GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 226 - 250 of 557 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Hedgehog 'off' state
  • ADCY1
  • ADCY2
  • ADCY3
  • ADCY4
  • ADCY5
  • ADCY6
  • ADCY8
  • ADCY9
  • FUZ
  • GLI1
  • GLI2
  • GLI3
  • GPR161
  • IFT122
  • IFT140
  • IFT52
  • IFT57
  • IFT88
  • INTU
  • KIF3A
  • KIF7
  • OFD1
  • PDZD6
  • PRKACA
  • PRKACB
  • PRKAR1A
  • PRKAR1B
  • PRKAR2A
  • PTCH1
  • RPGRIP1L
  • SMO
  • SUFU
  • TTC21B
  • TULP3
  • WDR19
  • WDR35
Bos taurus (cattle)
Hedgehog 'on' state
  • CDC73
  • CUL3
  • DZIP1
  • EVC
  • EVC2
  • GLI1
  • GLI2
  • GLI3
  • GPR161
  • ITCH
  • KIF7
  • NUMB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • PTCH1
  • RPS27A
  • SMO
  • SMURF1
  • SMURF2
  • SPOP
  • SPOPL
  • SUFU
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • ULK3
Bos taurus (cattle)
Hedgehog ligand biogenesis
  • DERL2
  • DHH
  • ERLEC1
  • HHAT
  • IHH
  • OS9
  • P4HB
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SEL1L
  • SHH
  • SUG1
  • SYVN1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • VCP
Bos taurus (cattle)
Heme degradation
  • ABCC1
  • ABCC2
  • ABCG2
  • ALB
  • BLVRA
  • BLVRB
  • FABP1
  • GSTA1
  • GSTA2
  • GSTA5
  • HMOX1
  • HMOX2
  • MRP1
  • SCAN
  • SLCO1B3
  • SLCO2B1
  • UGT1A6
Bos taurus (cattle)
Heme signaling
  • APOA1
  • APOB
  • BACH1
  • HBA
  • HBB
  • HCP1
  • LY96
  • MAFK
  • MD-2
  • PCFT
  • PGRMC2
  • SLC46A1
  • TLR4
  • XPO1
Bos taurus (cattle)
Highly calcium permeable nicotinic acetylcholine receptors
  • CHRNA1
  • CHRNA2
  • CHRNA3
  • CHRNA4
  • CHRNA5
  • CHRNA6
  • CHRNB2
  • CHRNB3
  • CHRNB4
Bos taurus (cattle)
Highly calcium permeable postsynaptic nicotinic acetylcholine receptors
  • CHRNA1
  • CHRNA2
  • CHRNA3
  • CHRNA4
  • CHRNA5
  • CHRNA6
  • CHRNA7
  • CHRNA9
  • CHRNB2
  • CHRNB3
  • CHRNB4
Bos taurus (cattle)
Highly sodium permeable postsynaptic acetylcholine nicotinic receptors
  • CHRNA3
  • CHRNA4
  • CHRNB2
  • CHRNB4
  • CHRND
  • CHRNE
  • CHRNG
Bos taurus (cattle)
Hormone ligand-binding receptors
  • CGA
  • FSHB
  • FSHR
  • GNRH1
  • GNRH2
  • GNRHR
  • GPA2
  • GPB5
  • GPHA2
  • GPHB5
  • LHB
  • LHCGR
  • TSHB
  • TSHR
Bos taurus (cattle)
Hyaluronan biosynthesis and export
  • ABCC5
  • CEMIP
  • DERPC
  • HAS1
  • HAS2
Bos taurus (cattle)
Hyaluronan uptake and degradation
  • CD44
  • CHP
  • CHP1
  • CRSBP1
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • HYAL2
  • HYAL3
  • LYVE1
  • STAB2
  • XLKD1
Bos taurus (cattle)
Hydrolysis of LPC
  • CPLA2
  • LYPLA3
  • PLA2G15
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLBD1
Bos taurus (cattle)
IFNG signaling activates MAPKs
  • ERK2
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKM1
Bos taurus (cattle)
IL-6-type cytokine receptor ligand interactions
  • CLCF1
  • CNTF
  • CNTFR
  • CTF1
  • IL6ST
  • JAK1
  • JAK2
  • LIF
  • LIFR
  • OSM
  • TYK2
Bos taurus (cattle)
IRS-mediated signalling
  • IRS1
  • IRS2
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
Bos taurus (cattle)
IRS-related events triggered by IGF1R
  • IGF1
  • IGF1R
  • IGF2
  • IRS1
  • IRS2
  • IRS4
Bos taurus (cattle)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
  • AMICA1
  • B2M
  • BOLA
  • BOLA-NC1
  • C3
  • C5H12ORF53
  • CAR
  • CD18
  • CD19
  • CD1B5
  • CD200
  • CD200R
  • CD200R1
  • CD22
  • CD247
  • CD300A
  • CD300LB
  • CD300LF
  • CD300LG
  • CD3D
  • CD3E
  • CD3G
  • CD40
  • CD40LG
  • CD81
  • CD8A
  • CD8B
  • CD99
  • CLEC4G
  • CLM9
  • CLP1
  • COLEC12
  • CRTAM
  • CXADR
  • DAP10
  • FCGR1A
  • HCST
  • ICAM1
  • ICAM3
  • ICAM5
  • IFITM3
  • ITGA4
  • ITGAL
  • ITGB1
  • ITGB2
  • ITGB7
  • JAML
  • KIR2DL1
  • KIR2DL5A
  • KIR2DS1
  • KIR3DL2
  • KIR3DS1
  • KLRF1
  • KLRK1
  • LOC100138951
  • LOC100850276
  • LOC100852061
  • LOC112443864
  • LOC112444847
  • LOC512286
  • LOC515418
  • LOC526163
  • LOC534578
  • LOC613699
  • LOC616254
  • LOC618268
  • LOC618463
  • LOC777594
  • LOC783508
  • MIC2
  • NCR3
  • NCR3LG1
  • NECTIN2
  • NPDC1
  • OSCAR
  • PIANP
  • PILRA
  • SIGLEC1
  • SIGLEC10
  • SLAMF6
  • SLAMF7
  • TNFRSF5
  • TRAV29-1
  • TREM1
  • TREML1
  • TREML2
  • ULBP13
  • ULBP17
  • ULBP21
  • VCAM1
Bos taurus (cattle)
Inactivation of CSF3 (G-CSF) signaling
  • CSF3
  • CSF3R
  • CUL5
  • ELOC
  • GCSF
  • JAK1
  • JAK2
  • LYN
  • RNF7
  • RPS27A
  • SOCS1
  • SOCS3
  • SRC
  • SYK
  • TCEB1
  • TCEB2
  • TYK2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBC4
  • UBCEP1
  • UBCEP2
  • UBCH4
  • UBCH5B
  • UBE2D1
  • UBE2D2
  • UBE2D3
Bos taurus (cattle)
Inactivation, recovery and regulation of the phototransduction cascade
  • CALM
  • CAMKMT
  • CNCG
  • CNCG1
  • CNGA1
  • CNGB1
  • FNTA
  • FNTB
  • GCAP1
  • GNAT1
  • GNB5
  • GNGT1
  • GRK1
  • GRK4
  • GRK7
  • GUCA1
  • GUCA1A
  • GUCA1B
  • GUCY2D
  • GUCY2F
  • LOC786620
  • METAP1
  • METAP2
  • NMT1
  • NMT2
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEG
  • PPEF1
  • R9AP
  • RCV1
  • RCVRN
  • RGS9
  • RGS9BP
  • RHO
  • RHOK
  • SAG
Bos taurus (cattle)
Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
  • GABBR1
  • GABBR2
  • GIRK1
  • GIRK4
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • IRK1
  • KCNJ10
  • KCNJ12
  • KCNJ15
  • KCNJ16
  • KCNJ2
  • KCNJ3
  • KCNJ4
  • KCNJ5
  • KCNJ6
Bos taurus (cattle)
Initial triggering of complement
  • ADIB
  • C1QA
  • C1QB
  • C1QC
  • C1R
  • C1S
  • C2
  • C4A
  • COLEC10
  • COLEC11
  • FCN2
  • LOC107131209
  • MASP1
  • MASP2
  • MBL
Bos taurus (cattle)
Insulin receptor recycling
  • ATP6A1
  • ATP6AP1
  • ATP6B1
  • ATP6B2
  • ATP6C
  • ATP6D
  • ATP6E
  • ATP6G
  • ATP6G1
  • ATP6H
  • ATP6IP1
  • ATP6N1B
  • ATP6S1
  • ATP6S14
  • ATP6V0A1
  • ATP6V0A2
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E
  • ATP6V0E1
  • ATP6V0E2
  • ATP6V1A
  • ATP6V1A1
  • ATP6V1B1
  • ATP6V1B2
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1E2
  • ATP6V1F
  • ATP6V1G1
  • ATP6V1G2
  • ATP6V1G3
  • ATP6V1H
  • CTSD
  • IDE
  • INS
  • INSR
  • LOC101904667
  • PTPN1
  • PTPRF
  • TCIRG1
  • VATC
  • VATF
  • VPATPD
Bos taurus (cattle)
Insulin receptor signalling cascade
  • GRB10
  • GRB2
  • INS
  • INSR
  • SHC1
  • SOS1
Bos taurus (cattle)
Integrin cell surface interactions
  • BSG
  • CD18
  • CD44
  • CD47
  • CDH1
  • COL13A1
  • COL16A1
  • COL18A1
  • COL4A1
  • COL4A3
  • COMP
  • F11R
  • FBN1
  • FN1
  • IBSP
  • ICAM1
  • ICAM3
  • ICAM5
  • ITGA1
  • ITGA10
  • ITGA11
  • ITGA2
  • ITGA2B
  • ITGA3
  • ITGA4
  • ITGA6
  • ITGA9
  • ITGAL
  • ITGAM
  • ITGAV
  • ITGAX
  • ITGB1
  • ITGB2
  • ITGB3
  • ITGB5
  • ITGB6
  • ITGB7
  • ITGB8
  • JAM1
  • JAM2
  • LDC
  • LOC534578
  • LOC616254
  • LUM
  • P2RX5
  • PECAM1
  • SPP1
  • THBS1
  • TNC
  • VCAM1
  • VTN
Bos taurus (cattle)
Interaction With Cumulus Cells And The Zona Pellucida
  • ADAM2
  • B4GALT1
  • GALT
  • GGTB2
  • LOC509761
  • OVGP1
  • ZP2
  • ZP3
  • ZP4
  • ZPB
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024