
Apoptotic cleavage of cell adhesion proteins	Cadherin-1 Caspase-3 Catenin beta-1 Desmoglein-2.1 Desmoplakin-A Occludin	A0A8M2BID5 F1QGH7 F1R799 H2EQR6 Q90Z37 Q98UI8	E-cad casp3 casp3a cdh1 ctnnb1 dsg2 dsg2.1 dsga dspa ocln oclna wu:fd23h10 wu:fi13c01 zgc:100890 zgc:113992 zgc:56359	Danio rerio (zebrafish)
Antimicrobial peptides	Intelectin 1 precursor Intelectin 2 Intelectin 3 Liver-expressed antimicrobial peptide 2 NK lysin-like protein Peptidoglycan recognition protein 1 Peptidoglycan recognition protein 2 RNase 2 RNase 3 Ribonuclease-like 3 Uncharacterized protein LOC767641 isoform X1 lysozyme	A5HAK0 A5HAK1 A5HAK2 B3DGL6 C1IHU9 C1IHV0 F1QYP1 Q08CC6 Q1W1Y2 Q1W1Y3 Q7T3Q1 Q90YS5	INTL1 INTL2 INTL3 LOC793075 PGRP-SC1a im:7150573 intl2 intl3 itln1 itln2 itln3 leap2 lys-C lyz nkl.4 nkld pglyrp2 pglyrp5 pgrp-l rnasel2 rnasel3 rnasel4 si:ch211-139g14.6 si:ch211-194p6.4 si:ch211-202c21.3 si:dkey-113g17.4 si:rp71-40n14.1 wu:fj22b05 zgc:136734 zgc:153267 zgc:194626 zgc:194647	Danio rerio (zebrafish)	G49108TO
Antagonism of Activin by Follistatin	Follistatin-A Follistatin-like 3 (secreted glycoprotein) Inhibin beta A chain Inhibin beta B chain	A1L1T8 A4IG14 B0S7E0 Q9YHV4	actbb actbetaB fst fst1 fsta fstl3 inhbab inhbal inhbb si:dkey-28h18.3 zgc:114170 zgc:158348	Danio rerio (zebrafish)
Amino acids regulate mTORC1	GTP-binding protein Rheb H(+)-transporting two-sector ATPase Neutral amino acid transporter 9 Ragulator complex protein LAMTOR2 Ragulator complex protein LAMTOR3 Ragulator complex protein LAMTOR4 Ragulator complex protein LAMTOR5 Ras-related GTP-binding protein Ras-related GTP-binding protein Regulatory-associated protein of MTOR, complex 1 SH3 domain-binding protein 4-A Serine/threonine-protein kinase TOR Target of rapamycin complex subunit lst8 V-type proton ATPase proteolipid subunit V-type proton ATPase subunit C 1-A V-type proton ATPase subunit D V-type proton ATPase subunit E 1 V-type proton ATPase subunit F V-type proton ATPase subunit G V-type proton ATPase subunit H V-type proton ATPase subunit a V-type proton ATPase subunit d 1 V-type proton ATPase subunit Vacuolar proton pump subunit B	A0A0R4IFI0 B0R0V8 E7FA90 E7FCD8 Q06RG6 Q08BA4 Q0P3X8 Q1LVQ2 Q502N9 Q503S6 Q504A1 Q6DEG4 Q6DRK0 Q6P041 Q6PBR5 Q6PC18 Q6PGV1 Q7T385 Q7ZUI2 Q7ZVM7 Q7ZVX8 Q803V5 Q8JHH4 Q8QHA7	RRAGB atp6e atp6v0cb atp6v0d1 atp6v1ab atp6v1ba atp6v1c1 atp6v1c1a atp6v1d atp6v1e1 atp6v1e1b atp6v1f atp6v1g1 atp6v1h atpv0e2 cb927 chunp6890 chunp6932 cto fb52g11 fj35f08 frap1 gbl lamtor2 lamtor3 lamtor4 lamtor5 lst8 mapksp1 mlst8 mtor rheb rptor rraga rragc rragca sh3bp4 sh3bp4a si:dkey-176g4.2 slc38a9 tcirg1 tcirg1b tor vatB1 wu:fa12a02 wu:fb44e06 wu:fb52g11 wu:fc22h08 wu:fc68h09 wu:fc74d11 wu:fi46h07 wu:fj35f08 wu:fq38h02 zgc:109987 zgc:111904 zgc:111971 zgc:55524 zgc:56499 zgc:73144 zgc:73282 zgc:77708 zgc:92923	Danio rerio (zebrafish)
Amino acid transport across the plasma membrane	Amino acid transporter Amino acid transporter Cationic amino acid transporter 2 High affinity cationic amino acid transporter 1 isoform X1 Large neutral amino acids transporter small subunit 3 Mitochondrial carnitine/acylcarnitine carrier protein CACL Monocarboxylate transporter 10 Proton-coupled amino acid transporter 4 Slc38a3 protein Sodium-coupled neutral amino acid symporter 2 Solute carrier family 3 (Amino acid transporter heavy chain), member 2b isoform X1 Solute carrier family 7 (Cationic amino acid transporter, y+ system), member 7 Transporter Transporter Transporter Transporter Transporter Transporter Uncharacterized protein LOC790938 Y+L amino acid transporter 2	A0A2R8QFJ7 A1A5Y9 A1L1W9 A2RUY1 A5D8R6 A8WG91 D7RVS1 D7RVS2 E7F8C6 Q1LVJ1 Q1LVQ4 Q2VRP7 Q2YDQ4 Q4V8X8 Q59I64 Q5PR34 Q5SPB1 Q6DG25 Q6P3H9 Q6PBA3	fa11f11 fc26e12 fc51c07 id:ibd1327 sb:cb519 si:ch211-132b12.1 si:ch211-154h20.4 si:zc101n13.5 slc16a10 slc1a4 slc1a5 slc25a29 slc36a4 slc38a2 slc38a3 slc38a5b slc3a2b slc43a1b slc6a11 slc6a11a slc6a15 slc6a18 slc6a19 slc6a19b slc6a6 slc6a6b slc7a1 slc7a1a slc7a2 slc7a6 slc7a7 snat2 tau taut wu:fa01a01 wu:fa11f11 wu:fc26e12 wu:fc31c02 wu:fc48a10 wu:fc51c07 wu:fd58f10 wu:fe14a07 wu:fq18d12 zgc:114094 zgc:123300 zgc:158383 zgc:158423 zgc:172267 zgc:55813 zgc:66050 zgc:92015 zgc:92817	Danio rerio (zebrafish)
Amine ligand-binding receptors	Si Trace amine associated receptor 69 Trace amine-associated receptor 10a Trace amine-associated receptor 12e Trace amine-associated receptor 12g Trace amine-associated receptor 13c Trace amine-associated receptor 13e Trace amine-associated receptor 14e Trace amine-associated receptor 14f Trace amine-associated receptor 15	B3DIB2 Q5QNN9 Q5QNP0 Q5QNP2 Q5QNP3 Q5QNP6 Q5QNP8 Q5QNQ3 Q5RG93 Q5RG95	si:ch211-119b12.1 si:ch211-119b12.3 si:dkey-7c18.1 si:dkey-7c18.17 si:dkey-7c18.19 si:dkey-7c18.20 si:dkey-7c18.21 si:dkey-7c18.7 si:dkey-7c18.9 ta66 taar10a taar12b taar12e taar12f taar12g taar13c taar13e taar14e taar14f taar15 taar66 taar69 taar72 zgc:194718	Danio rerio (zebrafish)
Aggrephagy	ADP-ribosylation factor-like protein 13B Cystic fibrosis transmembrane conductance regulator Dynein light chain Dynein light intermediate chain Dynein, cytoplasmic 1, intermediate chain 2a E2 ubiquitin-conjugating enzyme E3 ubiquitin-protein ligase parkin Histone deacetylase 6 Parkinson disease protein 7 homolog Ubiquitin-conjugating enzyme E2 variant 1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	E7F6H7 F8W4B7 Q1LUM9 Q1LX78 Q3B7F0 Q3B7P7 Q561U2 Q5BL99 Q5XJ36 Q7SXA3 Q803J2 Q8JHI3	arl13b arl2l1 cb741 cftr dj1 dlc-1 dncli2 dnl2 dnl2l dync1i2a dync1li1 dynll2a dynll2b fc73a07 hdac6 hm:zeh0386 ik:tdsubc_1f2 im:7136154 park2 park7 prkn rps27a si:ch211-123f21.1 si:dkey-63j1.8 tdsubc_1f2 uba52 ube2n ube2na ube2v1 wu:fa91f08 wu:fb11b03 wu:fc08b06 wu:fc73a07 xx:tdsubc_1f2 zgc:110812 zgc:112390 zgc:123326 zgc:123344 zgc:55726 zgc:66081 zgc:66168	Danio rerio (zebrafish)
Adrenoceptors	Alpha-1B-adrenergic receptor Alpha-2A adrenergic receptor Alpha-2B adrenergic receptor Alpha-2C adrenergic receptor Beta-1 adrenergic receptor Beta-2 adrenergic receptor	A4QNV7 B3DHM6 Q5U3D9 Q90WY4 Q90WY5 Q90WY6	adra1bb adra2a adra2b adra2c adrb1 adrb2b zgc:103685 zgc:162188 zgc:194728 zgc:194731	Danio rerio (zebrafish)
Adrenaline,noradrenaline inhibits insulin secretion	Alpha-2A adrenergic receptor Alpha-2C adrenergic receptor Guanine nucleotide binding protein (G protein), beta polypeptide 3, like Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(i) subunit alpha-1 Guanine nucleotide-binding protein G(i) subunit alpha-2 Guanine nucleotide-binding protein subunit beta-5a Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma adenylate cyclase	A0A0R4IHM6 A1L271 D2CFN3 Q503Q6 Q6DGZ5 Q6DH00 Q6DH55 Q6PBN9 Q6PBR4 Q6TH03 Q7T3D3 Q7ZWI5 Q803H5 Q90WY4 Q90WY6 Q90Z40	GNB1x GNG5 [g]3 adcy5 adra2a adra2c fb39f01 fi21e06 gnai1 gnai2 gnai2b gnb1b gnb1l gnb3a gnb3l gnb5a gng1 gng12b gng13b gng3 gng5 gng7 gng8 gngt1 gngt2 gngt2a id:ibd1139 ik:tdsubc_2c12 si:dkey-178j17.2 si:dkey-44g17.6 si:dkeyp-60a7.2 wu:fb39f01 wu:fb98e06 wu:fi21e06 wu:fj09d12 wu:fj56b02 wu:fk53d05 wu:fk53d06 xx:tdsubc_2c12 zgc:100880 zgc:110316 zgc:55774 zgc:56690 zgc:63957 zgc:73318 zgc:92641 zgc:92704 zgc:92709 zgc:92852	Danio rerio (zebrafish)
Adrenaline signalling through Alpha-2 adrenergic receptor	Alpha-2A adrenergic receptor Alpha-2B adrenergic receptor Alpha-2C adrenergic receptor	Q90WY4 Q90WY5 Q90WY6	adra2a adra2b adra2c	Danio rerio (zebrafish)
Adherens junctions interactions	Cadherin 11, osteoblast Cadherin 6 Cadherin-17 Cadherin-1 Cadherin-2 Cadherin-4 Cadherin-5 Cadherin-6 Cell adhesion molecule 1b isoform 1 Nectin 1b Nectin-3-like protein RNase 2 RNase 3 Ribonuclease-like 3	A1L1M6 A5HAK0 A5HAK1 A5HAK2 B0F6R1 B0JYH6 B3DGG4 Q2MLR9 Q58EG3 Q5WN09 Q68SP4 Q90275 Q90X63 Q90Z37	E-cad R-cadherin cadm1b cb903 cdh1 cdh10 cdh10a cdh11 cdh17 cdh2 cdh4 cdh5 cdh6 cdhvn fb65d02 nectin1b nectin3 pac pvrl1b pvrl3l rcad rnasel2 rnasel3 rnasel4 sc:d0664 si:ch211-139g14.6 vnc wu:fb65d02 zgc:103673 zgc:136316	Danio rerio (zebrafish)
Acyl chain remodelling of PS	Cytosolic phospholipase A2 Group XIIA secretory phospholipase A2 precursor Phospholipase A1 member A Phospholipase A2 Retinoic acid receptor responder 3-like	A3KNJ5 P50392 Q6DHK9 Q6DHQ7 Q6NYZ4	cpla2 pla1a pla2g10 pla2g12a pla2g4 pla2g4a rarres3l zgc:162119	Danio rerio (zebrafish)
Acyl chain remodelling of PI	Cytosolic phospholipase A2 gamma-like Cytosolic phospholipase A2 Group XIIA secretory phospholipase A2 precursor Lysophospholipid acyltransferase 7 Phospholipase A2 Phospholipase B-like Retinoic acid receptor responder 3-like	A3KNJ5 B3DJ80 P50392 Q5U3S0 Q6DHK9 Q6DHQ7 Q7SZQ0	cpla2 im:7138859 leng4 mboat7 oact7 pla2g10 pla2g12a pla2g4 pla2g4a plbd1 plbd1a rarres3l zgc:101699 zgc:162119	Danio rerio (zebrafish)
Acyl chain remodelling of PG	Acyl-CoA Cytosolic phospholipase A2 Group XIIA secretory phospholipase A2 precursor Lysophosphatidylcholine acyltransferase 1 Phospholipase A2 cardiolipin synthase (CMP-forming) phospholipase A2	A3KNJ5 P50392 Q1LWG4 Q32PR6 Q4KMD5 Q6DHQ7 Q6NW82	aytl2 cpla2 crls1 fc21c12 fj66b10 lpcat1 lpgat1 pla2g10 pla2g12a pla2g3 pla2g4 pla2g4a si:dkey-30h14.2 wu:fc21c12 wu:fj66b10 zgc:112278 zgc:162119 zgc:85909	Danio rerio (zebrafish)
Acyl chain remodelling of PC	Cytosolic phospholipase A2 gamma-like Cytosolic phospholipase A2 Group XIIA secretory phospholipase A2 precursor Lysophosphatidylcholine acyltransferase 1 Lysophosphatidylcholine acyltransferase 2 Phospholipase A2 Phospholipase B-like Retinoic acid receptor responder 3-like lysoplasmalogenase lysoplasmalogenase phospholipase A2	A3KNJ5 B3DJ80 P50392 Q0P4C9 Q1LWG4 Q32PR6 Q502J0 Q5BLD1 Q5U3S0 Q6DHK9 Q6DHQ7	aytl1 aytl2 cpla2 im:7137034 im:7138859 lpcat1 lpcat2 pla2g10 pla2g12a pla2g3 pla2g4 pla2g4a plbd1 plbd1a rarres3l tmem86a tmem86b zgc:101699 zgc:113571 zgc:153124 zgc:162119	Danio rerio (zebrafish)
Activation of the phototransduction cascade	Guanine nucleotide-binding protein (G protein), alpha transducing activity polypeptide 1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein subunit gamma Rhodopsin	P35359 Q6PBN9 Q803H5 Q90WX6	GNB1x fb39f01 fk56e06 gnat1 gnb1b gnb1l gng1 gngt1 rho wu:fb39f01 wu:fb98e06 wu:fj09d12 wu:fk53d06 wu:fk56e06 zfo2 zgc:55774 zgc:73318	Danio rerio (zebrafish)
Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3	Androgen receptor Histone H2A.V Histone H2A Histone H2A Histone H2A Histone H2B 1/2 Histone H2B 3 Histone H2B Histone H2B Histone H2B Histone H3.2 Histone H3.3 Histone H4 Nuclear receptor coactivator 2 Uncharacterized protein LOC100126107 [histone H3]-trimethyl-L-lysine(9) demethylase protein kinase C	A2RRT0 A3KPR4 A4GT83 A4QNX9 A7E2M8 A7MCA8 B3DJF8 Q0Z946 Q4QRF4 Q5BJA5 Q5XJK2 Q6PC60 Q6PI20 Q71PD7 Q7ZTT0 Q98TW1 R4GE15	LOC100150038 LOC100329358 LOC100331412 LOC100332229 LOC103908680 LOC108181627 LOC562770 LOC570661 LOC794549 NR3C4 ar grip1 h2af1al h2afvb h2afvl h2afx1 h2afza h2av h2ax1 h2az2a h2az2b h3-5 h3f3a h3f3b.1 h3f3c h3f3d hist2h2l im:6896397 jmjd2c kdm4c ncoa2 pkn1b si:ch211-113a14.17 si:ch211-113a14.29 si:ch211-113a14.6 si:ch73-36p18.4 si:dkey-108k21.12 si:dkey-108k21.18 si:dkey-108k21.28 si:dkey-23a13.7 src2 tif2 wu:fd55d07 zgc:112234 zgc:113984 zgc:173585 zgc:173587 zgc:194998 zgc:56685	Danio rerio (zebrafish)
Acetylcholine Neurotransmitter Release Cycle	Choline O-acetyltransferase Probable vesicular acetylcholine transporter-A Ras-related protein Rab-3 Synaptotagmin Vesicle-associated membrane protein 2	B2ZGJ1 Q08C75 Q5RGB5 Q5TZ27 Q7SZZ5	chat rab3a rab3ab si:ch211-255d18.4 slc18a3a syt1 syt1a vamp2 wu:fj41c01 wu:fj61c06 wu:fk56d05 zgc:112516 zgc:73302 zgc:92899	Danio rerio (zebrafish)
ARMS-mediated activation	Adapter molecule crk Kinase D-interacting substrate of 220 kDa B Nerve growth factor small monomeric GTPase	Q6DEM2 Q6IQP4 Q6YBR5 Q7T163	arms crk fb34h10 fc05a01 fi19g05 kidins220 kidins220b ngf ngfb rap1a rap1aa wu:fb34h10 wu:fc05a01 wu:fc54a04 wu:fc66g06 wu:fi19g05 zgc:100936 zgc:86676	Danio rerio (zebrafish)

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