GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 226 - 250 of 268 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Synaptic adhesion-like molecules
  • DLG1
  • DLG3
  • DLG4
  • FLOT1
  • FLOT2
  • GRIA1
  • GRIA3
  • GRIA4
  • GRIN1
  • GRIN2A
  • GRIN2B
  • GRIN2C
  • GRIN2D
  • LRFN1
  • LRFN2
  • LRFN3
  • LRFN4
  • NMDAR1
  • PTPRD
  • PTPRF
  • RTN3
Canis familiaris (dog)
Synthesis of 5-eicosatetraenoic acids
  • ALOX5
  • ALOX5AP
  • LTC4S
  • PON1
  • PON2
  • PON3
Canis familiaris (dog)
Synthesis of IP3 and IP4 in the cytosol
  • CALM2
  • INPP5B
  • INPP5D
  • INPP5J
  • INPPL1
  • ITPK1
  • ITPKA
  • ITPKB
  • ITPKC
  • MMAC1
  • OCRL
  • PLCB1
  • PLCB2
  • PLCB3
  • PLCB4
  • PLCD1
  • PLCD3
  • PLCD4
  • PLCE1
  • PLCG1
  • PLCG2
  • PLCH1
  • PLCH2
  • PLCZ1
  • PLD4
  • PTEN
  • SHIP2
  • SYNJ1
Canis familiaris (dog)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • ABCC1
  • ALOX15
  • ALOX5
  • ALOX5AP
  • CYP4A11
  • CYP4A37
  • CYP4A39
  • CYP4B1
  • CYP4F22
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • LOC119863926
  • LTA4H
  • LTC4S
  • MRP1
Canis familiaris (dog)
Synthesis of Prostaglandins (PG) and Thromboxanes (TX)
  • CBR1
  • COX-2
  • COX1
  • CYP8B1
  • H-PGDS
  • HPGDS
  • PGES
  • PTGDS
  • PTGES
  • PTGES2
  • PTGIS
  • PTGS1
  • PTGS2
  • TBXAS1
Canis familiaris (dog)
Synthesis of bile acids and bile salts
  • CYP7A1
  • CYP7B1
  • NCOA1
  • NCOA2
  • NR1H4
  • OSBP
  • OSBPL1A
  • OSBPL2
  • OSBPL3
  • OSBPL6
  • OSBPL7
  • OSBPL9
  • RXRA
Canis familiaris (dog)
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
  • ACOT8
  • ACOX2
  • Abcb11e
  • BAAT
  • BSEP
  • CYP27A1
  • CYP7A1
  • CYP7B1
  • CYP8B1
  • HSD17B4
  • HSD3B7
  • LOC119874618
  • NCOA1
  • NCOA2
  • NR1H4
  • PTGIS
  • RXRA
  • SCP2
  • SLC27A2
  • SLC27A5
Canis familiaris (dog)
Synthesis, secretion, and deacylation of Ghrelin
  • BCHE
  • GCG
  • GH
  • GH1
  • GHRL
  • IGF1
  • IGFIA
  • INS
  • LEP
  • MBOAT4
  • MTLRP
  • PCSK1
  • PLA2G7
  • SEC11A
  • SEC11L1
  • SPC12
  • SPC18
  • SPC22
  • SPC25
  • SPCS1
  • SPCS2
  • SPCS3
Canis familiaris (dog)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • DPP4
  • FFAR1
  • FFAR4
  • GCG
  • GNAT3
  • GNB1
  • GNB3
  • GNG13
  • GPR119
  • GRP
  • LEP
Canis familiaris (dog)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
  • BIRC2
  • BIRC3
  • CD40
  • CD40L
  • CD40LG
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TNFSF14
  • TNFSF5
  • TNLG1C
  • TNLG1D
  • TNLG7A
  • TRAF2
  • TRAF3
Canis familiaris (dog)
TNF signaling
  • ADAM17
  • RIPK1
  • TNF
  • TNFA
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
Canis familiaris (dog)
TNFR1-induced NF-kappa-B signaling pathway
  • BIRC2
  • BIRC3
  • BIRC4
  • CHUK
  • CYLD
  • IKBKB
  • IKBKG
  • IRF9
  • MAP3K7
  • OPTN
  • OTUD1
  • OTUD7B
  • RACK1
  • RBCK1
  • RIPK1
  • SPATA2
  • TAB1
  • TAB2
  • TAB3
  • TNF
  • TNFA
  • TNFAIP3
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
  • USP2
  • USP21
  • USP4
  • XIAP
Canis familiaris (dog)
TNFR1-induced proapoptotic signaling
  • BIRC2
  • BIRC3
  • BIRC4
  • CYLD
  • IKBKE
  • IRF9
  • MIB2
  • RBCK1
  • RIPK1
  • SPATA2
  • TBK1
  • TNF
  • TNFA
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
  • XIAP
Canis familiaris (dog)
TNFR1-mediated ceramide production
  • NSMAF
  • RACK1
  • SMPD2
  • SMPD3
  • TNF
  • TNFA
  • TNFRSF1A
  • TNFSF2
Canis familiaris (dog)
TNFR2 non-canonical NF-kB pathway
  • BIRC2
  • BIRC3
  • CD40
  • CD40L
  • CD40LG
  • LOC100686569
  • LOC100687259
  • LOC610717
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC1
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMD1
  • PSMD10
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • TNF
  • TNFA
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFRSF1B
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TNFSF14
  • TNFSF2
  • TNFSF5
  • TNLG1C
  • TNLG1D
  • TNLG7A
  • TRAF2
  • TRAF3
Canis familiaris (dog)
TNFs bind their physiological receptors
  • CD27
  • CD70
  • EDA
  • EDAR
  • EDARADD
  • LTA
  • MIIP
  • TNFB
  • TNFRSF11B
  • TNFRSF13B
  • TNFRSF14
  • TNFRSF17
  • TNFRSF18
  • TNFRSF1A
  • TNFRSF1B
  • TNFRSF4
  • TNFRSF6B
  • TNFRSF9
  • TNFSF1
  • TNFSF11
  • TNFSF13
  • TNFSF13B
  • TNFSF14
  • TNFSF18
  • TNFSF4
  • TNFSF8
  • TNLG1D
  • TNLG2A
  • TNLG2B
  • TNLG3A
  • TNLG7A
Canis familiaris (dog)
TRP channels
  • MCOLN1
  • MCOLN2
  • MCOLN3
  • TRPA1
  • TRPC1
  • TRPC3
  • TRPC4
  • TRPC4AP
  • TRPC5
  • TRPC6
  • TRPC7
  • TRPM1
  • TRPM2
  • TRPM3
  • TRPM4
  • TRPM5
  • TRPM6
  • TRPM7
  • TRPM8
  • TRPV1
  • TRPV2
  • TRPV3
  • TRPV4
  • TRPV5
  • TRPV6
Canis familiaris (dog)
TWIK-related alkaline pH activated K+ channel (TALK)
  • KCNK16
  • KCNK17
Canis familiaris (dog)
Tachykinin receptors bind tachykinins
  • LOC116183080
  • TAC1
  • TACR1
  • TACR2
  • TACR3
Canis familiaris (dog)
Terminal pathway of complement
  • C5
  • C6
  • C7
  • C8A
  • C8B
  • C8G
  • C9
  • CLU
Canis familiaris (dog)
The NLRP3 inflammasome
  • HSP90AB1
  • MEFV
  • NLRP3
  • P2RX7
  • PANX
  • PANX1
  • PSTPIP1
  • PYCARD
  • SUGT1
  • TXN
  • TXNIP
Canis familiaris (dog)
The activation of arylsulfatases
  • ARSA
  • ARSB
  • ARSF
  • ARSG
  • ARSH
  • ARSI
  • ARSJ
  • ARSK
  • ARSL
  • STS
  • SUMF1
  • SUMF2
  • arsb
Canis familiaris (dog)
The canonical retinoid cycle in rods (twilight vision)
  • ABCA4
  • CYP4V2
  • DHRS9
  • HSD17B6
  • LRAT
  • MYO7A
  • RBP1
  • RBP3
  • RBP4
  • RDH10
  • RDH12
  • RDH16
  • RDH5
  • RHO
  • RLBP1
  • RPE65
  • SDR9C7
  • STRA6
  • TTR
Canis familiaris (dog)
The retinoid cycle in cones (daylight vision)
  • AWAT2
  • DHRS3
  • OPN1LW
  • OPN1SW
  • RBP3
  • RCP
  • RLBP1
Canis familiaris (dog)
Thyroxine biosynthesis
  • CGA
  • DUOX1
  • DUOX2
  • GPA1
  • IYD
  • SLC5A5
  • THOX1
  • TPO
  • TSHB
Canis familiaris (dog)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024