GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 301 - 325 of 557 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
Nuclear Receptor transcription pathway
  • AD4BP
  • AR
  • ESR
  • ESR1
  • ESR2
  • ESRRA
  • ESRRB
  • ESRRG
  • FTZF1
  • HNF4A
  • HNF4G
  • LXRA
  • LXRB
  • MED1
  • NCOR1
  • NCOR2
  • NR0B1
  • NR0B2
  • NR1C3
  • NR1D1
  • NR1D2
  • NR1H2
  • NR1H3
  • NR1H4
  • NR1I2
  • NR1I3
  • NR2B3
  • NR2C1
  • NR2C2
  • NR2E1
  • NR2E3
  • NR2F1
  • NR2F6
  • NR3A1
  • NR3A2
  • NR3C1
  • NR3C2
  • NR4A1
  • NR4A2
  • NR4A3
  • NR5A1
  • NR5A2
  • NR6A1
  • NRBF2
  • PGR
  • PPARA
  • PPARD
  • PPARG
  • RARA
  • RARB
  • RARG
  • RORC
  • RXRA
  • RXRB
  • RXRG
  • TFCOUP1
  • THRA
  • THRB
  • VDR
Bos taurus (cattle)
APC/C:Cdc20 mediated degradation of mitotic proteins
  • ANAPC1
  • ANAPC10
  • ANAPC11
  • ANAPC15
  • ANAPC16
  • ANAPC2
  • ANAPC4
  • ANAPC5
  • ANAPC7
  • ANAPC8
  • BUB1B
  • BUB3
  • CDC16
  • CDC20
  • CDC23
  • CDC26
  • CDC27
  • MAD2L1
  • UBCH10
  • UBE2C
  • UBE2D1
  • UBE2E1
  • UBE2S
Bos taurus (cattle)
Erythrocytes take up oxygen and release carbon dioxide
  • AQP1
  • CA1
  • CA2
  • CA4
  • HBA
  • HBB
  • RHAG
  • SLC4A1
Bos taurus (cattle)
Erythrocytes take up carbon dioxide and release oxygen
  • AQP1
  • CA1
  • CA2
  • CA4
  • CYB5R1
  • CYB5R2
  • CYB5R4
  • CYB5RL
  • HBA
  • HBB
  • RHAG
  • SLC4A1
Bos taurus (cattle)
Rhesus glycoproteins mediate ammonium transport.
  • RHAG
  • RHBG
  • RHCG
Bos taurus (cattle)
Metabolism of Angiotensinogen to Angiotensins
  • ACE2
  • AGT
  • ATP6AP2
  • ATP6IP2
  • CES1
  • CPA3
  • CPB
  • CPB1
  • CPB2
  • CTSD
  • CTSZ
  • ENPEP
  • LOC100139881
  • LOC509956
  • LOC540321
  • LOC617313
  • MME
  • REN
  • SERPINA8
Bos taurus (cattle)
Transport of inorganic cations/anions and amino acids/oligopeptides
  • CTNS
  • EAAT1
  • GLAST
  • GLAST1
  • SAMC
  • SLC1A1
  • SLC1A2
  • SLC1A3
  • SLC1A6
  • SLC1A7
  • SLC25A26
  • SLC32A1
Bos taurus (cattle)
Glutamate Neurotransmitter Release Cycle
  • ARL6IP5
  • CPLX1
  • EAAT1
  • GLAST
  • GLAST1
  • GLS
  • GLS2
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • PRAF3
  • RAB3A
  • RIMS1
  • SLC17A7
  • SLC1A1
  • SLC1A2
  • SLC1A3
  • SLC1A6
  • SLC1A7
  • SLC38A2
  • SNAP25
  • SNAT2
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
  • VGLUT1
Bos taurus (cattle)
Norepinephrine Neurotransmitter Release Cycle
  • CPLX1
  • MAOA
  • OCT1
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A2
  • SLC22A1
  • SLC22A2
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Sensory perception of salty taste
  • SCNN1A
  • SCNN1B
  • SCNN1D
  • SCNN1G
Bos taurus (cattle)
Cilium Assembly
  • ATAT1
  • HDAC6
  • MEC17
Bos taurus (cattle)
Lysosomal oligosaccharide catabolism
  • LOC528518
  • MAN2B1
  • MAN2C1
  • MANB
  • MANBA
Bos taurus (cattle)
Digestion of dietary carbohydrate
  • CHIA
  • LCT
  • LOC539383
  • MGAM2
  • SI
Bos taurus (cattle)
RAF/MAP kinase cascade
  • ACTN2
  • AFGF
  • ANG1
  • ANGPT1
  • AREG
  • ARTN
  • BTC
  • CALM
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • CSF2
  • CSF2RB
  • DLG1
  • DLG3
  • DLG4
  • EGFR
  • EPGN
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • ERK2
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF19
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF5B
  • FGF5C
  • FGF6
  • FGF6A
  • FGF7
  • FGF7B
  • FGF8
  • FGF8A
  • FGF9
  • FGFA
  • FGFR1
  • FGFR2
  • FGFR3
  • FGFR4
  • FLT3
  • FLT3LG
  • FRS2
  • FRS3
  • FYN
  • Fgf4
  • GDNF
  • GFRA1
  • GFRA2
  • GFRA3
  • GFRA4
  • GRB2
  • HBEGF
  • HBGF-1
  • HGF
  • IL-2
  • IL2
  • IL2RA
  • IL2RG
  • IL3
  • IL3RA
  • IL5
  • IL5RA
  • IRS1
  • IRS2
  • JAK1
  • JAK2
  • JAK3
  • KIT
  • KITLG
  • KL
  • KLB
  • KRAS
  • LAT
  • MAPK1
  • MAPK3
  • MET
  • NEFL
  • NRAPGEP
  • NRAS
  • NRG1
  • NRG2
  • NRG3
  • NRTN
  • ODAD3
  • PDGFA
  • PDGFB
  • PDGFRA
  • PDGFRB
  • PDZGEF1
  • PEA15
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PRKM1
  • PTK2
  • PTPRA
  • RALGDS
  • RANBP9
  • RAPGEF2
  • RASGEF1A
  • RASGRF1
  • RASGRF2
  • RASGRP1
  • RASGRP3
  • RASGRP4
  • RET
  • RGL1
  • RGL2
  • RGL3
  • SCF
  • SHC1
  • SHC2
  • SHC3
  • SOS1
  • SPTA1
  • SPTAN1
  • SPTB
  • SPTBN2
  • SPTBN4
  • TEK
  • TGFA
  • TIE-2
  • TIE2
Bos taurus (cattle)
Striated Muscle Contraction
  • ACTN2
  • ACTN3
  • DES
  • DMD
  • MYBPC1
  • MYBPC3
  • MYH3
  • MYH6
  • MYH8
  • MYL1
  • MYL2
  • MYL4
  • NEB
  • TCAP
  • TMOD1
  • TMOD2
  • TMOD3
  • TMOD4
  • TNNC
  • TNNC1
  • TNNC2
  • TNNI1
  • TNNI2
  • TNNT1
  • TNNT2
  • TNNT3
  • TPM1
  • TPM2
  • TPM3
  • VIM
Bos taurus (cattle)
Sialic acid metabolism
  • CMAS
  • CTSA
  • GLB1
  • GNE
  • NANP
  • NANS
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • NPL
  • SIAT10
  • SLC17A5
  • SLC35A1
  • ST3GAL1
  • ST3GAL2
  • ST3GAL3
  • ST3GAL4
  • ST3GAL5
  • ST3GAL6
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC2
  • ST6GALNAC4
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA4
  • ST8SIA5
  • siat4B
Bos taurus (cattle)
Adrenaline signalling through Alpha-2 adrenergic receptor
  • ADRA2A
  • ADRA2B
  • ADRA2C
Bos taurus (cattle)
Dissolution of Fibrin Clot
  • ANX2
  • ANXA2
  • CAL1L
  • CLP11
  • HRG
  • LOC281376
  • LOC617406
  • PLAT
  • PLAU
  • PLAUR
  • PLG
  • PLI
  • S100A10
  • SERPINB8
  • SERPINE1
  • SERPINE2
  • SERPINF2
Bos taurus (cattle)
Adrenoceptors
  • ADRA1A
  • ADRA1B
  • ADRA1D
  • ADRA2A
  • ADRA2B
  • ADRA2C
  • ADRB1
  • ADRB2
  • ADRB3
Bos taurus (cattle)
Cargo concentration in the ER
  • AREG
  • CD59
  • CNIH
  • CNIH1
  • CTSC
  • CTSZ
  • F5
  • F8
  • FOLR3
  • GOSR2
  • GRIA1
  • LMAN1
  • LMAN1L
  • LMAN2
  • LMAN2L
  • MCFD2
  • MIA2
  • PI
  • PREB
  • RAB1B
  • SAR1B
  • SEC22B
  • SEC23A
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SERPINA1
  • STX5
  • TGFA
  • TMED10
  • TMP21
  • VIPL
Bos taurus (cattle)
COPII-mediated vesicle transport
  • ANKRD28
  • AREG
  • BET1
  • CD59
  • CNIH
  • CNIH1
  • CSNK1D
  • CTSC
  • CTSZ
  • F5
  • F8
  • FOLR3
  • GOLGA2
  • GORASP1
  • GOSR2
  • GRIA1
  • HCKID
  • LMAN1
  • LMAN1L
  • LMAN2
  • LMAN2L
  • MCFD2
  • NAPA
  • NAPB
  • NAPG
  • NSF
  • PI
  • PPP6C
  • PPP6R1
  • PPP6R3
  • PREB
  • RAB1A
  • RAB1B
  • SAPS3
  • SAR1B
  • SCFD1
  • SEC13
  • SEC13L1
  • SEC16A
  • SEC16B
  • SEC22A
  • SEC22B
  • SEC22C
  • SEC23A
  • SEC23IP
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SEC31A
  • SERPINA1
  • SNAPB
  • STX17
  • STX5
  • TBC1D20
  • TFG
  • TGFA
  • TMED10
  • TMP21
  • TRAPPC1
  • TRAPPC10
  • TRAPPC2
  • TRAPPC2L
  • TRAPPC3
  • TRAPPC4
  • TRAPPC5
  • TRAPPC6A
  • TRAPPC6B
  • TRAPPC9
  • USO1
  • VDP
  • VIPL
  • YKT6
Bos taurus (cattle)
Glycogen breakdown (glycogenolysis)
  • AGL
  • CALM
  • GAA
  • GYG1
  • GYG2
  • PHKA1
  • PHKA2
  • PHKG2
  • PYGL
  • PYGM
Bos taurus (cattle)
N-Glycan antennae elongation
  • B4GALT1
  • B4GALT2
  • B4GALT4
  • B4GALT5
  • B4GALT6
  • GALT
  • GGTB2
  • MGAT4A
  • MGAT4B
  • MGAT4C
  • MGAT5
  • ST3GAL4
  • ST8SIA2
  • ST8SIA3
Bos taurus (cattle)
N-glycan trimming and elongation in the cis-Golgi
  • MANEA
  • MGAT1
Bos taurus (cattle)
Reactions specific to the complex N-glycan synthesis pathway
  • CGA
  • CHST10
  • CHST8
  • FUCA1
  • FUT6
  • FUT8
  • LHB
  • MAN2A1
  • MAN2A2
  • MGAT2
Bos taurus (cattle)

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Last updated: August 19, 2024