GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 301 - 325 of 360 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Signaling by EGFR
  • AAMP
  • AREG
  • BTC
  • DTR
  • EGF
  • EGFR
  • EREG
  • FAM83A
  • FAM83B
  • FAM83D
  • HBEGF
  • HEGFL
  • LRIG1
  • SRC
  • TGFA
Sus scrofa (pig)
Signaling by ERBB2
  • BTC
  • CDC37
  • DTR
  • EGF
  • EGFR
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • FYN
  • HBEGF
  • HEGFL
  • HSP90A
  • HSP90AA1
  • HSPCA
  • NRG1
  • NRG2
  • NRG3
  • SRC
  • YES1
Sus scrofa (pig)
Signaling by ERBB4
  • BTC
  • DTR
  • EGF
  • EGFR
  • ERBB3
  • ERBB4
  • EREG
  • HBEGF
  • HEGFL
  • NRG1
  • NRG2
  • NRG3
Sus scrofa (pig)
Signaling by Erythropoietin
  • EPOR
  • IRS2
  • JAK2
  • LYN
Sus scrofa (pig)
Signaling by Insulin receptor
  • INS
  • INSR
Sus scrofa (pig)
Signaling by PDGF
  • COL4A1
  • COL4A2
  • COL4A3
  • COL4A4
  • COL4A5
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL9A1
  • COL9A2
  • COL9A3
  • FURIN
  • OPN
  • PDGFA
  • PDGFB
  • PDGFC
  • PDGFD
  • PDGFRA
  • PDGFRB
  • PLAT
  • PLG
  • PTPN12
  • SPP1
  • THBS1
  • THBS2
  • THBS3
  • THBS4
Sus scrofa (pig)
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
  • CILP
  • IGF1
  • IGF1R
  • IGF2
Sus scrofa (pig)
Sphingolipid catabolism
  • ACER1
  • ACER2
  • ACER3
  • ALDH3A2
  • ALDH3B1
  • ALDH3B2
  • LPP1
  • PLPP1
  • PLPP3
  • PPAP2A
  • SGPL1
  • SGPP1
  • SGPP2
Sus scrofa (pig)
Sphingolipid de novo biosynthesis
  • ABCC1
  • ABCG2
  • ABCG2A
  • BMDP
  • CERS1
  • CERS2
  • CERS4
  • CERS5
  • CYB5B
  • DEGS1
  • DEGS2
  • FA2H
  • GDF1
  • KDSR
  • LASS4
  • MFSD2B
  • ORMDL1
  • SAMD8
  • SGMS1
  • SGMS2
  • SPHK1
  • SPHK2
  • SPNS2
  • SPTLC1
  • SPTLC2
  • SPTLC3
  • SPTSSA
  • SPTSSB
Sus scrofa (pig)
Striated Muscle Contraction
  • ACTN2
  • ACTN3
  • DES
  • DMD
  • MLC-2V
  • MLC2V
  • MYBPC2
  • MYBPC3
  • MYH3
  • MYH8
  • MYL1
  • MYL2
  • MYL3
  • MYL4
  • NEB
  • PALLD
  • TCAP
  • TMOD2
  • TMOD3
  • TMOD4
  • TNNC
  • TNNC1
  • TNNC2
  • TNNI1
  • TNNI2
  • TNNT1
  • TNNT2
  • TNNT3
  • TPM2
  • TPM4
  • VIM
Sus scrofa (pig)
Sulfur amino acid metabolism
  • AHCY
  • BHMT
  • BHMT2
  • MAT1A
  • MTR
  • MTRR
  • bhmt
Sus scrofa (pig)
Surfactant metabolism
  • A2AR
  • ABCA3
  • ADA2
  • ADGRF5
  • ADORA2A
  • ADORA2B
  • ADRA2A
  • ADRA2C
  • CCDC59
  • CKAP4
  • CTSH
  • GATA6
  • LMCD1
  • NAPSA
  • P2RY2
  • PGA
  • SFTPB
  • SFTPC
  • SFTPD
  • SLC34A1
  • SLC34A2
  • SP-C
  • TTF1
  • ZDHHC2
Sus scrofa (pig)
Syndecan interactions
  • FGF2
  • ITGA2
  • ITGA6
  • ITGAV
  • ITGB1
  • ITGB3
  • ITGB4
  • ITGB5
  • PRKCA
  • SDC1
  • SDC2
  • SDC3
  • SDC4
  • TGFB1
  • VTN
Sus scrofa (pig)
Synthesis of 5-eicosatetraenoic acids
  • ALOX5
  • LTC4S
  • PON1
  • PON2
  • PON3
Sus scrofa (pig)
Synthesis of IP3 and IP4 in the cytosol
  • CALM3
  • INPP5D
  • INPP5J
  • INPPL1
  • ITPK1
  • ITPKA
  • ITPKC
  • OCRL
  • PLCB1
  • PLCB2
  • PLCB3
  • PLCB4
  • PLCD1
  • PLCD3
  • PLCD4
  • PLCE1
  • PLCG1
  • PLCG2
  • PLCH1
  • PLCH2
  • PLCZ1
  • PLD4
  • PTEN
  • SYNJ1
Sus scrofa (pig)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • ABCC1
  • ALOX15
  • ALOX5
  • CYP4A21
  • CYP4A23
  • CYP4A24
  • CYP4A90
  • CYP4B1
  • CYP4F22
  • CYP4F3
  • CYP4F52
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • LOC110255311
  • LOC110259328
  • LOC110259329
  • LTA4H
  • LTC4S
  • MAPKAPK2
  • RDP
Sus scrofa (pig)
Synthesis of PC
  • ABHD3
  • ACHE
  • CEPT1
  • CHAT
  • CHKA
  • CHKB
  • CHPT1
  • CK2N
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • CTL2
  • CTL4
  • LPCAT1
  • LPIN1
  • LPIN2
  • LPIN3
  • MFSD2A
  • PCTP
  • PCYT1A
  • PCYT1B
  • PEMT
  • PHOSPHO1
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • STARD10
  • STARD7
  • TPPT1
Sus scrofa (pig)
Synthesis, secretion, and deacylation of Ghrelin
  • GCG
  • GH1
  • GHRL
  • IGF1
  • INS
  • LEP
  • MBOAT4
  • OB
  • OBS
  • PLA2G7
  • SPCS1
  • SPCS2
  • SPCS3
Sus scrofa (pig)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • CD26
  • DPP4
  • FFAR4
  • GCG
  • GNB1
  • GNB3
  • GPR119
  • GPR120
  • GRP
  • LEP
  • O3FAR1
  • OB
  • OBS
Sus scrofa (pig)
Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
  • CD26
  • DPP4
  • GIP
  • GPR119
Sus scrofa (pig)
TAK1-dependent IKK and NF-kappa-B activation
  • A4
  • AD1
  • AGER
  • ALPK1
  • APP
  • CHUK
  • IKBA
  • IKBKB
  • IKBKG
  • IRAK1
  • IRAK2
  • MAP3K7
  • NFKB1
  • NFKB2
  • NFKB2_tv2
  • NFKBIA
  • NKIRAS1
  • NKIRAS2
  • RELA
  • RPS27A
  • S100A12
  • S100B
  • TAB1
  • TAB2
  • TAB3
  • TAK1b
  • TIFA
  • TRAF6
  • UBA52
  • UBB
  • UBC
  • UBE2NL
  • USP18
Sus scrofa (pig)
TFAP2 (AP-2) family regulates transcription of growth factors and their receptors
  • ATAD2
  • CGA
  • ESR
  • ESR1
  • LHB
  • NR3A1
Sus scrofa (pig)
TGF-beta receptor signaling activates SMADs
  • CBL
  • FKBP1A
  • FURIN
  • ITGA8
  • ITGAV
  • ITGB1
  • ITGB3
  • ITGB5
  • ITGB6
  • ITGB8
  • LTBP1
  • LTBP3
  • LTBP4
  • MADH3
  • MADH4
  • NEDD8
  • SMAD2
  • SMAD3
  • SMAD4
  • TGFB1
  • TGFB2
  • TGFB3
  • TGFBR1
  • TGFBR2
  • TGFBR3
  • UBE2M
  • ZFYVE9
Sus scrofa (pig)
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
  • ARHGEF18
  • CGN
  • F11R
  • PARD3
  • PARD6A
  • PRKCZ
  • RHOA
  • RPS27A
  • SMURF1
  • TGFB1
  • TGFBR1
  • TGFBR2
  • UBA52
  • UBB
  • UBC
Sus scrofa (pig)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
  • BIRC2
  • CD40
  • CD40LG
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • PIAP
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFRSF5
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TRAF2
  • TRAF3
Sus scrofa (pig)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024