GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **51 - 75** of **252** in total

« First

‹ Prev

1

2

3

4

5

6

7

…

Next ›

Last »
Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol	Organism	GlyTouCan ID
Pentose phosphate pathway	6-phosphogluconate dehydrogenase, decarboxylating Phosphoglucomutase-2 Ribokinase Ribulose-phosphate 3-epimerase Transaldolase deoxyribose-phosphate aldolase ribose-5-phosphate isomerase	F1Q883 Q5U3H4 Q5XJS7 Q6IQD5 Q6NYE3 Q6P6Y0 Q6PBW9	RBKS Tal dera fi03d03 ik:tdsubc_2c8 pgd pgm2 rbks rpe rpia taldo1 wu:fa07h08 wu:fb93d11 wu:fc20b11 wu:fc32g02 wu:fi03d03 xx:tdsubc_2c8 zgc:101610 zgc:103524 zgc:111848 zgc:55585 zgc:66054 zgc:77113 zgc:86813	Danio rerio (zebrafish)	G31080DL
Sema4D induced cell migration and growth-cone collapse	PDZ-RhoGEF Plexin b1b Ras-like protein Rnd1a Receptor protein-tyrosine kinase Rho-associated protein kinase Rho-related GTP-binding protein RhoA-C	F1Q7U0 Q49U75 Q52WX7 Q5EBY4 Q7T2E8 Q90Y37	arhgef11 erbb2 plxnb1b rhoac rnd1a rnd1b rnd1l rock2 rock2a rok2 wu:fk50c04 wu:fv70f10 zgc:153089 zgc:63601	Danio rerio (zebrafish)
Galactose catabolism	Phosphoglucomutase-1 UDP-glucose 4-epimerase galactokinase	F1Q5H4 Q5XJU9 Q7SXW7	gale galk1 im:7147391 pgm1 wu:fb05f01 zgc:101541 zgc:136578 zgc:63718	Danio rerio (zebrafish)	G93924TT
Nicotinamide salvaging	ATP-dependent (S)-NAD(P)H-hydrate dehydratase Cytochrome P450, family 8, subfamily B, polypeptide 1 NAD(P)H-hydrate epimerase NAD-capped RNA hydrolase NUDT12 Nicotinamide N-methyltransferase Nicotinate phosphoribosyltransferase Poly [ADP-ribose] polymerase Poly [ADP-ribose] polymerase Poly [ADP-ribose] polymerase Prostacyclin synthase Prostaglandin G/H synthase 2 Renalase Sodium-coupled monocarboxylate transporter 1	F1Q575 F1QUL7 F1R1Q8 F1RE08 Q08CN1 Q3ZMH1 Q567I5 Q5RI06 Q6AZW0 Q6DHI7 Q6DHK1 Q6NX05 Q6P3H4	aibp apoa1bp cyp8b1.1 naprt naprt1 naxd naxe nudt12 parp16 parp6b parp8 ptgis ptgisl ptgs2b rnls si:ch73-198j8.4 si:dkey-3h3.2 si:dkey-97o5.6 slc5a8 slc5a8l smcte zgc:64002 zgc:77744 zgc:92286 zgc:92406	Danio rerio (zebrafish)
Synaptic adhesion-like molecules	AMPA receptor subunit GluR1A Discs large homolog 1-like protein Disks large homolog 4 Flotillin-2a Flotillin Glutamate receptor Glutamate receptor Leucine-rich repeat and fibronectin type III domain-containing 2b Leucine-rich repeat and fibronectin type III domain-containing protein 1 Leucine-rich repeat and fibronectin type-III domain-containing protein 3	E7FB24 E7FE43 Q5PYH5 Q6PGX3 Q6R005 Q71E59 Q71E60 Q71E65 Q7ZZ76 Q98TZ8	AMPA GRIN3A SI:zC231H1.1 ZfGluR1a dlg1l dlg4 flot1 flot1a flot2a glur1a glur3b glur4a gria1.1 gria1a gria3 gria3.2 gria3b gria4 gria4a iGluR4 lrfn1 lrfn2b reggie2 si:bz1o18.1 si:cabz01090165.1 si:dz44o19.1 si:zc140k5.3 wu:fj45g11 zfGRIA1[a] zfGRIA3[b] zmp:0000001073	Danio rerio (zebrafish)
Sema4D mediated inhibition of cell attachment and migration	Hepatocyte growth factor receptor Plexin b1b RAS-related Ras-like protein Rnd1a Rho GTPase-activating protein 35 Rho-related GTP-binding protein RhoA-C	E7F8G5 F1Q7U0 F1QLR7 Q4V9D8 Q52WX7 Q7T2E8	LOC100004299 arhgap35a c-met cmet fb23a02 met plxnb1b rhoac rnd1a rnd1b rnd1l rras wu:fb23a02 wu:fj98h09 wu:fk50c04 zgc:153089 zgc:92588	Danio rerio (zebrafish)
Glycerophospholipid biosynthesis	Acylglycerol kinase, mitochondrial Copine VII	E7F725 Q7ZW00	agk cpne7 mulk	Danio rerio (zebrafish)
Aggrephagy	ADP-ribosylation factor-like protein 13B Cystic fibrosis transmembrane conductance regulator Dynein light chain Dynein light intermediate chain Dynein, cytoplasmic 1, intermediate chain 2a E2 ubiquitin-conjugating enzyme E3 ubiquitin-protein ligase parkin Histone deacetylase 6 Parkinson disease protein 7 homolog Ubiquitin-conjugating enzyme E2 variant 1 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	E7F6H7 F8W4B7 Q1LUM9 Q1LX78 Q3B7F0 Q3B7P7 Q561U2 Q5BL99 Q5XJ36 Q7SXA3 Q803J2 Q8JHI3	arl13b arl2l1 cb741 cftr dj1 dlc-1 dncli2 dnl2 dnl2l dync1i2a dync1li1 dynll2a dynll2b fc73a07 hdac6 hm:zeh0386 ik:tdsubc_1f2 im:7136154 park2 park7 prkn rps27a si:ch211-123f21.1 si:dkey-63j1.8 tdsubc_1f2 uba52 ube2n ube2na ube2v1 wu:fa91f08 wu:fb11b03 wu:fc08b06 wu:fc73a07 xx:tdsubc_1f2 zgc:110812 zgc:112390 zgc:123326 zgc:123344 zgc:55726 zgc:66081 zgc:66168	Danio rerio (zebrafish)
Arachidonate production from DAG	Lysophosphatidylserine lipase ABHD12 Monoglyceride lipase sn-1-specific diacylglycerol lipase	E7F0B3 Q08C93 Q7ZWC2	MGLL abhd12 cb909 dagla mgll wu:fc66g01 zgc:56561	Danio rerio (zebrafish)
Synthesis of glycosylphosphatidylinositol (GPI)	GPI ethanolamine phosphate transferase 1 GPI mannosyltransferase 3	E7EXW2 Q7SXZ1	pigb pign zgc:172324	Danio rerio (zebrafish)
G beta:gamma signalling through PI3Kgamma	3-phosphoinositide-dependent protein kinase 1 Rho-related GTP-binding protein RhoA-C non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	E7EXT6 Q6NZV1 Q7T2E8 Q8UUX0	akt2 akt3b cb945 pdpk1b rhoac zgc:77318	Danio rerio (zebrafish)
Negative regulation of the PI3K/AKT network	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN Tribbles homolog 3 non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	E7EXT6 Q6NY44 Q7ZZ56 Q8UUX0	akt2 akt3b cb945 fa11a08 fb73f10 fc83f12 fd16b10 fk90e11 pten ptenb si:bz1g13.4 trib3 wu:fa11a08 wu:fb73f10 wu:fc83f12 wu:fd16b10 wu:fk90e11 zgc:76966	Danio rerio (zebrafish)
NFG and proNGF binds to p75NTR	Nerve growth factor receptor b Nerve growth factor	E2DGP8 Q6YBR5	ngf ngfb ngfrb ngfrl	Danio rerio (zebrafish)
Axonal growth stimulation	Nerve growth factor receptor b Nerve growth factor Rho GDP-dissociation inhibitor 1 Rho-related GTP-binding protein RhoA-C	E2DGP8 Q6YBR5 Q7T2E8 Q802W6	arhgdia ngf ngfb ngfrb ngfrl rhoac wu:fa96g11 zgc:55554 zgc:77681	Danio rerio (zebrafish)
p75NTR recruits signalling complexes	Myeloid differentiation primary response protein MyD88 Nerve growth factor receptor b Nerve growth factor Protein kinase C iota type Receptor-interacting serine/threonine-protein kinase 2 Sequestosome-1 TNF receptor-associated factor 6 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	E2DGP8 F1Q5Z8 Q3B7P7 Q4V958 Q5XJ85 Q6IWL4 Q6YBR5 Q7SXA3 Q90XF2	RICK hal hm:zeh0386 ik:tdsubc_1f2 myd88 ngf ngfb ngfrb ngfrl p62 prkci ripk2 rps27a sb:cb621 sqstm1 tdsubc_1f2 traf6 uba52 wu:fa91f08 xx:tdsubc_1f2 zgc:123344 zgc:66168 zgc:85784	Danio rerio (zebrafish)
Hyaluronan biosynthesis and export	ATP-binding cassette sub-family C member 5	E1B2R7	abcc5 fj51h02 si:ch1073-183g13.2 wu:fj51h02	Danio rerio (zebrafish)	G35674CY
EGR2 and SOX10-mediated initiation of Schwann cell myelination	Adhesion G-protein coupled receptor G6	C6KFA3	adgrg6 gpr126	Danio rerio (zebrafish)
Lactose synthesis	Beta-1,4-galactosyltransferase Facilitated glucose transporter 1 lysozyme	C1KH59 Q285P3 Q90YS5	b4galt1l fc29a02 glut1 glut1a glut1b lys-C lyz slc2a1 slc2a1a wu:fc29a02 zgc:136734 zgc:154116	Danio rerio (zebrafish)	G58161NS G74621DY
Interleukin-38 signaling	Interleukin-1 beta Interleukin-1 receptor accessory protein-like 1-B Mitogen-activated protein kinase 8	B6ZK77 K9K4N1 Q9DGD9	il-1FMA il1fma il1rapl1b jnk1 mapk8 zmp:0000001271	Danio rerio (zebrafish)
Disassembly of the destruction complex and recruitment of AXIN to the membrane	Axin-1 Caveolin Dishevelled, dsh homolog 2 (Drosophila) Frizzled 8a protein Frizzled 8b protein Frizzled class receptor 5 Frizzled homolog 2 Frizzled-1 Low density lipoprotein receptor-related protein 5 Low-density lipoprotein receptor-related protein Protein Wnt-1 Protein Wnt-8a Protein Wnt-8b Protein Wnt	B3DIG4 B3DJ49 B5L5I6 F1QTJ4 P24257 P51028 P51029 P57094 Q6IYD9 Q6YLH9 Q803Q5 Q90YL7 Q9PWK6 Q9YI00	CAV1 LRP6 ZG06 Zfz8b Zwnt[a] axin axin1 cav1 cb383 dvl2 fz10 fz2 fz3 fz5 fz6 fz8 fz8a fz8b fz8c fzA fzc fzd1 fzd2 fzd5 fzd8a fzd8b fzd8c ik:tdsubc_1e1 int-1 lrp5 lrp6 sb:eu471 wnt-1 wnt-8 wnt-8b wnt1 wnt3 wnt3 l wnt3a wnt3l wnt8 wnt8a wnt8b wnt[a] wu:fb70g09 wu:fc05d12 wu:fc07c04 wu:fd02c05 wu:fo71e09 wu:fp54a02 xx:tdsubc_1e1 zfz2 zfzA zg02 zg03 zg05 zg08 zg10 zgc:194774 zgc:55372	Danio rerio (zebrafish)
Amine ligand-binding receptors	Si Trace amine associated receptor 69 Trace amine-associated receptor 10a Trace amine-associated receptor 12e Trace amine-associated receptor 12g Trace amine-associated receptor 13c Trace amine-associated receptor 13e Trace amine-associated receptor 14e Trace amine-associated receptor 14f Trace amine-associated receptor 15	B3DIB2 Q5QNN9 Q5QNP0 Q5QNP2 Q5QNP3 Q5QNP6 Q5QNP8 Q5QNQ3 Q5RG93 Q5RG95	si:ch211-119b12.1 si:ch211-119b12.3 si:dkey-7c18.1 si:dkey-7c18.17 si:dkey-7c18.19 si:dkey-7c18.20 si:dkey-7c18.21 si:dkey-7c18.7 si:dkey-7c18.9 ta66 taar10a taar12b taar12e taar12f taar12g taar13c taar13e taar14e taar14f taar15 taar66 taar69 taar72 zgc:194718	Danio rerio (zebrafish)
FGFR2b ligand binding and activation	Fibroblast growth factor 3 Fibroblast growth factor receptor 2 Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Putative fibroblast growth factor 1	B3DHR9 P48802 Q1XG76 Q6PBT8 Q8AY90 Q8JG38	fgf-1 fgf-10 fgf-3 fgf1 fgf10 fgf10a fgf22 fgf3 fgf7 fgfr2 si:dkey-21e2.2 si:dkeyp-74c5.3 wu:fd11d03 zgc:109774	Danio rerio (zebrafish)
FGFR3c ligand binding and activation	FGF18a Fgf23 Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 8 Fibroblast growth factor receptor 3 Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Putative fibroblast growth factor 1	B3DGE3 O57341 Q2HXK8 Q38PL0 Q5MK87 Q5TKR8 Q5TLE2 Q6PBT8 Q6SJP8 Q9DFC9 Q9I8X3	dob fc89b01 fgf-1 fgf-8 fgf1 fgf16 fgf17 fgf17b fgf18 fgf18a fgf2 fgf20a fgf23 fgf4 fgf5 fgf8 fgf8a fgfr3 id:ibd5158 wu:fb05c08 wu:fc89b01	Danio rerio (zebrafish)
Phospholipase C-mediated cascade; FGFR3	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma FGF18a Fgf23 Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 8 Fibroblast growth factor receptor 3 Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Putative fibroblast growth factor 1	B3DGE3 O57341 Q2HXK8 Q38PL0 Q5MK87 Q5TKR8 Q5TLE2 Q6PBT8 Q6SJP8 Q804J6 Q9DFC9 Q9I8X3	dob fc89b01 fgf-1 fgf-8 fgf1 fgf16 fgf17 fgf17b fgf18 fgf18a fgf2 fgf20a fgf23 fgf4 fgf5 fgf8 fgf8a fgfr3 fj46f04 id:ibd5158 plcg1 wu:fb05c08 wu:fc89b01 wu:fj46f04 wu:fj57a05	Danio rerio (zebrafish)
FGFR4 ligand binding and activation	FGF18a Fgf23 Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 8 Fibroblast growth factor receptor 4 Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Putative fibroblast growth factor 1	B3DGE3 O57341 Q2HXK8 Q38PL0 Q5MK87 Q5TKR8 Q5TLE1 Q6PBT8 Q6SJP8 Q90413 Q9DFC9	dob fc89b01 fgf-1 fgf-8 fgf1 fgf16 fgf17 fgf17b fgf18 fgf18a fgf2 fgf20a fgf23 fgf4 fgf6b fgf8 fgf8a fgfr4 id:ibd5158 wu:fb05c08 wu:fc89b01 zgc:194535	Danio rerio (zebrafish)

Download data in CSV format Download data in TSV format Download data in JSON format

Table Filtering

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

All Resources

Other Information

Tools

Search Tools

International Collaboration

Acknowledgements