GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 151 - 175 of 252 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▲ Organism GlyTouCan ID
Signaling by ALK
  • alk
  • alkal1
  • alkal2b
  • cb518
  • fb79b05
  • fj33b02
  • fj46f04
  • fj48a12
  • mdk
  • mdk2
  • mdkb
  • pik3ca
  • pik3cb
  • pik3r1
  • pik3r2
  • plcg1
  • plei2
  • ptn
  • wu:fb65b05
  • wu:fb79b05
  • wu:fj33b02
  • wu:fj46f04
  • wu:fj48a12
  • wu:fj57a05
  • zHBNF
  • zgc:111787
Danio rerio (zebrafish)
MDK and PTN in ALK signaling
  • alk
  • cb518
  • fb79b05
  • fj33b02
  • fj48a12
  • mdk
  • mdk2
  • mdkb
  • plei2
  • ptn
  • wu:fb79b05
  • wu:fj33b02
  • wu:fj48a12
  • zHBNF
  • zgc:111787
Danio rerio (zebrafish)
Signaling by LTK
  • alkal1
  • alkal2b
  • ltk
  • pik3ca
  • pik3cb
  • pik3r1
  • pik3r2
  • wu:fb65b05
Danio rerio (zebrafish)
Digestion
  • alp3
  • alpi
  • alpi.1
  • alpi.2
  • fb68b10
  • im:7149588
  • si:ch211-262h13.1
  • si:ch211-262h13.2
  • wu:fa95f04
  • wu:fb68b10
  • zgc:110409
  • zgc:110794
Danio rerio (zebrafish)
Collagen chain trimerization
  • alpha2(I)
  • alpha3(I)
  • col1a1b
  • col1a2
  • col1a3
  • col27a1
  • col27a1b
  • col28a1
  • col28a1a
  • col28a1b
  • col28a1c
  • col28a1d
  • col2a1
  • col2a1a
  • coll2a1
  • fb38c06
  • fc10c01
  • fj59a10
  • hm:zeh0348
  • hm:zehn2357
  • si:ch211-174d12.1
  • si:ch211-174d12.4
  • slc35c2
  • wu:fa95h05
  • wu:fa98d05
  • wu:fa99g10
  • wu:fb04c08
  • wu:fb11d06
  • wu:fb38c06
  • wu:fb99e07
  • wu:fc10c01
  • wu:fc49g11
  • wu:fd02a10
  • wu:fi09e02
  • wu:fj59a10
  • zehn2357
  • zgc:55285
  • zgc:77328
Danio rerio (zebrafish)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • amfra
  • cdc48
  • engase
  • hm:zeh0386
  • ik:tdsubc_1f2
  • ngly1
  • psmc1
  • psmc1a
  • psmc1b
  • rad23ab
  • rps27a
  • saks1
  • tdsubc_1f2
  • uba52
  • ubxn1
  • vcp
  • wu:fa91f08
  • wu:fb05d04
  • wu:fj14c10
  • xx:tdsubc_1f2
  • zgc:123344
  • zgc:56516
  • zgc:66168
  • zgc:86923
Danio rerio (zebrafish)
Digestion of dietary carbohydrate
  • amy2a
  • amy3
  • chia.2
  • chia.3
  • chioIa
  • chioIb
  • wu:fb61c11
  • wu:fb64c06
  • wu:fd61a02
  • wu:fi13f01
  • zgc:55406
  • zgc:55941
  • zgc:66270
  • zgc:77877
  • zgc:77889
  • zgc:77912
Danio rerio (zebrafish)
Tie2 Signaling
  • ang1
  • ang2-1
  • angpt1
  • angpt2a
  • fb18e12
  • fj59e07
  • grb2
  • grb2a
  • grb2b
  • hrasb
  • hrasl
  • nras
  • pik3ca
  • pik3cb
  • pik3r1
  • pik3r2
  • sos1
  • tek
  • tie-2
  • tie2
  • wu:fb18e12
  • wu:fb34e06
  • wu:fb65b05
  • wu:fc76g06
  • wu:fj59e07
  • zgc:103549
  • zgc:110734
  • zgc:158274
  • zgc:73077
Danio rerio (zebrafish)
Miscellaneous transport and binding events
  • ankh
  • ankhb
  • ctns
  • lrrc8a
  • lrrc8aa
  • lrrc8ab
  • lrrc8d
  • lrrc8db
  • magt1
  • nipa1
  • nipal3
  • npal3
  • si:zfos-323e3.4
  • wu:fb18g12
  • wu:fc12a05
  • wu:fi21b10
  • zgc:101743
  • zgc:110194
  • zgc:153223
  • zgc:92224
Danio rerio (zebrafish)
VxPx cargo-targeting to cilium
  • arf4a
  • pkd2
  • rab11a
  • rab11fip3
  • rab3ip
  • rab8
  • rab8a
  • rho
  • wu:fi15h09
  • zfo2
  • zgc:101030
  • zgc:103679
  • zgc:110270
  • zgc:162699
  • zgc:174360
Danio rerio (zebrafish)
Axonal growth inhibition (RHOA activation)
  • arhgdia
  • fb64c01
  • im:7136397
  • lingo1
  • lingo1b
  • lingo4b
  • mag
  • ngfrb
  • ngfrl
  • rhoac
  • rtn1
  • rtn1a
  • rtn4b
  • rtn5
  • rtn6
  • siglec-4
  • wu:fa96g11
  • wu:fb64c01
  • wu:fc07e07
  • wu:fq24d12
  • zgc:113566
  • zgc:198379
  • zgc:55554
  • zgc:73298
  • zgc:77681
  • zgc:86778
Danio rerio (zebrafish)
Axonal growth stimulation
  • arhgdia
  • ngf
  • ngfb
  • ngfrb
  • ngfrl
  • rhoac
  • wu:fa96g11
  • zgc:55554
  • zgc:77681
Danio rerio (zebrafish)
Sema4D induced cell migration and growth-cone collapse
  • arhgef11
  • erbb2
  • plxnb1b
  • rhoac
  • rnd1a
  • rnd1b
  • rnd1l
  • rock2
  • rock2a
  • rok2
  • wu:fk50c04
  • wu:fv70f10
  • zgc:153089
  • zgc:63601
Danio rerio (zebrafish)
Aggrephagy
  • arl13b
  • arl2l1
  • cb741
  • cftr
  • dj1
  • dlc-1
  • dncli2
  • dnl2
  • dnl2l
  • dync1i2a
  • dync1li1
  • dynll2a
  • dynll2b
  • fc73a07
  • hdac6
  • hm:zeh0386
  • ik:tdsubc_1f2
  • im:7136154
  • park2
  • park7
  • prkn
  • rps27a
  • si:ch211-123f21.1
  • si:dkey-63j1.8
  • tdsubc_1f2
  • uba52
  • ube2n
  • ube2na
  • ube2v1
  • wu:fa91f08
  • wu:fb11b03
  • wu:fc08b06
  • wu:fc73a07
  • xx:tdsubc_1f2
  • zgc:110812
  • zgc:112390
  • zgc:123326
  • zgc:123344
  • zgc:55726
  • zgc:66081
  • zgc:66168
Danio rerio (zebrafish)
ARMS-mediated activation
  • arms
  • crk
  • fb34h10
  • fc05a01
  • fi19g05
  • kidins220
  • kidins220b
  • ngf
  • ngfb
  • rap1a
  • rap1aa
  • wu:fb34h10
  • wu:fc05a01
  • wu:fc54a04
  • wu:fc66g06
  • wu:fi19g05
  • zgc:100936
  • zgc:86676
Danio rerio (zebrafish)
Dectin-2 family
  • asgr1a
  • cd247l
  • cldc1
  • fynb
  • heg
  • illr1
  • illr4
  • illrL
  • im:7156386
  • si:ch211-125e6.12
  • si:ch211-125e6.13
  • si:ch211-154o6.6
  • si:ch73-361h17.1
  • si:ch73-86n18.1
  • zgc:152681
  • zgc:174904
Danio rerio (zebrafish)
Asparagine N-linked glycosylation
  • asgr1a
  • cldc1
  • si:ch211-125e6.12
  • si:ch211-125e6.13
  • si:ch211-154o6.6
  • si:ch73-361h17.1
  • si:ch73-86n18.1
Danio rerio (zebrafish)
Acyl chain remodelling of PC
  • aytl1
  • aytl2
  • cpla2
  • im:7137034
  • im:7138859
  • lpcat1
  • lpcat2
  • pla2g10
  • pla2g12a
  • pla2g3
  • pla2g4
  • pla2g4a
  • plbd1
  • plbd1a
  • rarres3l
  • tmem86a
  • tmem86b
  • zgc:101699
  • zgc:113571
  • zgc:153124
  • zgc:162119
Danio rerio (zebrafish)
Acyl chain remodelling of PG
  • aytl2
  • cpla2
  • crls1
  • fc21c12
  • fj66b10
  • lpcat1
  • lpgat1
  • pla2g10
  • pla2g12a
  • pla2g3
  • pla2g4
  • pla2g4a
  • si:dkey-30h14.2
  • wu:fc21c12
  • wu:fj66b10
  • zgc:112278
  • zgc:162119
  • zgc:85909
Danio rerio (zebrafish)
Lactose synthesis
  • b4galt1l
  • fc29a02
  • glut1
  • glut1a
  • glut1b
  • lys-C
  • lyz
  • slc2a1
  • slc2a1a
  • wu:fc29a02
  • zgc:136734
  • zgc:154116
Danio rerio (zebrafish)
Effects of PIP2 hydrolysis
  • bZ1P14.9
  • fb09d10
  • fv43b11
  • prkcd
  • prkcda
  • prkceb
  • prkcha
  • si:rp71-1p14.9
  • trpc6
  • trpc6a
  • trpc7b
  • wu:fb09d10
  • wu:fv43b11
  • zgc:172124
  • zgc:56558
Danio rerio (zebrafish)
Apoptotic execution phase
  • bcap31
  • casp10
  • casp8l2
  • dnm1l
  • si:bz30i22.4
  • si:rp71-30i22.4
  • stk24a
  • zgc:163071
  • zgc:56389
Danio rerio (zebrafish)
Crosslinking of collagen fibrils
  • bmp1a
  • lox
  • loxa
  • loxl1
  • loxl2b
  • loxl3b
  • mfn
  • si:ch211-238c15.1
  • tld
  • tll1
  • tolloid
  • zgc:77447
Danio rerio (zebrafish)
Nectin/Necl trans heterodimerization
  • cadm1b
  • nectin1b
  • nectin3
  • pvrl1b
  • pvrl3l
  • sc:d0664
Danio rerio (zebrafish)
Nicotinate metabolism
  • cb1024
  • id:ibd5068
  • im:7144541
  • mibp
  • nadka
  • nadsyn1
  • nmnat1
  • nmnat2
  • nt5e
  • urk
  • zgc:110083
  • zgc:110243
  • zgc:63784
Danio rerio (zebrafish)

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Last updated: August 19, 2024