GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 376 - 400 of 557 in total
Pathway Name Protein Name UniProt ID ▼ Gene Symbol Organism GlyTouCan ID
Interleukin-6 signaling
  • CBL
  • IL6
  • IL6R
  • IL6ST
  • JAK1
  • JAK2
  • PTPN11
  • SOCS3
  • STAT1
  • STAT3
  • TYK2
Bos taurus (cattle)
Regulation of KIT signaling
  • CBL
  • FYN
  • GRB2
  • KIT
  • KITLG
  • LCK
  • LYN
  • PTPN6
  • SCF
  • SH2B2
  • SOS1
  • SRC
  • YES1
Bos taurus (cattle)
Negative regulation of FGFR1 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF10
  • FGF17
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF5
  • FGF5C
  • FGF6
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR1
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • KL
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Negative regulation of FGFR2 signaling
  • AFGF
  • CBL
  • ERK2
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF5B
  • FGF5C
  • FGF6
  • FGF6A
  • FGF7
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR2
  • FRS2
  • Fgf4
  • GRB2
  • HBGF-1
  • MAPK1
  • MAPK3
  • PRKM1
  • PTPN11
  • RPS27A
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Detoxification of Reactive Oxygen Species
  • AOP1
  • AOP2
  • CAT
  • CCS
  • CYBA
  • CYBB
  • CYC
  • CYCS
  • ERO1A
  • ERO1L
  • GPX
  • GPX1
  • GPX3
  • GPX5
  • GPX7
  • GPX8
  • GSR
  • GSTP1
  • NCF1
  • NCF2
  • NCF4
  • NOX4
  • NOX5
  • NUDT2
  • P4HB
  • PHGPX
  • PRDX1
  • PRDX2
  • PRDX3
  • PRDX5
  • PRDX6
  • SOD1
  • SOD2
  • SOD3
  • TRXR2
  • TXN
  • TXN2
  • TXNRD1
  • TXNRD2
Bos taurus (cattle)
APAP ADME
  • ABCC1
  • ABCC2
  • ABCC3
  • ABCC5
  • ABCG2
  • ACY1
  • CNDP2
  • GGT1
  • GGT5
  • GGT7
  • GGTL3
  • GSTM4
  • GSTP1
  • GSTT1
  • LOC100138004
  • LOC100138908
  • LOC100296421
  • LOC100300896
  • LOC515333
  • MRP1
  • NAT1
  • STP
  • SULT1A1
  • SULT1E1
  • SULT2A1
  • UGT2B10
Bos taurus (cattle)
Glutathione conjugation
  • AKR1A1
  • ESD
  • GSTA1
  • GSTA2
  • GSTA4
  • GSTA5
  • GSTK1
  • GSTM1
  • GSTM3
  • GSTM4
  • GSTO2
  • GSTP1
  • GSTT1
  • HPGDS
  • LOC100295687
  • MGST1
  • MGST2
  • MGST3
Bos taurus (cattle)
Antagonism of Activin by Follistatin
  • FST
  • INHBA
  • INHBB
Bos taurus (cattle)
Glycoprotein hormones
  • CGA
  • FSHB
  • INHA
  • INHBA
  • INHBB
  • INHBC
  • INHBE
  • LHB
  • TSHB
Bos taurus (cattle)
Signaling by Activin
  • ACTRII
  • ACVR1B
  • ACVR1C
  • ACVR2
  • ACVR2A
  • ACVR2B
  • ERK2
  • INHA
  • INHBA
  • INHBB
  • MAPK1
  • MAPK3
  • PRKM1
  • SMAD2
  • SMAD3
  • SMAD4
  • TGFBR3
Bos taurus (cattle)
Asparagine N-linked glycosylation
  • ASGR1
  • ASGR2
  • B4GALNT2
  • UMOD
Bos taurus (cattle)
Glyoxylate metabolism and glycine degradation
  • AGXT
  • AGXT2
  • ALDH4A1
  • DAO
  • DHDPSL
  • GNMT
  • GOT2
  • GRHPR
  • HAO1
  • HOGA1
Bos taurus (cattle)
Crosslinking of collagen fibrils
  • BMP1
  • LOX
  • LOXL1
  • LOXL2
  • LOXL3
  • LOXL4
  • PCOLCE
  • PXDN
  • TLL1
  • TLL2
Bos taurus (cattle)
RHOF GTPase cycle
  • ACTB
  • ACTG
  • ACTG1
  • ACTN1
  • ADD3
  • AKAP12
  • ARHGAP1
  • ARHGAP12
  • ARHGAP32
  • ARHGAP39
  • ARHGAP5
  • BAIAP2L1
  • BAIAP2L2
  • BASP1
  • CAV1
  • DEPDC1B
  • DIAPH1
  • DIAPH2
  • DIAPH3
  • ESYT1
  • FAM169A
  • FAM62A
  • FARP1
  • LMNB1
  • MCAM
  • MTMR1
  • MYO9B
  • NAP22
  • PIK3R1
  • PIK3R2
  • RHOF
  • SENP1
  • SLC4A7
  • SNAP23
  • SRGAP2
  • STEAP3
  • SYDE1
  • TOR1AIP1
  • VANGL1
Bos taurus (cattle)
Other interleukin signaling
  • CSF1
  • CSF1R
  • CSF3
  • CSF3R
  • GCSF
  • IFNLR1
  • IL10RB
  • IL34
  • JAK1
  • PRTN3
  • PTPRZ1
  • SDC1
  • SNAP25
  • STX1A
  • STX3
  • STX4
  • STXBP2
  • SYB2
  • TXLNA
  • TYK2
  • VAMP2
Bos taurus (cattle)
Lysosome Vesicle Biogenesis
  • AP1B1
  • AP1G1
  • AP1G2
  • AP1M1
  • AP1M2
  • AP1S1
  • AP1S2
  • AP1S3
  • AP4B1
  • AP4E1
  • AP4M1
  • AP4S1
  • APP
  • ARF1
  • ARRB1
  • BLOC1S1
  • CHMP2A
  • CLTA
  • CLTB
  • CLTC
  • CLTLB
  • CLVS1
  • CLVS2
  • CTSZ
  • DNASE2
  • GNS
  • HGS
  • M6PR
  • SH3GL2
  • SYB2
  • TXNDC5
  • VAMP2
  • VAMP8
Bos taurus (cattle)
Glycolysis
  • ADPGK
  • ALDOA
  • ALDOB
  • ALDOC
  • BPGM
  • ENO2
  • ENO3
  • ENO4
  • GAPD
  • GAPDH
  • GAPDHS
  • GCK
  • GNPDA1
  • GNPDA2
  • GPI
  • HK1
  • HK2
  • HK3
  • HKDC1
  • PFKL
  • PFKM
  • PFKP
  • PGAM1
  • PGAM2
  • PGK1
  • PGM2L1
  • PKLR
  • PKM
  • PKM2
  • TPI1
Bos taurus (cattle)
Beta-catenin phosphorylation cascade
  • AMER1
  • APC
  • AXIN1
  • CSNK1A1
  • CTNNB1
  • FRAT2
  • GSK3B
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5D
  • PPP2R5E
Bos taurus (cattle)
Degradation of beta-catenin by the destruction complex
  • AMER1
  • APC
  • AXIN1
  • CSNK1A1
  • CTNNB1
  • CUL1
  • GSK3B
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5D
  • PPP2R5E
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • ZRANB1
Bos taurus (cattle)
Ovarian tumor domain proteases
  • APC
  • ARHA
  • CARD15
  • CDC2
  • CDK1
  • CDKN1
  • ESR
  • ESR1
  • IKBKG
  • NEMO
  • NOD2
  • NR3A1
  • OTUB1
  • OTUB2
  • OTUD3
  • OTUD7A
  • OTUD7B
  • PTEN
  • RHO12
  • RHOA
  • RIPK1
  • RIPK2
  • RNF128
  • RPS27A
  • TNIP1
  • TNIP2
  • TNIP3
  • TP53
  • TRAF3
  • TRAF6
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UBE2D1
  • VCP
  • VCPIP1
  • YOD1
  • ZRANB1
Bos taurus (cattle)
Disassembly of the destruction complex and recruitment of AXIN to the membrane
  • AMER1
  • APC
  • AXIN1
  • CAV1
  • CSNK1A1
  • CTNNB1
  • DVL1
  • DVL2
  • DVL3
  • FRAT2
  • FZD1
  • FZD2
  • FZD5
  • GSK3B
  • LRP5
  • LRP6
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5D
  • PPP2R5E
  • WNT1
  • WNT3A
  • WNT8A
  • WNT8B
Bos taurus (cattle)
O-linked glycosylation of mucins
  • B3GNT2
  • B3GNT4
  • B3GNT5
  • B3GNT6
  • B3GNT8
  • B3GNT9
  • B3GNTL1
  • B4GALT5
  • B4GALT6
  • C1GALT1
  • C1GALT1C1
  • CHST4
  • GALNT1
  • GALNT10
  • GALNT11
  • GALNT12
  • GALNT13
  • GALNT14
  • GALNT15
  • GALNT16
  • GALNT17
  • GALNT18
  • GALNT2
  • GALNT3
  • GALNT5
  • GALNT6
  • GALNT7
  • GALNT8
  • GALNTL1
  • GALNTL5
  • GCNT1
  • GCNT3
  • GCNT4
  • LOC789503
  • MUC1
  • MUC15
  • MUC2
  • MUC20
Bos taurus (cattle)
Cargo concentration in the ER
  • AREG
  • CD59
  • CNIH
  • CNIH1
  • CTSC
  • CTSZ
  • F5
  • F8
  • FOLR3
  • GOSR2
  • GRIA1
  • LMAN1
  • LMAN1L
  • LMAN2
  • LMAN2L
  • MCFD2
  • MIA2
  • PI
  • PREB
  • RAB1B
  • SAR1B
  • SEC22B
  • SEC23A
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SERPINA1
  • STX5
  • TGFA
  • TMED10
  • TMP21
  • VIPL
Bos taurus (cattle)
N-Glycan antennae elongation
  • B4GALT1
  • B4GALT2
  • B4GALT4
  • B4GALT5
  • B4GALT6
  • GALT
  • GGTB2
  • MGAT4A
  • MGAT4B
  • MGAT4C
  • MGAT5
  • ST3GAL4
  • ST8SIA2
  • ST8SIA3
Bos taurus (cattle)
Sialic acid metabolism
  • CMAS
  • CTSA
  • GLB1
  • GNE
  • NANP
  • NANS
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • NPL
  • SIAT10
  • SLC17A5
  • SLC35A1
  • ST3GAL1
  • ST3GAL2
  • ST3GAL3
  • ST3GAL4
  • ST3GAL5
  • ST3GAL6
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC2
  • ST6GALNAC4
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA4
  • ST8SIA5
  • siat4B
Bos taurus (cattle)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024