GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **1976 - 2000** of **2074** in total

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Pathway Name	Protein Name	UniProt ID ▲	Gene Symbol	Organism
Defective MOGS causes CDG-2b	Mannosyl-oligosaccharide glucosidase	Q13724	GCS1 MOGS	Homo sapiens (human)
RUNX3 regulates RUNX1-mediated transcription	Core-binding factor subunit beta Runt-related transcription factor 3	Q13761 Q13951	AML2 CBFA3 CBFB PEBP2A3 RUNX3	Homo sapiens (human)
Defective POMGNT1 causes MDDGA3, MDDGB3 and MDDGC3	Dystroglycan 1 Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1	Q14118 Q8WZA1	DAG1 MGAT1.2 POMGNT1	Homo sapiens (human)
Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2	Dystroglycan 1 Protein O-mannosyl-transferase 1 Protein O-mannosyl-transferase 2	Q14118 Q9UKY4 Q9Y6A1	DAG1 POMT1 POMT2	Homo sapiens (human)
Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1	Dystroglycan 1 Protein O-mannosyl-transferase 1 Protein O-mannosyl-transferase 2	Q14118 Q9UKY4 Q9Y6A1	DAG1 POMT1 POMT2	Homo sapiens (human)
IRF3 mediated activation of type 1 IFN	E3 ubiquitin-protein ligase DTX4 Interferon regulatory factor 3 NACHT, LRR and PYD domains-containing protein 4 Serine/threonine-protein kinase TBK1 Z-DNA-binding protein 1	Q14653 Q96MN2 Q9H171 Q9UHD2 Q9Y2E6	C20orf183 DLM1 DTX4 IRF3 KIAA0937 NAK NALP4 NLRP4 PAN2 PYPAF4 RNF155 RNH2 TBK1 ZBP1	Homo sapiens (human)
Toll Like Receptor 9 (TLR9) Cascade	Early endosome antigen 1 Phosphatidylinositol 3-kinase catalytic subunit type 3 Phosphoinositide 3-kinase regulatory subunit 4 Rabenosyn-5 Toll-like receptor 9	Q15075 Q8NEB9 Q99570 Q9H1K0 Q9NR96	EEA1 PIK3C3 PIK3R4 RBSN TLR9 VPS15 VPS34 ZFYVE2 ZFYVE20	Homo sapiens (human)
Pyrophosphate hydrolysis	Inorganic pyrophosphatase 2, mitochondrial Inorganic pyrophosphatase Phospholysine phosphohistidine inorganic pyrophosphate phosphatase	Q15181 Q9H008 Q9H2U2	IOPPP LHPP PP PPA1 PPA2	Homo sapiens (human)
Cellular response to hypoxia	Endothelial PAS domain-containing protein 1 Hypoxia-inducible factor 1-alpha inhibitor Hypoxia-inducible factor 1-alpha	Q16665 Q99814 Q9NWT6	BHLHE73 BHLHE78 EPAS1 FIH1 HIF1A HIF1AN HIF2A MOP1 MOP2 PASD2 PASD8	Homo sapiens (human)
Proton-coupled neutral amino acid transporters	Proton-coupled amino acid transporter 1 Proton-coupled amino acid transporter 2	Q495M3 Q7Z2H8	PAT1 PAT2 SLC36A1 SLC36A2 TRAMD1	Homo sapiens (human)
Organic anion transport	Organic anion transporter 3 Solute carrier family 22 member 11 Solute carrier family 22 member 12 Solute carrier family 22 member 6 Solute carrier family 22 member 7	Q4U2R8 Q8TCC7 Q96S37 Q9NSA0 Q9Y694	NLT OAT1 OAT2 OAT3 OAT4 OATL4 PAHT SLC22A11 SLC22A12 SLC22A6 SLC22A7 SLC22A8 URAT1	Homo sapiens (human)
SDK interactions	Protein sidekick-1 Protein sidekick-2	Q58EX2 Q7Z5N4	KIAA1514 SDK1 SDK2	Homo sapiens (human)
Cilium Assembly	Alpha-tubulin N-acetyltransferase 1 Histone deacetylase 6	Q5SQI0 Q9UBN7	ATAT1 C6orf134 HDAC6 KIAA0901 MEC17	Homo sapiens (human)
MPS IIIC - Sanfilippo syndrome C	Heparan-alpha-glucosaminide N-acetyltransferase	Q68CP4	HGSNAT TMEM76	Homo sapiens (human)
Defective SLC6A19 causes Hartnup disorder (HND)	Sodium-dependent neutral amino acid transporter B(0)AT1	Q695T7	B0AT1 SLC6A19	Homo sapiens (human)
Defective SLC6A19 causes Hartnup disorder (HND)	Sodium-dependent neutral amino acid transporter B(0)AT1	Q695T7	B0AT1 SLC6A19	Homo sapiens (human)
Oleoyl-phe metabolism	N-fatty-acyl-amino acid synthase/hydrolase PM20D1	Q6GTS8	PM20D1	Homo sapiens (human)
rRNA modification in the mitochondrion	5-methylcytosine rRNA methyltransferase NSUN4 Dimethyladenosine transferase 1, mitochondrial Transcription termination factor 4, mitochondrial rRNA methyltransferase 1, mitochondrial rRNA methyltransferase 2, mitochondrial rRNA methyltransferase 3, mitochondrial	Q6IN84 Q7Z6M4 Q8WVM0 Q96CB9 Q9HC36 Q9UI43	FJH1 FTSJ2 MRM1 MRM2 MRM3 MTERF4 MTERFD2 NSUN4 RNMTL1 TFB1M	Homo sapiens (human)
ALKBH2 mediated reversal of alkylation damage	DNA oxidative demethylase ALKBH2	Q6NS38	ABH2 ALKBH2	Homo sapiens (human)
Defective SLC39A4 causes acrodermatitis enteropathica, zinc-deficiency type (AEZ)	Zinc transporter ZIP4	Q6P5W5	SLC39A4 ZIP4	Homo sapiens (human)
Reversal of alkylation damage by DNA dioxygenases	Alpha-ketoglutarate-dependent dioxygenase FTO RNA demethylase ALKBH5	Q6P6C2 Q9C0B1	ABH5 ALKBH5 FTO KIAA1752 OFOXD1	Homo sapiens (human)
Phase 1 - inactivation of fast Na+ channels	A-type potassium channel modulatory protein KCNIP1 A-type potassium channel modulatory protein KCNIP2 A-type voltage-gated potassium channel KCND1 A-type voltage-gated potassium channel KCND2 A-type voltage-gated potassium channel KCND3 Calsenilin Kv channel-interacting protein 4	Q6PIL6 Q9NS61 Q9NSA2 Q9NZI2 Q9NZV8 Q9UK17 Q9Y2W7	CALP CSEN DREAM KCHIP1 KCHIP2 KCHIP3 KCHIP4 KCND1 KCND2 KCND3 KCNIP1 KCNIP2 KCNIP3 KCNIP4 KIAA1044 VABP	Homo sapiens (human)
Glycerophospholipid catabolism	Glycerophosphocholine cholinephosphodiesterase ENPP6 Glycerophosphodiester phosphodiesterase 1 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Lysophospholipase D GDPD1 Lysophospholipase D GDPD3 Patatin-like phospholipase domain-containing protein 6 Patatin-like phospholipase domain-containing protein 7	Q6UWR7 Q6ZV29 Q7L5L3 Q8IY17 Q8N9F7 Q8WTR4 Q9NZC3	C9orf111 ENPP6 GDE1 GDE2 GDE4 GDE7 GDPD1 GDPD3 GDPD5 MIR16 NTE PNPLA6 PNPLA7	Homo sapiens (human)
FASTK family proteins regulate processing and stability of mitochondrial RNAs	FAST kinase domain-containing protein 2, mitochondrial FAST kinase domain-containing protein 4 FAST kinase domain-containing protein 5, mitochondrial	Q7L8L6 Q969Z0 Q9NYY8	CPR2 FASTKD2 FASTKD4 FASTKD5 KIAA0948 KIAA0971 KIAA1792 TBRG4	Homo sapiens (human)
TWIK-related spinal cord K+ channel (TRESK)	Potassium channel subfamily K member 18	Q7Z418	KCNK18 TRESK TRIK	Homo sapiens (human)

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