GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 51 - 75 of 557 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Tandem of pore domain in a weak inwardly rectifying K+ channels (TWIK)
  • KCNK1
  • KCNK7
Bos taurus (cattle)
Tachykinin receptors bind tachykinins
  • NKA
  • NKNA
  • NKNB
  • TAC1
  • TAC2
  • TAC2R
  • TAC3
  • TACR1
  • TACR2
  • TACR3
Bos taurus (cattle)
TWIK-related alkaline pH activated K+ channel (TALK)
  • KCNK16
  • KCNK17
Bos taurus (cattle)
TRP channels
  • MCOLN1
  • MCOLN2
  • MCOLN3
  • TRP6
  • TRPA1
  • TRPC1
  • TRPC3
  • TRPC4
  • TRPC4AP
  • TRPC5
  • TRPC6
  • TRPC7
  • TRPM4
  • TRPM5
  • TRPM7
  • TRPM8
  • TRPV1
  • TRPV2
  • TRPV3
  • TRPV4
  • TRPV5
  • TRPV6
Bos taurus (cattle)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
  • ECSIT
  • MAP3K1
  • TRAF6
Bos taurus (cattle)
TRAF6 mediated NF-kB activation
  • AGER
  • APP
  • CAAF1
  • CHUK
  • HMG1
  • HMGB1
  • IKBKB
  • IKBKG
  • IKKA
  • NEMO
  • NFKB1
  • NFKB2
  • NFKBIA
  • NFKBIB
  • NKIRAS1
  • NKIRAS2
  • RELA
  • S100A12
  • S100B
  • bIkBa
Bos taurus (cattle)
TP53 Regulates Transcription of Death Receptors and Ligands
  • IGFBP3
  • TMEM219
Bos taurus (cattle)
TP53 Regulates Metabolic Genes
  • COII
  • COX1
  • COX11
  • COX14
  • COX16
  • COX18
  • COX19
  • COX2
  • COX20
  • COX3
  • COX4
  • COX4I1
  • COX5A
  • COX6A1
  • COX6C
  • COX7A2L
  • COX7B
  • COX7C
  • COX7CP1
  • COXII
  • CYC
  • CYCS
  • DDIT4
  • G6PD
  • GBL
  • GLS
  • GLS2
  • GPI
  • GSR
  • LAMTOR1
  • LAMTOR2
  • LAMTOR3
  • LAMTOR4
  • LAMTOR5
  • LOC100296227
  • LOC783202
  • LRPPRC
  • LST8
  • MLST8
  • MT-CO2
  • MTCO2
  • MTOR
  • NDUFA4
  • PRDX1
  • PRDX2
  • PRDX5
  • PRKAA1
  • PRKAA2
  • PRKAB1
  • PRKAB2
  • PRKAG1
  • PRKAG2
  • PRKAG3
  • RHEB
  • RPTOR
  • RRAGA
  • RRAGB
  • RRAGC
  • RRAGD
  • SCO1
  • SCO2
  • SCOD1
  • SESN1
  • SESN2
  • SESN3
  • SFN
  • SLC38A9
  • SURF1
  • TACO1
  • TIGAR
  • TSC1
  • TXN
  • TXNRD1
  • YWHAB
  • YWHAE
  • YWHAG
  • YWHAH
  • YWHAQ
  • YWHAZ
Bos taurus (cattle)
TNFs bind their physiological receptors
  • APRIL
  • CD27
  • CD70
  • EDA
  • EDAR
  • EDARADD
  • LOC768081
  • LTA
  • TNFB
  • TNFRSF11B
  • TNFRSF13B
  • TNFRSF17
  • TNFRSF1A
  • TNFRSF1B
  • TNFRSF25
  • TNFRSF4
  • TNFRSF6B
  • TNFRSF8
  • TNFRSF9
  • TNFSF1
  • TNFSF11
  • TNFSF13
  • TNFSF13B
  • TNFSF14
  • TNFSF15
  • TNFSF18
  • TNFSF4
  • TNFSF8
  • TNFSF9
  • TNLG1B
  • TNLG1D
  • TNLG7A
  • TNLG8A
Bos taurus (cattle)
TNFR2 non-canonical NF-kB pathway
  • BIRC2
  • BIRC3
  • CD40
  • CD40LG
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • NCR3
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • SUG1
  • TNF
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFRSF1B
  • TNFRSF5
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TNFSF14
  • TNLG1D
  • TNLG7A
  • TRAF2
  • TRAF3
  • TRAP2
Bos taurus (cattle)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
  • BIRC2
  • BIRC3
  • CD40
  • CD40LG
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • NCR3
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFRSF5
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TNFSF14
  • TNLG1D
  • TNLG7A
  • TRAF2
  • TRAF3
Bos taurus (cattle)
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
  • ARHA
  • ARHGEF18
  • CGN
  • F11R
  • JAM1
  • PARD3
  • PARD6A
  • PRKCZ
  • RHO12
  • RHOA
  • RPS27A
  • SMURF1
  • TGFB1
  • TGFBR1
  • TGFBR2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
TGF-beta receptor signaling activates SMADs
  • CBL
  • FKBP1
  • FKBP1A
  • FURIN
  • ITGAV
  • ITGB1
  • ITGB3
  • ITGB5
  • ITGB6
  • ITGB8
  • LTBP1
  • LTBP2
  • LTBP3
  • LTBP4
  • NEDD8
  • SMAD2
  • SMAD3
  • SMAD4
  • TGFB1
  • TGFB2
  • TGFB3
  • TGFBR1
  • TGFBR2
  • TGFBR3
  • UBC12
  • UBE2M
  • ZFYVE9
Bos taurus (cattle)
TFAP2 (AP-2) family regulates transcription of growth factors and their receptors
  • ATAD2
  • CGA
  • ESR
  • ESR1
  • LHB
  • NR3A1
Bos taurus (cattle)
TFAP2 (AP-2) family regulates transcription of cell cycle factors
  • KDM5B
  • MYC
  • TFAP2C
Bos taurus (cattle)
TCF dependent signaling in response to WNT
  • AXIN1
  • AXIN2
  • CTNNB1
  • RNF146B
  • RPS27A
  • TNKS
  • TNKS2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • USP34
  • WNT1
  • WNT3
  • WNT3A
  • WNT5A
Bos taurus (cattle)
TAK1-dependent IKK and NF-kappa-B activation
  • AGER
  • APP
  • CAAF1
  • CHUK
  • HMG1
  • HMGB1
  • IKBKB
  • IKBKG
  • IKKA
  • NEMO
  • NFKB1
  • NFKB2
  • NFKBIA
  • NFKBIB
  • NKIRAS1
  • NKIRAS2
  • RELA
  • S100A12
  • S100B
  • bIkBa
Bos taurus (cattle)
Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
  • CD26
  • DPP4
  • GIP
  • GPR119
Bos taurus (cattle)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • CD26
  • DPP4
  • FFAR4
  • GCG
  • GNAT3
  • GNB1
  • GNB3
  • GNG13
  • GPR119
  • GPR120
  • GRP
  • LEP
  • ob
Bos taurus (cattle)
Synthesis, secretion, and deacylation of Ghrelin
  • BCHE
  • GCG
  • GH1
  • GHRL
  • IGF1
  • INS
  • LEP
  • MBOAT4
  • PCSK1
  • PLA2G7
  • SEC11A
  • SEC11C
  • SEC11L1
  • SPC18
  • SPCS1
  • SPCS2
  • SPCS3
  • ob
Bos taurus (cattle)
Synthesis of very long-chain fatty acyl-CoAs
  • ACSF3
  • ACSL1
  • ACSL3
  • ACSL4
  • ACSL5
  • ACSL6
  • ELOVL2
  • ELOVL3
  • ELOVL5
  • ELOVL6
  • ELOVL7
  • GPSN2
  • HACD1
  • HACD2
  • HACD3
  • HACD4
  • HSD17B12
  • HSD17B3
  • LOC789567
  • MGC139109
  • PTPLAD1
  • SRD5A2L2
  • TECR
  • TECRL
Bos taurus (cattle)
Synthesis of glycosylphosphatidylinositol (GPI)
  • DPM2
  • GPI7
  • PIGA
  • PIGB
  • PIGC
  • PIGF
  • PIGG
  • PIGH
  • PIGL
  • PIGN
  • PIGP
  • PIGV
  • PIGW
  • PIGZ
Bos taurus (cattle)
Synthesis of Prostaglandins (PG) and Thromboxanes (TX)
  • AKR1C4
  • CBR1
  • CYP8
  • HPGDS
  • LOC506594
  • LOC538060
  • LOC782061
  • LOC782884
  • LOC785762
  • PTGDS
  • PTGES
  • PTGES2
  • PTGES3
  • PTGIS
  • PTGS1
  • PTGS2
  • TBXAS1
Bos taurus (cattle)
Synthesis of PC
  • ABHD3
  • CEPT1
  • CHAT
  • CHKA
  • CHKB
  • CHPT1
  • CK2A1
  • CK2N
  • CPT1
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • CTL2
  • CTL3
  • CTL4
  • LPCAT1
  • LPIN1
  • LPIN2
  • LPIN3
  • MFSD2
  • MFSD2A
  • PCTP
  • PCYT1A
  • PCYT1B
  • PEMT
  • PEMT2
  • PHOSPHO1
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • SLC44A5
  • STARD10
  • STARD2
  • STARD7
  • TPPT1
Bos taurus (cattle)
Synthesis of PA
  • ACP6
  • AGPAT1
  • AGPAT2
  • AGPAT3
  • AGPAT4
  • AGPAT5
  • AGPAT6
  • CPLA2
  • DDHD1
  • DDHD2
  • FAM73B
  • GNPAT
  • GPAM
  • GPAT2
  • GPAT3
  • GPAT4
  • GPD1
  • GPD1L
  • GPD2
  • LIPH
  • LOC516378
  • LOC613966
  • LPCAT1
  • LPCAT4
  • MIGA1
  • MIGA2
  • PLA2G12A
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2R1
  • PLD1
  • PLD2
  • PLD6
Bos taurus (cattle)

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Last updated: August 19, 2024