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rhodopsin, like

Summary

Gene Symbol

rhol

Organism

Danio rerio (zebrafish)

External Links

NCBI Gene

562845

PubChem

562845

Alliance of Genome Resources

ZFIN:ZDB-GENE-070424-6

Annotation

Keyword

Disulfide bond
G-protein coupled receptor
Glycoprotein
Lipoprotein
Metal-binding
Phosphoprotein
Proteomics identification
Reference proteome
Retinal protein
Transmembrane helix
Vision
Zinc

Proteins

Displaying 1 entry
UniProt	Protein Name
A4FUN8

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 7 in total

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2

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GO Term	Evidence Code	PMID
signal transduction	IEA
G protein-coupled receptor signaling pathway	IBA
G protein-coupled receptor signaling pathway	IEA
visual perception	IEA
phototransduction	IBA

GO Hierarchy

biological process

cellular process [inference]

signal transduction

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

response to stimulus [inference]

response to external stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

response to abiotic stimulus [inference]

response to radiation [inference]

response to light stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to light stimulus

cellular response to radiation [inference]

cellular response to light stimulus

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

detection of stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

biological regulation [inference]

regulation of biological process [inference]

regulation of cellular process [inference]

signal transduction

Displaying **all 3** entries
GO Term	Evidence Code	PMID
photoreceptor outer segment	IBA
plasma membrane	IBA
membrane	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

photoreceptor outer segment

membrane

plasma membrane

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
G protein-coupled receptor activity	IEA
G protein-coupled photoreceptor activity	IBA
photoreceptor activity	IDA	21447259 27811293
photoreceptor activity	IEA
retinal binding	IDA	27811293

GO Hierarchy

molecular function

binding [inference]

lipid binding [inference]

isoprenoid binding [inference]

retinoid binding [inference]

retinal binding

small molecule binding [inference]

vitamin binding [inference]

retinal binding

ion binding [inference]

cation binding [inference]

metal ion binding

molecular transducer activity [inference]

signaling receptor activity [inference]

transmembrane signaling receptor activity [inference]

G protein-coupled receptor activity

G protein-coupled photoreceptor activity

photoreceptor activity

G protein-coupled photoreceptor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

opsin

Functional Category

E: Amino acid transport and metabolism
K: Transcription
T: Signal transduction mechanisms

Displaying **all 2** entries
Gene Ontology
cellular response to light stimulus
phototransduction

Displaying **all 2** entries
InterPro
G protein-coupled receptor, rhodopsin-like
GPCR, rhodopsin-like, 7TM

Ortholog

Displaying **all 10** entries
Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Xenopus tropicalis	6010	Xenbase:XB-GENE-966887
Xenopus tropicalis	24717	Xenbase:XB-GENE-966887
Xenopus tropicalis	30295	Xenbase:XB-GENE-966887
Xenopus tropicalis	30459	Xenbase:XB-GENE-966887
Xenopus tropicalis	212541	Xenbase:XB-GENE-966887
Xenopus tropicalis	380209	Xenbase:XB-GENE-966887
Xenopus tropicalis	562845	Xenbase:XB-GENE-966887
Xenopus tropicalis	100037900	Xenbase:XB-GENE-966887
Sinocyclocheilus grahami	107551427		SINGR08966
Xenopus tropicalis	108715858	Xenbase:XB-GENE-966887