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Guidelines

MIRAGE

autophagy related 3

Summary

Gene Symbol

Atg3

Organism

Rattus norvegicus (Norway rat)

External Links

NCBI Gene

171415

PubChem

171415

Alliance of Genome Resources

RGD:708464

Annotation

Keyword

Acetylation
Autophagy
Cytoplasm
Isopeptide bond
Protein transport
Reference proteome
Transferase
Ubl conjugation
Ubl conjugation pathway

Proteins

Displaying **all 3** entries
UniProt	Protein Name
A6IQZ3	Autophagy-related protein 3
A6IQZ2	Autophagy-related protein 3
Q6AZ50	Autophagy-related protein 3 Preconditioning-inducible gene 1 protein

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 22 in total

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GO Term	Evidence Code	PMID
autophagosome assembly	ISS
autophagosome assembly	ISO
autophagosome assembly	IBA
autophagosome assembly	IEA
autophagy of mitochondrion	IBA

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

organonitrogen compound metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

post-translational protein modification [inference]

protein modification by small protein conjugation or removal [inference]

protein modification by small protein conjugation [inference]

protein ubiquitination

catabolic process [inference]

cellular catabolic process [inference]

autophagy of mitochondrion

cellular metabolic process [inference]

cellular catabolic process [inference]

autophagy of mitochondrion

primary metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

post-translational protein modification [inference]

protein modification by small protein conjugation or removal [inference]

protein modification by small protein conjugation [inference]

protein ubiquitination

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

post-translational protein modification [inference]

protein modification by small protein conjugation or removal [inference]

protein modification by small protein conjugation [inference]

protein ubiquitination

macromolecule modification [inference]

protein modification process [inference]

post-translational protein modification [inference]

protein modification by small protein conjugation or removal [inference]

protein modification by small protein conjugation [inference]

protein ubiquitination

organonitrogen compound metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

post-translational protein modification [inference]

protein modification by small protein conjugation or removal [inference]

protein modification by small protein conjugation [inference]

protein ubiquitination

cellular process [inference]

cellular metabolic process [inference]

cellular catabolic process [inference]

autophagy of mitochondrion

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

process utilizing autophagic mechanism [inference]

autophagy of mitochondrion

cellular component organization or biogenesis [inference]

cellular component organization [inference]

organelle organization [inference]

mitochondrion organization [inference]

autophagy of mitochondrion

apoptotic mitochondrial changes [inference]

mitochondrial fragmentation involved in apoptotic process

vacuole organization [inference]

autophagosome organization [inference]

autophagosome assembly

organelle assembly [inference]

autophagosome assembly

organelle disassembly [inference]

autophagy of mitochondrion

cellular component disassembly [inference]

organelle disassembly [inference]

autophagy of mitochondrion

cellular component assembly [inference]

organelle assembly [inference]

autophagosome assembly

localization [inference]

macromolecule localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

establishment of localization [inference]

transport [inference]

organic substance transport [inference]

protein transport

nitrogen compound transport [inference]

protein transport

establishment of protein localization [inference]

protein transport

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

biological regulation [inference]

regulation of biological process [inference]

regulation of localization [inference]

regulation of transport [inference]

negative regulation of transport [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

regulation of vesicle-mediated transport [inference]

regulation of endocytosis [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

regulation of phagocytosis [inference]

negative regulation of phagocytosis

negative regulation of biological process [inference]

negative regulation of cellular process [inference]

negative regulation of cellular component organization [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

negative regulation of transport [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

regulation of cellular process [inference]

regulation of cellular component biogenesis [inference]

regulation of cell projection assembly [inference]

regulation of plasma membrane bounded cell projection assembly [inference]

regulation of cilium assembly

regulation of organelle assembly [inference]

regulation of cilium assembly

negative regulation of cellular process [inference]

negative regulation of cellular component organization [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

regulation of cellular component organization [inference]

regulation of endocytosis [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

regulation of phagocytosis [inference]

negative regulation of phagocytosis

regulation of cell projection organization [inference]

regulation of cell projection assembly [inference]

regulation of plasma membrane bounded cell projection assembly [inference]

regulation of cilium assembly

regulation of plasma membrane bounded cell projection organization [inference]

regulation of plasma membrane bounded cell projection assembly [inference]

regulation of cilium assembly

regulation of organelle organization [inference]

regulation of organelle assembly [inference]

regulation of cilium assembly

negative regulation of cellular component organization [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

regulation of vesicle-mediated transport [inference]

regulation of endocytosis [inference]

negative regulation of endocytosis [inference]

negative regulation of phagocytosis

regulation of phagocytosis [inference]

negative regulation of phagocytosis

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
phagophore assembly site	IBA
cytoplasm	ISO
cytoplasm	IEA
cytosol	ISO
cytosol	IBA

GO Hierarchy

cellular component

protein-containing complex [inference]

catalytic complex [inference]

transferase complex [inference]

Atg12-Atg5-Atg16 complex

cellular anatomical entity [inference]

Displaying entries **1 - 5** of 15 in total

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GO Term	Evidence Code	PMID
Atg8-family ligase activity	ISS
Atg8-family ligase activity	ISO
Atg8-family ligase activity	IEA
Atg12 transferase activity	ISS
Atg12 transferase activity	ISO

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

acyltransferase activity [inference]

aminoacyltransferase activity [inference]

ubiquitin-like protein transferase activity

Atg12 transferase activity

ubiquitin-like protein conjugating enzyme activity [inference]

Atg8-family conjugating enzyme activity

ubiquitin-like protein ligase activity [inference]

Atg8-family ligase activity

catalytic activity, acting on a protein [inference]

ubiquitin-like protein transferase activity

Atg12 transferase activity

ubiquitin-like protein conjugating enzyme activity [inference]

Atg8-family conjugating enzyme activity

ubiquitin-like protein ligase activity [inference]

Atg8-family ligase activity

binding [inference]

protein binding [inference]

enzyme binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Autophagy-related protein 3

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
T: Signal transduction mechanisms

Displaying **all 3** entries
Gene Ontology
Atg8-family ligase activity
autophagosome assembly
nucleophagy

Displaying **all 2** entries
InterPro
Autophagy-related protein 3
Ubiquitin-like-conjugating enzyme Atg3/Atg10

Ortholog

Displaying entries **1 - 10** of 80 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Homo sapiens	64422	Xenbase:XB-GENE-953266	HUMAN71500
Mus musculus	67841		MOUSE17800
Xenopus tropicalis	171415	Xenbase:XB-GENE-953266
Danio rerio	336632	Xenbase:XB-GENE-953266	DANRE38327
Pan troglodytes	470880		PANTR31832
Canis lupus familiaris	478564		CANLF13292
Bos taurus	508571		BOVIN14488
Macaca mulatta	708305		MACMU28219
Xenopus tropicalis	855741	Xenbase:XB-GENE-953266
Monodelphis domestica	100010740		MONDO21687

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Last updated: December 8, 2025