GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **301 - 325** of **597** in total

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Pathway Name	Protein Name ▲	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Ciprofloxacin ADME	Beta-alanine transporter Carcinine transporter FI01439p FI03229p FI05810p FI18650p1 FI24011p1 GH09241p GH28654p IP21853p IP21962p LP02775p LP04053p MIP13952p Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Organic anion transporting polypeptide 30B, isoform A Organic cation transporter protein Organic cation transporter-like protein Protein brown RE69557p RH23644p Solute carrier family 22 member 3 Uncharacterized protein, isoform B Uncharacterized protein, isoform B Uncharacterized protein	A0A0B4KFK6 D2NUL5 P12428 Q0KI14 Q7K3M6 Q95R48 Q961J5 Q961R9 Q9VCA0 Q9VCA2 Q9VD40 Q9VDR9 Q9VDS0 Q9VDS2 Q9VDV5 Q9VDV6 Q9VDV7 Q9VDV8 Q9VDV9 Q9VDW0 Q9VFG0 Q9VFG1 Q9VFG2 Q9VIK2 Q9VLB3 Q9VNW8 Q9VNX2 Q9VRQ8 Q9VRR0 Q9VRT4	Balat BcDNA:GH19411 CG11764 CG12588 CG14654 CG14856-RA CG18633 CG18655 CG31121-RA CG31530 CG31530-RA CG4462-RA CG6231-RD CG6596 CG6600 CG7342-RA CG7458-RA CG8654-RA CG9767 CT19169 CarT DmSLC22A Dmel\CG10486 Dmel\CG14855 Dmel\CG14856 Dmel\CG14857 Dmel\CG16727 Dmel\CG17751 Dmel\CG17752 Dmel\CG31121 Dmel\CG3811 Dmel\CG42269 Dmel\CG44098 Dmel\CG4459 Dmel\CG4462 Dmel\CG4465 Dmel\CG4630 Dmel\CG5592 Dmel\CG6126 Dmel\CG6231 Dmel\CG6356 Dmel\CG7084 Dmel\CG7333 Dmel\CG7342 Dmel\CG7442 Dmel\CG7458 Dmel\CG8654 Oatp30B Orct Orct2 SLC22A Slc22a15 bw oatp 30B oatp30B	Drosophila melanogaster (fruit fly)
Na+/Cl- dependent neurotransmitter transporters	Beta-alanine transporter Carcinine transporter FI01439p FI05810p FI17140p1 FI18149p1 FI18650p1 FI24011p1 GH01326p GH09241p GH10249p GH28654p IP11961p IP21853p IP21962p LP02775p LP04053p MIP13952p Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Organic cation transporter protein Organic cation transporter-like protein Portabella RE69557p RH23644p Sodium-dependent dopamine transporter Sodium-dependent nutrient amino acid transporter 1 Solute carrier family 22 member 3 Transporter Transporter Transporter Transporter Transporter Transporter Transporter Transporter Transporter Transporter Uncharacterized protein, isoform B Uncharacterized protein, isoform B Uncharacterized protein, isoform B Uncharacterized protein	A0A0B4K7V4 A0A0B4KFK6 A1Z8V9 A1ZBC7 B7Z122 D2NUL5 Q7K330 Q7K3M6 Q7K4Y6 Q7KTJ8 Q8IH57 Q95R48 Q95TF4 Q961J5 Q961R9 Q9I7N9 Q9V4E7 Q9VCA0 Q9VCA2 Q9VCJ5 Q9VD40 Q9VDR9 Q9VDS0 Q9VDS2 Q9VDV5 Q9VDV6 Q9VDV7 Q9VDV8 Q9VDV9 Q9VDW0 Q9VFG0 Q9VFG1 Q9VFG2 Q9VIK2 Q9VJR4 Q9VLY3 Q9VLY4 Q9VLY5 Q9VNW8 Q9VNX2 Q9VRQ8 Q9VRR0 Q9VRT4 Q9VSV2 Q9W1J0 Q9W4C5	BG:DS03431.1 Balat CG12588 CG13795-RB CG13796 CG13796-PA CG13796-RA CG14654 CG14856-RA CG1732a CG18590 CG31530 CG31530-RA CG31904-PD CG42510 CG43006 CG4462-RA CG4476-RB CG5226 CG6139 CG6231-RD CG6596 CG6600 CG7342-RA CG7458-RA CG8654-RA CG8850-RB CG9767 CT19169 CT33284 CT42497 CarT DAT DS03431.1 DVMAT DVMAT-A DVMAT-B DmGAT DmNAT2 DmNAT3 DmNAT4 DmNAT5 DmNAT6 DmSLC22A Dmel\CG10251 Dmel\CG10486 Dmel\CG10804 Dmel\CG13793 Dmel\CG13794 Dmel\CG13795 Dmel\CG13796 Dmel\CG14855 Dmel\CG14856 Dmel\CG14857 Dmel\CG15088 Dmel\CG15279 Dmel\CG16727 Dmel\CG1698 Dmel\CG1732 Dmel\CG17751 Dmel\CG17752 Dmel\CG31904 Dmel\CG33296 Dmel\CG33528 Dmel\CG42269 Dmel\CG43066 Dmel\CG44098 Dmel\CG4459 Dmel\CG4462 Dmel\CG4465 Dmel\CG4476 Dmel\CG4630 Dmel\CG5549 Dmel\CG5592 Dmel\CG6126 Dmel\CG6231 Dmel\CG6356 Dmel\CG7084 Dmel\CG7333 Dmel\CG7342 Dmel\CG7442 Dmel\CG7458 Dmel\CG8654 Dmel\CG8850 GAT Gat GlyT List NAAT1 Orct Orct2 SLC22A Slc22a15 VMAT Vmat Vmt anon-WO0149848.1 anon-WO0149848.11 anon-WO0149848.5 anon-WO0149848.7 anon-WO0149848.9 dGAT dGlyT dVMAT fmn gat l(2)SH0459 l(2)SH2 0459 prt vmat	Drosophila melanogaster (fruit fly)
Organic cation transport	Beta-alanine transporter Carcinine transporter FI01439p FI05810p FI18650p1 FI24011p1 GH09241p GH28654p IP21853p IP21962p LP02775p LP04053p MIP13952p Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Organic cation transporter protein Organic cation transporter-like protein RE69557p RH23644p Segmentation protein Runt Solute carrier family 22 member 3 Uncharacterized protein, isoform B Uncharacterized protein, isoform B Uncharacterized protein	A0A0B4KFK6 D2NUL5 P22814 Q7K3M6 Q95R48 Q961J5 Q961R9 Q9VCA0 Q9VCA2 Q9VD40 Q9VDR9 Q9VDS0 Q9VDS2 Q9VDV5 Q9VDV6 Q9VDV7 Q9VDV8 Q9VDV9 Q9VDW0 Q9VFG0 Q9VFG1 Q9VFG2 Q9VIK2 Q9VNW8 Q9VNX2 Q9VRQ8 Q9VRR0 Q9VRT4	Balat CG12588 CG14654 CG14856-RA CG31530 CG31530-RA CG4462-RA CG6231-RD CG6596 CG6600 CG7342-RA CG7458-RA CG8654-RA CG9767 CT19169 CarT DmSLC22A Dmel\CG10486 Dmel\CG14855 Dmel\CG14856 Dmel\CG14857 Dmel\CG16727 Dmel\CG17751 Dmel\CG17752 Dmel\CG42269 Dmel\CG44098 Dmel\CG4459 Dmel\CG4462 Dmel\CG4465 Dmel\CG4630 Dmel\CG5592 Dmel\CG6126 Dmel\CG6231 Dmel\CG6356 Dmel\CG7084 Dmel\CG7333 Dmel\CG7342 Dmel\CG7442 Dmel\CG7458 Dmel\CG8654 Orct Orct2 SLC22A Slc22a15 run	Drosophila melanogaster (fruit fly)
Abacavir transmembrane transport	Beta-alanine transporter Carcinine transporter FI01439p FI05810p FI18650p1 FI24011p1 GH09241p GH28654p IP21853p IP21962p LP02775p LP04053p MIP13952p Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Organic cation transporter protein Organic cation transporter-like protein RE69557p RH23644p Solute carrier family 22 member 3 Uncharacterized protein, isoform B Uncharacterized protein, isoform B Uncharacterized protein	A0A0B4KFK6 D2NUL5 Q7K3M6 Q95R48 Q961J5 Q961R9 Q9VCA0 Q9VCA2 Q9VD40 Q9VDR9 Q9VDS0 Q9VDS2 Q9VDV5 Q9VDV6 Q9VDV7 Q9VDV8 Q9VDV9 Q9VDW0 Q9VFG0 Q9VFG1 Q9VFG2 Q9VIK2 Q9VNW8 Q9VNX2 Q9VRQ8 Q9VRR0 Q9VRT4	Balat CG12588 CG14654 CG14856-RA CG31530 CG31530-RA CG4462-RA CG6231-RD CG6596 CG6600 CG7342-RA CG7458-RA CG8654-RA CG9767 CT19169 CarT DmSLC22A Dmel\CG10486 Dmel\CG14855 Dmel\CG14856 Dmel\CG14857 Dmel\CG16727 Dmel\CG17751 Dmel\CG17752 Dmel\CG42269 Dmel\CG44098 Dmel\CG4459 Dmel\CG4462 Dmel\CG4465 Dmel\CG4630 Dmel\CG5592 Dmel\CG6126 Dmel\CG6231 Dmel\CG6356 Dmel\CG7084 Dmel\CG7333 Dmel\CG7342 Dmel\CG7442 Dmel\CG7458 Dmel\CG8654 Orct Orct2 SLC22A Slc22a15	Drosophila melanogaster (fruit fly)
Organic anion transport	Beta-alanine transporter Carcinine transporter FI01439p FI05810p FI18650p1 FI24011p1 GH09241p GH28654p IP21853p IP21962p LP02775p LP04053p MIP13952p Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Major facilitator superfamily (MFS) profile domain-containing protein Organic cation transporter protein Organic cation transporter-like protein RE69557p RH23644p Solute carrier family 22 member 3 Uncharacterized protein, isoform B Uncharacterized protein, isoform B Uncharacterized protein	A0A0B4KFK6 D2NUL5 Q7K3M6 Q95R48 Q961J5 Q961R9 Q9VCA0 Q9VCA2 Q9VD40 Q9VDR9 Q9VDS0 Q9VDS2 Q9VDV5 Q9VDV6 Q9VDV7 Q9VDV8 Q9VDV9 Q9VDW0 Q9VFG0 Q9VFG1 Q9VFG2 Q9VIK2 Q9VNW8 Q9VNX2 Q9VRQ8 Q9VRR0 Q9VRT4	Balat CG12588 CG14654 CG14856-RA CG31530 CG31530-RA CG4462-RA CG6231-RD CG6596 CG6600 CG7342-RA CG7458-RA CG8654-RA CG9767 CT19169 CarT DmSLC22A Dmel\CG10486 Dmel\CG14855 Dmel\CG14856 Dmel\CG14857 Dmel\CG16727 Dmel\CG17751 Dmel\CG17752 Dmel\CG42269 Dmel\CG44098 Dmel\CG4459 Dmel\CG4462 Dmel\CG4465 Dmel\CG4630 Dmel\CG5592 Dmel\CG6126 Dmel\CG6231 Dmel\CG6356 Dmel\CG7084 Dmel\CG7333 Dmel\CG7342 Dmel\CG7442 Dmel\CG7458 Dmel\CG8654 Orct Orct2 SLC22A Slc22a15	Drosophila melanogaster (fruit fly)
Hyaluronan uptake and degradation	Beta-glucuronidase Probable beta-hexosaminidase fdl beta-N-acetylhexosaminidase beta-N-acetylhexosaminidase	A1ZBG9 Q0E8H9 Q8WSF3 Q9W3C4	CG15117-RB DmHex1 DmHex2 Dmel\CG1318 Dmel\CG15117 Dmel\CG1787 HEX 1 HEX 2 HEX1 HEX2 HEXO1 HEXO2 Hexo1 Hexo2 fdl	Drosophila melanogaster (fruit fly)	G35674CY
Lactose synthesis	Beta1,4-N-acetylgalactosaminyltransferase A Beta1,4-N-acetylgalactosaminyltransferase B GEO02684p1 GEO08277p1 GEO12014p1 Glucose transporter type 1 IP06881p Lysozyme B Lysozyme D Lysozyme E Lysozyme P Lysozyme S Lysozyme X Uncharacterized protein, isoform A lysozyme	A1Z9D5 A1ZAB8 A1ZBX6 A1ZBX7 P29615 P37159 P37160 P37161 P83972 Q08694 Q7KN92 Q8IRI6 Q9VAQ8 Q9VSA5 Q9W4C2	BcDNA:GH13356 BcDNA:RH17440 CG30062-RB CG7798-RA DmGalT Dmel\CG11159 Dmel\CG14517 Dmel\CG16756 Dmel\CG16799 Dmel\CG30062 Dmel\CG7798 Dmel\CG8492 Dmel\CG8536 Glut1 LysB LysD LysE LysP LysS LysX anon-WO0118547.128 b4GalNAcTA beta-4GalNAcTA beta-4GalNAcTB beta-4GalTA beta-4GalTB beta4Gal-NAcTA beta4GalNAcT1 beta4GalNAcTA beta4GalNAcTB beta4GalNacTA beta4GalNacTB beta4GalTA beta4GalTB betaGalNAcTB dbeta4GalTA dbeta4GalTB	Drosophila melanogaster (fruit fly)	G58161NS G74621DY
HS-GAG biosynthesis	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase Dally-like, isoform A Division abnormally delayed protein Dpr-interacting protein alpha, isoform A Dpr-interacting protein beta, isoform C Dpr-interacting protein delta, isoform D Dpr-interacting protein epsilon Dpr-interacting protein eta, isoform B Dpr-interacting protein gamma Dpr-interacting protein kappa, isoform A Dpr-interacting protein lambda Dpr-interacting protein theta Dpr-interacting protein zeta, isoform A Exostosin-1 Exostosin-2 Factor of interpulse interval GH20068p Heparan sulfate 3-O sulfotransferase-B, isoform A Heparan-sulfate 6-O-sulfotransferase Heparin sulfate O-sulfotransferase Lachesin Neural cell adhesion molecule 2 SP2353, isoform A Syndecan UDP-sugar transporter UST74c Uncharacterized protein, isoform D	A1ZA87 A4IJ70 A8JNC7 B7Z153 M9NDT2 P25722 P49415 Q24114 Q24372 Q59E14 Q7PLL7 Q8IP70 Q8MRE7 Q95YI5 Q9V3L1 Q9V730 Q9VAR6 Q9VDR6 Q9VLF0 Q9VMN6 Q9VMN9 Q9VR25 Q9VUG1 Q9VWJ7 Q9W4R3 Q9Y169	14010 14521 15630 31646 31708 31814 32791 33543 34391 40378 42343 42368 BG:DS08249.1 BP1062 BcDNA:GH12319 BcDNA:RE23430 CG11683 CG12564 CG12565 CG13019 CG13020 CG13103 CG13104 CG13105 CG13981 CG14008 CG14009 CG14583 CG15074 CG15075 CG15076 CG15214 CG15354 CG15355 CG17188 CG17703 CG18533 CG30123 CG30124 CG31646-RA CG31708-RA CG31970 CG33295 CG34019 CG40378 CG40378-RB CG42644 CG43676 CG4814 CG5031 CG9508 CG9511 CT15465 CT16138 CT18665 CT32337 CT32338 CT33566 CT33567 CT34248 CT34319 CT35147 CT35293 CT35363 CT35364 CT35785 D-gpcB DEXT1 DIP-alpha DIP-beta DIP-delta DIP-epsilon DIP-eta DIP-gamma DIP-kappa DIP-lambda DIP-theta DIP-zeta DLP Dally-like Dlp Dly DmHs6st Dmel\CG14010 Dmel\CG14521 Dmel\CG15312 Dmel\CG15630 Dmel\CG31646 Dmel\CG31708 Dmel\CG31814 Dmel\CG32146 Dmel\CG32791 Dmel\CG33147 Dmel\CG33543 Dmel\CG34391 Dmel\CG42343 Dmel\CG42368 Dmel\CG4451 Dmel\CG45781 Dmel\CG7890 Dmel\CG8403 Ext2 Fipi HS3ST HS6ST Hs2st Hs3st-A Hs3st-B Hs6st Lac SP2353 Sdc Syd UST74C anon-WO0140519.196 dHS3OSTA dHS3OSTB dHS6ST dHs3st-B dally dlp dly fipi frc hs6st lincRNA.S3111 pp-CT34319 pp-CT34320 pp-CT34321 sfl sotv ttv	Drosophila melanogaster (fruit fly)
Formation of WDR5-containing histone-modifying complexes	Biorientation defective 1, isoform E CXXC-type zinc finger protein 1 GH01794p HL01030p Histone acetyltransferase MOF Histone-lysine N-methyltransferase SETD1 Histone-lysine N-methyltransferase trithorax Histone-lysine N-methyltransferase trr Host cell factor JIL-1 anchoring and stabilizing protein, isoform A KAT8 regulatory NSL complex subunit 2 LD05057p Menin Non-specific lethal 1, isoform M Protein MBD-R2 Protein will die slowly Reduction in Cnn dots 1, isoform E Retinoblastoma-binding protein 5 homolog Set1/Ash2 histone methyltransferase complex subunit ASH2 WD repeat-containing protein 82 protein O-GlcNAc transferase	A0A0B4KF25 A0A0B4KHZ9 A0A0B4LHU7 E2QD16 O02193 P20659 Q5LJZ2 Q7KJA9 Q8IRW8 Q94545 Q9V3J8 Q9V4C8 Q9VAA9 Q9VGA4 Q9VLN1 Q9VM47 Q9VPH8 Q9VUX9 Q9VZJ3 Q9W1H0 Q9W352	BOD1 BcDNA:GH04245 Bod1 CG10392-RC CG33266 Cfp1 Cmi Dgt1 DmOGT Dmel\CG10392 Dmel\CG1135 Dmel\CG13778 Dmel\CG18041 Dmel\CG4699 Dmel\CG5241 Dmel\CG5514 Dmel\CG5591 Dmel\CG7946 Dmel\CG8233 E(nos) Hcf JASPer Jasper KMT2A KMT2C LPT Lpt MBD-R2 MCRS1 MCRS2 MEN1 Menin Menin1 Mnn Mnn1 NSL1 NSL2 NSL3 Nsl1 Nsl3 OGT Ogt P1201 Rbbp5 Rcd1 Rcd5 SXC Set1 Sxc Tasp1 Taspase1 Wdr82 anon-WO0118547.172 ash2 cg5591 cg8233 cmi dMCRS1 dMCRS2 dO-GnT dTasp dgt1 l(1)3Ad l(1)zw8 l(2)02637 l(2)NC130 l(3)06536 l(3)72Dl l(3)S009413 l(3)r0166 l(3)rG166 lpt menin mnn1 mof nsl1 ogt p78 sxc sxc/Ogt trr trx wah wds	Drosophila melanogaster (fruit fly)
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd	Drosophila melanogaster (fruit fly)
RNA Polymerase II Transcription Initiation And Promoter Clearance	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd	Drosophila melanogaster (fruit fly)
RNA Polymerase II Transcription Initiation	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd	Drosophila melanogaster (fruit fly)
RNA Polymerase II Promoter Escape	Bip2 CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO07843p1 GEO11084p1 GH07456p GH11150p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD16387p RNA-binding protein cabeza RPB5 homolog TATA-box-binding protein TBP-related factor Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 10b Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 12 Transcription initiation factor TFIID subunit 1 Transcription initiation factor TFIID subunit 2 Transcription initiation factor TFIID subunit 4 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 5 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 9	B7Z018 O76513 O96880 O96881 O97183 P04052 P08266 P20227 P29052 P36958 P41900 P47825 P49846 P49847 P49905 P49906 P51123 P52654 P52656 Q02870 Q05913 Q24216 Q24320 Q24325 Q27272 Q27294 Q27896 Q6IGE3 Q7JZF5 Q7KPG8 Q7KVP9 Q960E8 Q9V4D4 Q9VC49 Q9VCN9 Q9VEA5 Q9VFB5 Q9VHY5 Q9VIP1 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VT91 Q9VUR1 Q9XZT7	142767_at 152117_at 154538_at 38B.15 AT-1 BG:DS00941.10 BIP2 BTF1 Bip2 CCNH CD 7 CDK7 CG14037 CG6572 Can Cdk7 CycH D-rpII33 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmTAF3 DmXPD Dmcdk7 Dmel\CG10415 Dmel\CG10756 Dmel\CG11115 Dmel\CG11246 Dmel\CG11979 Dmel\CG1276 Dmel\CG2009 Dmel\CG31155 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG4448 Dmel\CG5041 Dmel\CG6577 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG9433 Dmp34 Dmp52 Dmp8 ERCC2 ERCC3 E[[S]] MAT1 Mat1 Mo15 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SARFH SSL1 Ssl1 TAF TAF110 TAF13 TAF150 TAF155 TAF18 TAF250 TAF3 TAF30-ALPHA TAF30-BETA TAF40 TAF5 TAF55 TAF5L TAF80 TAFII155 TAFII40 TAF[[II]] TAF[[II]]155 TAF[[II]]18 TFB2 TFB4 TFB5 TFB5 (uORF) TFIID TFIIE TFIIE-L TFIIEalpha TFIIEbeta TFIIF30 TFIIbeta TTDA Taf1 Taf10b Taf11 Taf12 Taf13 Taf16 Taf18 Taf2 Taf3 Taf4 Taf5 Taf5L Taf6 Taf60 Taf7 Taf9 Tbp TfIIA-L TfIIA-S TfIIB TfIIE TfIIE-alpha TfIIE-beta TfIIEa TfIIEalpha TfIIEbeta TfIIFalpha TfIIFbeta Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB Trf WDA WFA WSB-1 WSB1 Wda XPD XPD/ERCC2 Xpd anon-84Ec anon-WO0118547.648 bip-II bip2 br17 can caz cdk-7 cdk7 dBIP2 dCdk7 dRpb7 dTAF5L dTAFII3 dTAF[[II]]155 dTAF[[II]]18 dTAF[[II]]80 dTFIIE-L dTFIIE-S dTFIIEL dTFIIES dWda dmTAF3 dmTAF5b e(y)1 hay i163 i31 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pol II polII rpII33 rpb3 ssl1 taf13 taf3 taf5L uORF wda xpd	Drosophila melanogaster (fruit fly)
Detoxification of Reactive Oxygen Species	Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] Catalase Cytochrome c-2 Extracellular superoxide dismutase [Cu-Zn] GEO01508p1 NADPH oxidase, isoform C Peroxiredoxin 2 Peroxiredoxin-5 Superoxide dismutase [Cu-Zn] Superoxide dismutase [Mn], mitochondrial Thioredoxin reductase 1, mitochondrial Thioredoxin-2 Thioredoxin-dependent peroxide reductase, mitochondrial thioredoxin-dependent peroxiredoxin	A8DWJ8 E1JH26 P17336 P84029 P91938 Q00637 Q4V6M1 Q7JR71 Q960M4 Q9V3P0 Q9V429 Q9VEJ0 Q9VUM4 Q9W022	6888 8993 Ap[[4]]A BcDNA:AT16346 CCD CCS CG 32920 CG 7217 CG-17753 CG15924 CG3292 CG32920 CG3896 CG7215-RA CYTC2 Cat Ccs Cyt-c-p DC4 DPx-4783 Datp DmCCS DmNox Dmel\CG17753 Dmel\CG31713 Dmel\CG34399 Dmel\CG6888 Dmel\CG7217 Dmel\CG8993 FB2020_03 GR IP04585 Jafrac1 NOX NOX-1 Nox Nox1 Prx1 Prx2 Prx3 Prx5 Sod2 Sod3 TPX-1 Trx-2 Trxr-1 Trxr1 anon-EST:Posey231 dCCS dNox dPrx1 dPrx5 dPrxV dnox dprx5 l(2)03221 prx5	Drosophila melanogaster (fruit fly)
Generic Transcription Pathway	Bonus, isoform C C2H2-type domain-containing protein C2H2-type domain-containing protein CTCF Combgap, isoform L D19A D19B Deformed wings FI01120p FI01202p FI01424p FI03704p FI20031p1 FI21258p1 FI21277p1 GEO09665p1 GH09339p GH18834p GH23506p Glucose transporter 4 enhancer factor, isoform G IP01005p IP01243p IP01247p IP01257p Jim, isoform F Klumpfuss, isoform B LD05664p LD08906p LD13921p LD18191p LD18373p LD24968p LD25151p LD25464p LD25880p LD28458p LD31554p LD33778p LD39136p LD39664p LD46263p LP13385p MIP04739p Molting defective, isoform D Protein charlatan Protein glass RE19438p RE74560p RH47711p RT01013p Serendipity locus protein H-1 Trade embargo Transcription factor Ouib Transcription factor Zelda Uncharacterized protein (Fragment) Uncharacterized protein, isoform A Uncharacterized protein Uncharacterized protein Zinc finger protein Elbow Zinc finger protein Noc Zinc finger protein Xfin Zinc finger protein kipf Zinc finger protein piragua Zinc finger protein weckle	A0A0B4K7S6 A0A0B4KFN3 A0A0B4KGE5 A8DYD1 A8JNL9 A8JQX6 M9PF84 M9PGG2 O96395 P13360 P15619 Q24423 Q4V6X9 Q7JW60 Q7K1V0 Q7KSP9 Q7KT79 Q7YU81 Q7YZ91 Q8INE2 Q8T051 Q8T053 Q960Q9 Q9I7J8 Q9VBR8 Q9VBR9 Q9VDN4 Q9VDQ3 Q9VDQ4 Q9VDQ5 Q9VEF0 Q9VEF4 Q9VFB9 Q9VG72 Q9VGK1 Q9VGQ6 Q9VGR8 Q9VHA9 Q9VHR4 Q9VI24 Q9VJL7 Q9VJN5 Q9VJS8 Q9VLK8 Q9VM77 Q9VN56 Q9VNZ4 Q9VQV3 Q9VRV4 Q9VRV5 Q9VRV6 Q9VRX0 Q9VS55 Q9VUS0 Q9VUU7 Q9VUU8 Q9VWC6 Q9VXQ6 Q9VXT1 Q9VYX0 Q9VYX2 Q9W3J9 Q9W403 Q9W4V9	0241/08 0249/12 0434/20 0487/06 150268_at 150269_at BG:DS02740.8 BG:DS04929.3 BcDNA:GH25505 BcDNA:GM06804 BcDNA:RE26825 BcDNA:RE63284 BcDNA:RE66512 BcDNA:RH63124 BcDNA:SD14927 Bon Bonus CC32 CC7 CG CG11243 CG11676 CG11695-RA CG12258 CG12802 CG12804 CG12805 CG13620 CG15687 CG15715-RA CG17373 CG17822 CG17847 CG18476-RA CG2714 CG31312 CG31372 CG31392 CG32469 CG33343 CG33975 CG42726-RA CG43757 CG4639 CG5135 CG7386-RA CG9469 CTCF Cg D-Glut4EF D.m Sens-2 D19A D19B DS02740.8 DS04929.3 DTS-3 DWG Dmel\CG10147 Dmel\CG10267 Dmel\CG10269 Dmel\CG10270 Dmel\CG10274 Dmel\CG10669 Dmel\CG11247 Dmel\CG11352 Dmel\CG11695 Dmel\CG11696 Dmel\CG11902 Dmel\CG12296 Dmel\CG12942 Dmel\CG14655 Dmel\CG14710 Dmel\CG15269 Dmel\CG15715 Dmel\CG17328 Dmel\CG17385 Dmel\CG17803 Dmel\CG18011 Dmel\CG18081 Dmel\CG18476 Dmel\CG18764 Dmel\CG2116 Dmel\CG2711 Dmel\CG2712 Dmel\CG31365 Dmel\CG31441 Dmel\CG31632 Dmel\CG3407 Dmel\CG34100 Dmel\CG34360 Dmel\CG3847 Dmel\CG42726 Dmel\CG4360 Dmel\CG4413 Dmel\CG4820 Dmel\CG4854 Dmel\CG4936 Dmel\CG5206 Dmel\CG5245 Dmel\CG6654 Dmel\CG6689 Dmel\CG6808 Dmel\CG7357 Dmel\CG7372 Dmel\CG7386 Dmel\CG7963 Dmel\CG8301 Dmel\CG8367 Dmel\CG8474 Dmel\CG8591 Dmel\CG8944 Dmel\CG9215 EG:95B7.6 EG:95B7.7 FBgn0051392 FU12 Glut4EF III Jim KLU Klu L(3)3[DTS] Meics Mld OVK Odj P09036 Phs SBP Sbp Sens-2 Sry-c ZIF ZW-5 ZW5 Zaf1 Zif Zw-5 Zw5 anon-3Be anon-84Eb anon-96CDa anon-WO0118547.391 anon-WO0118547.418 anon-WO0118547.611 b bon c cg cg3407 chn d19a d19b dCTCF dmCG6689 dwg elB fu2 gl idc jim kipf klu l(1)3Be l(1)zw5 l(2)07659 l(2)35Ea l(2)k11504 l(3)09036 l(3)10052 l(3)3[DTS] l(3)DTS3 l(3)S043420 mig mld noc nocA ovfc.K ovk pqp pra prg sens-2 sens-2-RA sens2 sry h-1 stretch trem ves vfl wdn wek zif zld zw-5 zw5	Drosophila melanogaster (fruit fly)
Regulation of lipid metabolism by PPARalpha	Brahma-associated protein of 60 kDa Ecdysone-induced protein 75B, isoform B F-box-like/WD repeat-containing protein ebi Fatty acid binding protein, isoform C Histone deacetylase Mediator of RNA polymerase II transcription subunit 1 Probable histone-arginine methyltransferase CARMER Protein ultraspiracle Regulator of nonsense transcripts 1 homolog Senataxin, isoform B Sin3A, isoform G Smrter, isoform G Taiman, isoform G Trimethylguanosine synthase histone acetyltransferase	A0A0B4K765 B7Z0D7 M9MS40 M9ND53 M9PGZ8 P13055 P20153 Q7KTS4 Q8INK3 Q95RJ9 Q9VEA4 Q9VH48 Q9VP05 Q9VYG2 Q9VYS3	0967/13 159A11T 27/3 58/2 97/15 Art4 Bap60 BcDNA:RH06221 BcDNA:RH46282 BcDNA:RH49003 BcDNA:SD12036 CBP CBP/p300 CBP_ CG12719 CG15321 CG18494 CG31241 CG31305 CG31305-PI CG8045 CT21061 CT24102 Carmer Cbp Cf1 Crbp DAIB1 DHDAC3 DTL DTLd DmHDAC3 DmTai DmTaiman Dmel\CG13109 Dmel\CG15319 Dmel\CG2128 Dmel\CG4013 Dmel\CG44890 Dmel\CG6783 Dmel\CG7504 Dmel\CG8815 Dtl E52 EP(2)2630 ES2-3 ESTS:159A11T EY2-9 Eip75B FABP HDAC HDAC3 Hdac 3 Hdac3 MED1 NEST:bs13g05 NR1D3 NR2B4 Nej Nejire P300 SIN3 SIN3A SMR SMRTER Setx Sin 3A Sin3 Sin3A Sin3a Smr TAI TGS1 Tai Taiman Tgs1 Trap220 Upf1 anon-EST:Posey234 anon-WO0140519.12 anon-WO0147981.11 anon-WO0153538.73 anon-WO03040301.89 bs13g05.y1 cbp dCBP dFabp dHDAC3 dKAT3 dORF dSETX dSin3 dSin3A dmCBP dmHDA402 dtl ebi fabp hdac3 l(1)G0060 l(1)G0112 l(1)G0350 l(1)G0361 l(1)G0470 l(2)01351 l(2)08269 l(2)k02703 l(2)k05415 l(2)k05802 l(2)k05809 l(2)k09715 l(3)S096713 ld lincRNA.983 nej nej CBP p300 p300/CBP sin3 sin3A sin3a smr sni3 tai tatl tgs1 usp	Drosophila melanogaster (fruit fly)
Regulation of TP53 Activity through Acetylation	Bromodomain containing 7/9 Bromodomain-containing protein homolog Chromatin assembly factor 1 p55 subunit Chromatin modification-related protein MEAF6 Chromodomain-helicase-DNA-binding protein 3 Chromodomain-helicase-DNA-binding protein Mi-2 homolog Histone deacetylase HDAC1 Inhibitor of growth protein 5 Meiotic P26, isoform F Metastasis associated 1-like, isoform D Methyl-CpG binding domain protein-like, isoform C RAC serine/threonine-protein kinase Simjang, isoform E histone acetyltransferase histone acetyltransferase p53 protein long form variant 1	A0A0B4KG70 A0A0B4KGZ0 A0A4D6K5H4 M9MS40 M9PF79 O16102 O97159 Q24572 Q7JVP4 Q8IMZ4 Q8INB9 Q94517 Q9VJY8 Q9VLX2 Q9VRN3 Q9W1A9	AF145661 Akt Akt1 BRD7 BRD7/9 BcDNA:GH10646 Br140 Brd7-9 Brd9 CBP CBP/p300 CBP_ CG10873 CG15321 CG31325 CG7983 CG8000 Caf1 Caf1-55 Cbp Cg11290 Chd3 Crbp D-p53 DMP53 Dm Mbd2/3 Dm-P53 DmMbd2/3 DmP53 Dmel\CG11290 Dmel\CG12218 Dmel\CG15319 Dmel\CG2244 Dmel\CG32067 Dmel\CG33336 Dmel\CG7154 Dmel\CG8208 Dmp53 Dp53 Eaf6 Enok HDAC1 Ing5 KAT6 MBD-like MBD2 MBD2-3 MBD2/3 MBD3 MEI-P26 MTA MTA-like MTA1 MTA1-like Mei-P26 Mi-2 Nej Nejire P300 P53 Rpd3 S1 SIMJ anon-60Ba anon-WO0118547.361 anon-WO0147981.11 anon-WO0200864.1 anon-WO0200864.2 anon-WO03040301.89 cbp dCBP dKAT3 dMBD-like dMBD2/3 dMTA dMTA-1 dMTA1-like dMbD2/3 dmCBP dmHAG406 dmP53 dmp53 dp53 dp66 enok l(1)G0112 l(1)G0350 l(1)G0470 l(3)01814 l(3)j4A5 l(3)rN672 mei-P26 mei-p26 meiP26 nej nej CBP p120 p300 p300/CBP p53 p66 p66/68 p66/68-like prac rot simj	Drosophila melanogaster (fruit fly)
SUMOylation of transcription cofactors	C-terminal-binding protein Dorsal interacting protein 4 E3 ubiquitin-protein ligase RING1 GEO09167p1 Nucleoplasmin-like protein Polycomb group protein Pc Polycomb group protein Psc Polycomb protein Scm Polyhomeotic distal, isoform A Polyhomeotic-proximal chromatin protein RNA helicase Scaffold attachment factor B, isoform B Small ubiquitin-related modifier Suppressor of variegation 2-10, isoform I Uncharacterized protein	A1Z7P5 O46036 O97102 P26017 P35820 P39769 Q27415 Q7KNM2 Q8IMV6 Q8MZI3 Q9VAC4 Q9VB08 Q9VHA0 Q9W2X8 Q9W523	BcDNA:HL01868 BcDNA:HL07910 CG12644 CG15311 CLOT2057 CRP1 CtBP DPIAS DROZFP DUbc9 Dm0342 DmPias DmRH5 DmSUMO-1 DmSmt3 DmUbc9 Dmel\CG10077 Dmel\CG3018 Dmel\CG3895 Dmel\CG43902 Dmel\CG4494 Dmel\CG6995 Dmel\CG7911 Dmel\CG8068 Dmsmt3 Dmubc9 Dpias EG:BACN25G24.3 FBgn0010602 Iwr LD22822 Lwr NPH Nlp Nph PH PH-d PHD PIAS Pc Ph Ph-d PhD Psc SAF-B SAFB SMT3 SU(VAR)2-10 SUMO Saf-B Sce Scm Smt3 Su(Var)2-10 Su(var)-10 Su(var)2-10 Su-var(2)10 Sumo Suvar(2)10 UBC9 Ubc 9 Ubc-9 Ubc9 Ubc9/Lwr UbcD9 ZIMP ZimpA ZimpB anon-EST:Posey240 cg10077 cg6995 dPIAS dSUMO dSmt3 dUBC9 dUbc9 dip4 dpias dsmt3 hbl i105 i184 i56 l(2)01519 l(2)02858 l(2)03697 l(2)04493 l(2)05486 l(2)05487 l(2)SH0182 l(2)SH2 0182 lwr p90 ph ph-D ph-d ph-p ph[D] ph[d] phd phm pias saf-b semi smt3 sumo ubc9 zimp	Drosophila melanogaster (fruit fly)
Repression of WNT target genes	C-terminal-binding protein Protein groucho Protein pangolin, isoform J	O46036 P16371 Q8IMA8	CtBP E(spl)m9/m10 TCF gro pan	Drosophila melanogaster (fruit fly)
Neurexins and neuroligins	CAP, isoform AC Carboxylesterase type B domain-containing protein Disks large 1 tumor suppressor protein FI03225p FI18641p1 FI21425p1 Fish-lips, isoform E GH01279p Guanylate kinase-associated protein mars Insulin-like growth factor-binding protein complex acid labile subunit LD13733p LD33734p LD44824p Neurexin 1, isoform F Neuroligin 1, isoform D Neuroligin 3, isoform B Neuroligin 4, isoform F Peripheral plasma membrane protein CASK Protein 4.1 homolog Toll-like receptor 7	A0A0B4KGL0 A0A6H2EDS1 A0A6M3Q7U5 A0A6M3QH40 A1Z9K8 P31007 Q24210 Q7K1T1 Q7K3L1 Q7KIN0 Q7KT70 Q9NGK5 Q9V8R9 Q9VFU8 Q9VIC6 Q9VIC7 Q9VS84 Q9VT89 Q9VZ84 Q9W1B3	BG:DS09217.3 BcDNA:AT13703 BcDNA:GH23107 CAP CAP/Vinexin CASK CG1062 CG12148 CG13354 CG13487 CG14596 CG14597 CG14836 CG15682 CG15683 CG18291 CG18409 CG31209 CG31499 CG32372-RA CG32465 CG3451 CG4054 CG5030 CG5035 CG6590 CG7545 CG8122 CT13464 CT1509 CT15760 CT20492 CT21808 CT32855 Caki D-ProSAP DCAP DNLG3 DNlg1 DNlg2 DNlg3 DNlg4 DNrx Dmel\CG10339 Dmel\CG13772 Dmel\CG18408 Dmel\CG30483 Dmel\CG31146 Dmel\CG32055 Dmel\CG32372 Dmel\CG34127 Dmel\CG34139 Dmel\CG34368 Dmel\CG3903 Dmel\CG7050 Dmel\CG7509 Dmel\CG8390 Dmel\CG9764 Dnlg2 Dnlg4 Dnrx F Fili GLI Gli Gli-RA Ltl Nbl4 Neuroligin Nlg-1 Nlg-2 Nlg-3 Nlg1 Nlg2 Nlg2-RA Nlg3 Nlg4 Nrx Nrx-1 Nrx-I Nrx1 ProSAP Prosap Prosap-RA Rexin Shank Toll-7 X Yrt Yurt anon-41Fa anon-EST:CL1a11 anon-WO0118547.149 anon-WO0118547.256 anon-WO0118547.98 cap cmg cora dNrx dlg1 dlhB dnl2 dnlg1 dnlg2 dnlg3 dnlg4 dnrx dnrx-1 dnrx1 fili gkap gli l(1)dlg1 l(2)07022 l(2)35Dg l(2)br45 l(3)87Ek l(3)E19 l(3)m112 l(3)tr lincRNA.S4366 ltl m112 mars n(2)k09033 neuroligin nl2 nlg1 nlg2 nrx nrx-1 nrx1 prosap rexin tartan/capricious-like vlc yrt	Drosophila melanogaster (fruit fly)
Formation of TC-NER Pre-Incision Complex	CDK-activating kinase assembly factor MAT1 COP9 signalosome complex subunit 1b COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 3 COP9 signalosome complex subunit 4 COP9 signalosome complex subunit 5 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 7 COP9 signalosome complex subunit 8 Cullin 4, isoform A Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA repair protein complementing XP-A cells homolog DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 GEO11084p1 GH07456p GH17761p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit Polyubiquitin Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor syf1 homolog RE31520p RING-box protein 1A RPB5 homolog Transcription elongation factor S-II Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein Uncharacterized protein, isoform D Zinc finger protein 830	A1Z9G2 B7Z018 O76513 O97183 P04052 P08266 P0CG69 P15357 P20232 P28518 P36958 Q02870 Q24216 Q24320 Q5BI50 Q6IGE3 Q7JZF5 Q7KLW9 Q7KPG8 Q7KSN8 Q7KTH8 Q7KVP9 Q8SYG2 Q94899 Q960E8 Q9V345 Q9V4S8 Q9VBY5 Q9VC49 Q9VCY3 Q9VEA5 Q9VFB5 Q9VHV6 Q9VJE4 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VUR1 Q9VVU5 Q9VYQ8 Q9W418 Q9W5E1 Q9XYZ5 Q9XZ58 R9PY16	142767_at 152117_at 154538_at AT-1 BG:DS00941.10 BcDNA.LD02793 BcDNA:LD02793 CCNH CD 7 CDK7 CG14037 CG14729 CG14730 CG18282 CG6572 CR11700 CR32744 CSN1b CSN2 CSN3 CSN4 CSN5 CSN6 CSN7 CSN8 CT36969 CUL4 Cdk7 Cul-4 Cul4 Cullin4 CycH D-rpII33 DDB1 DMcul-4 DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRPB5 DmSII DmUb DmUbi-p5E DmXPD Dmcdk7 Dmel\CG11115 Dmel\CG11246 Dmel\CG11700 Dmel\CG11839 Dmel\CG11979 Dmel\CG31155 Dmel\CG31368 Dmel\CG32744 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG5041 Dmel\CG5519 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG8711 Dmel\CG9433 Dmel\CG9667 Dmp34 Dmp52 Dmp8 EC2-11 ERCC2 ERCC3 ESTS:143G11T ESTS:199A6T GPB Gbp ISY1 MAT1 Mat1 Mo15 PRP19 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L Prp19 RNA Pol II RNA pol II RNA polII RNAP RP140 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 Roc1a RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 RpS27A Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SSL1 Ssl1 TFB2 TFB4 TFB5 TFB5 (uORF) TTDA TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Usp7 XPD XPD/ERCC2 Xpa Xpac Xpd Znf830 alien anon-WO0118547.648 anon-sts41 br17 cdk-7 cdk7 cul-4 cul-4-RA cul4 dCdk7 dCul4 dPrp19 dRpb7 fand fas hay l(2)07838 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(3)E35 l34Dg lincRNA.843 mrn ms(3)nc16 nc16 p34 p40[MO15] p44 p52 p8 pic pol II polII poly-ub prp19 quo rpII33 rpb3 ssl1 uORF xpd	Drosophila melanogaster (fruit fly)
Cyclin A:Cdk2-associated events at S phase entry	CDK-activating kinase assembly factor MAT1 Cdc25-like protein phosphatase twine Cyclin-H Cyclin-dependent kinase 2 Cyclin-dependent kinase 7 Dacapo Fizzy-related, isoform A G2/mitotic-specific cyclin-A M-phase inducer phosphatase RAC serine/threonine-protein kinase Uncharacterized protein, isoform C Wee1-like protein kinase	A0A0B4KF19 O76513 P14785 P20483 P23573 P54350 Q03019 Q24216 Q7JNL9 Q7KPG8 Q8INB9 Q9W4H9	142767_at APC/C[Fzr/Cdh1] AT-1 Akt Akt1 BcDNA:GH06193 CCNH CD 7 CDH1 CDI4 CDK7 CDKN2B CIB1 Cdh1 Cdh1/Fzr Cdh1FZR Cdh1[Fzr] Cdh[Fzr] Cdi4 Cdk2 Cdk7 CycA CycH DAP Dac Dacapo Dap Decapo DmCDK7 DmCdk7 DmMO15 DmMo15 Dmcdk7 Dmel\CG1772 Dmel\CG3000 Dmel\CG3319 Dmel\CG6191 Dmel\CG7405 Dmel\CG7614 Dromel_CG6191_FBtr0087678_mORF E(Sev-CycE)2B Fxr Fzr Fzr/rap Hec/Cdh[Fzr] MAT1 Mat1 Mo15 P15 Rap/Fzr Wee1 anon-WO03040301.193 cdc25 cdc2c cdh1 cdi4 cdk-7 cdk7 dCdk7 dFZR dap dap-RA fzr fzr/Cdh1 fzr/cdh1 l(1)G0326 l(1)G0418 l(2)04454 p21 p21[dacapo] p27 p27[Dap] p27cip/kip p40[MO15] rap rap/Fzr rap/fizzy-related rap/fzr redax stg twe wee wex	Drosophila melanogaster (fruit fly)
Cyclin E associated events during G1/S transition	CDK-activating kinase assembly factor MAT1 Cdc25-like protein phosphatase twine Cyclin-H Cyclin-dependent kinase 2 Cyclin-dependent kinase 7 Dacapo G1/S-specific cyclin-E M-phase inducer phosphatase RAC serine/threonine-protein kinase Uncharacterized protein, isoform C Wee1-like protein kinase	A0A0B4KF19 O76513 P20483 P23573 P54350 P54733 Q03019 Q24216 Q7JNL9 Q7KPG8 Q8INB9	142767_at AT-1 Akt Akt1 BcDNA:GH06193 CCNH CD 7 CDI4 CDK7 CDKN2B CIB1 Cdi4 Cdk2 Cdk7 CycE CycH DAP Dac Dacapo Dap Decapo DmCDK7 DmCdk7 DmMO15 DmMo15 Dmcdk7 Dmel\CG1772 Dmel\CG3319 Dmel\CG6191 Dmel\CG7405 Dmel\CG7614 Dromel_CG6191_FBtr0087678_mORF E(Sev-CycE)2B MAT1 Mat1 Mo15 P15 Wee1 cdc25 cdc2c cdi4 cdk-7 cdk7 dCdk7 dap dap-RA l(2)04454 p21 p21[dacapo] p27 p27[Dap] p27cip/kip p40[MO15] stg twe wee	Drosophila melanogaster (fruit fly)
Gap-filling DNA repair synthesis and ligation in TC-NER	CDK-activating kinase assembly factor MAT1 Cullin 4, isoform A Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA ligase 1 DNA ligase DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 FI04011p GEO08380p1 GEO11084p1 GH07456p GH17761p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD35209p Polyubiquitin Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor syf1 homolog RE31520p RING-box protein 1A RPB5 homolog Replication factor A protein 2 Replication factor C 38kD subunit, isoform A Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication protein A 70 kDa DNA-binding subunit Transcription elongation factor S-II Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein Uncharacterized protein, isoform D Zinc finger protein 830	A1Z9G2 B7Z018 O76513 O97183 P04052 P08266 P0CG69 P15357 P20232 P35600 P36958 P53034 Q02870 Q24216 Q24320 Q24492 Q5BI50 Q6IGE3 Q7JZF5 Q7KLW9 Q7KPG8 Q7KSN8 Q7KVP9 Q960E8 Q9U9Q1 Q9VBY5 Q9VC49 Q9VEA5 Q9VFB5 Q9VG84 Q9VHV6 Q9VIH1 Q9VJE4 Q9VKW3 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VUR1 Q9VX15 Q9VYQ8 Q9VYW3 Q9W1H4 Q9W418 Q9W5E1 Q9XYZ5 Q9Y095 R9PY16	142767_at 152117_at 153194_at 154538_at 4208 AT-1 BG:DS00941.10 BcDNA.LD02793 BcDNA:LD02793 BcDNA:LD06837 BcDNA:RH55360 CCNH CD 7 CDK7 CG14037 CG14729 CG14730 CG18282 CG6572 CR11700 CR32744 CT36969 CUL4 Cdk7 Cul-4 Cul4 Cullin4 CycH D-SSB D-rpII33 DDB1 DMcul-4 DNA-ligI DNA-ligII DNAlig1 DNAlig3 DRFC DRP-A DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRFC2 DmRFC3 DmRFC5 DmRP-A DmRPA DmRPB5 DmSII DmUb DmUbi-p5E DmXPD Dmcdk7 Dmel\CG11115 Dmel\CG11246 Dmel\CG11700 Dmel\CG11839 Dmel\CG11979 Dmel\CG15220 Dmel\CG17227 Dmel\CG31155 Dmel\CG31368 Dmel\CG32744 Dmel\CG3319 Dmel\CG34186 Dmel\CG4208 Dmel\CG42373 Dmel\CG5041 Dmel\CG5313 Dmel\CG5519 Dmel\CG6258 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG8142 Dmel\CG8711 Dmel\CG9273 Dmel\CG9433 Dmel\CG9667 Dmp34 Dmp52 Dmp8 EC2-11 ERCC2 ERCC3 ESTS:143G11T ESTS:199A6T GPB Gbp Gnf1 ISY1 LIG3 Lig3 MAT1 Mat1 Mo15 PRP19 Pol II Pol II RPII33 PolII PolIIo Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L Prp19 RFC2 RNA Pol II RNA pol II RNA polII RNAP RP-A RP140 RPA RPA 30 kDa RPA1 RPA2 RPA3 RPA30 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RfC RfC3 RfC38 RfC4 RfC40 Rfc3 Rfc37 Rfc38 Roc1a RpA-30 RpA2 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 RpS27A Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SSL1 Ssb-30 Ssl1 TFB2 TFB4 TFB5 TFB5 (uORF) TTDA TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Usp7 XPD XPD/ERCC2 XRCC1 XRCC1-RA Xpd Xrcc1 Znf830 anon-WO0118547.648 anon-sts41 br17 cdk-7 cdk7 cul-4 cul-4-RA cul4 dCdk7 dCul4 dPrp19 dRP-A dRPA2 dRpb7 fand fas hay l(1)G0241 l(2)07838 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(2)k13807 l(2)rfc38 l(3)E35 l34Dg lig 3 lig3 lig3-RA lincRNA.843 mrn ms(3)nc16 n(2)k13807 nc16 p34 p40[MO15] p44 p52 p8 pic pol II polII poly-ub prp19 rfc3 rfc38 rpII33 rpb3 ssl1 uORF xpd	Drosophila melanogaster (fruit fly)
Dual incision in TC-NER	CDK-activating kinase assembly factor MAT1 Cullin 4, isoform A Cyclin-H Cyclin-dependent kinase 7 DNA damage-binding protein 1 DNA polymerase epsilon catalytic subunit 1 DNA polymerase epsilon subunit 2 DNA polymerase epsilon subunit 3 DNA polymerase epsilon subunit 4 DNA repair endonuclease XPF DNA repair protein complementing XP-A cells homolog DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerase II subunit Rpb4 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Ercc1 GEO08380p1 GEO11084p1 GH07456p GH17761p General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription and DNA repair factor IIH subunit TFB5 General transcription factor IIH subunit 1 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit LD35209p Polyubiquitin Pre-mRNA-processing factor 19 Pre-mRNA-splicing factor syf1 homolog Proliferating cell nuclear antigen RE31520p RING-box protein 1A RPB5 homolog Replication factor A protein 2 Replication factor C 38kD subunit, isoform A Replication factor C subunit 1 Replication factor C subunit 2 Replication factor C subunit 3 Replication protein A 70 kDa DNA-binding subunit Transcription elongation factor S-II Ubiquitin carboxyl-terminal hydrolase 7 Ubiquitin-like domain-containing protein Ubiquitin-ribosomal protein eS31 fusion protein Uncharacterized protein, isoform D Zinc finger protein 830	A1Z9G2 B7Z018 O76513 O97183 P04052 P08266 P0CG69 P15357 P17917 P20232 P28518 P35600 P36958 P53034 Q02870 Q24087 Q24216 Q24320 Q24492 Q5BI50 Q6IGE3 Q7JZF5 Q7KLW9 Q7KMG7 Q7KPG8 Q7KSN8 Q7KVP9 Q960E8 Q9U9Q1 Q9V444 Q9VBY5 Q9VC49 Q9VCN1 Q9VEA5 Q9VFB5 Q9VHV6 Q9VIH1 Q9VJE4 Q9VKW3 Q9VNP8 Q9VNZ3 Q9VPX4 Q9VRQ7 Q9VUR1 Q9VX15 Q9VYQ8 Q9VYW3 Q9W256 Q9W418 Q9W5E1 Q9XYZ5 R9PY16	142767_at 152117_at 153194_at 154538_at AT-1 BG:DS00941.10 BcDNA.LD02793 BcDNA:LD02793 BcDNA:LD06837 BcDNA:RH55360 CCNH CD 7 CDK7 CG14037 CG14729 CG14730 CG18282 CG6572 CHRAC CHRAC14 CR11700 CR32744 CT36969 CUL4 Cdk7 Chrac-14 Cul-4 Cul4 Cullin4 CycH D-SSB D-rpII33 DDB1 DMcul-4 DNApol-epsilon DNApol-epsilon255 DNApol-epsilon58 DNApolE2 DNApolE3 DNApolE4 DRFC DRP-A DhR3 DhXPD DmCDK7 DmCdk7 DmMO15 DmMo15 DmRFC2 DmRFC3 DmRFC5 DmRP-A DmRPA DmRPB5 DmSII DmUb DmUbi-p5E DmXPD Dmcdk7 Dmel\CG10215 Dmel\CG11115 Dmel\CG11246 Dmel\CG11700 Dmel\CG11839 Dmel\CG11979 Dmel\CG15220 Dmel\CG31155 Dmel\CG31368 Dmel\CG32744 Dmel\CG3319 Dmel\CG34186 Dmel\CG42373 Dmel\CG5041 Dmel\CG5313 Dmel\CG5519 Dmel\CG6258 Dmel\CG7405 Dmel\CG7614 Dmel\CG7764 Dmel\CG7885 Dmel\CG8142 Dmel\CG8711 Dmel\CG9273 Dmel\CG9433 Dmel\CG9667 Dmp34 Dmp52 Dmp8 EC2-11 ERCC1 ERCC2 ERCC3 ESTS:143G11T ESTS:199A6T Ercc1 GPB Gbp Gnf1 ISY1 MAT1 Mat1 Mes4 Mo15 NF-Yc PCNA PCNA1 PRP19 Pol II Pol II RPII33 PolE1 PolE2 PolE4 PolII PolIIo Polepsilon Polr2A Polr2B Polr2C Polr2D Polr2E Polr2F Polr2G Polr2H Polr2I Polr2J Polr2K Polr2L Prp19 RFC2 RNA Pol II RNA pol II RNA polII RNAP RP-A RP140 RPA RPA 30 kDa RPA1 RPA2 RPA3 RPA30 RPB1 RPB12 RPB2 RPB3 RPB5 RPB6 RPB7 RPB8 Rbp3 RfC RfC3 RfC38 RfC4 RfC40 Rfc3 Rfc37 Rfc38 Roc1a RpA-30 RpA2 RpABC14 RpII140 RpII15 RpII18 RpII215 RpII33 RpS27A Rpb10 Rpb11 Rpb12 Rpb3 Rpb4 Rpb5 Rpb7 Rpb8 Rpll33 SSL1 Ssb-30 Ssl1 TFB2 TFB4 TFB5 TFB5 (uORF) TTDA TfIIS Tfb1 Tfb2 Tfb4 Tfb5 Tfb5-RB UB UB3-D UBI-F80 Ub Ubi Ubi-m Ubi-p5E Ubi-p5E5 Ubi-p63E Ubiq Ubiquitin Usp7 XPD XPD/ERCC2 Xpa Xpac Xpd Znf830 anon-WO0118547.648 anon-sts41 br17 cdk-7 cdk7 cul-4 cul-4-RA cul4 dCdk7 dCul4 dPrp19 dRP-A dRPA2 dRpb7 ercc1 fand fas hay l(1)G0241 l(2)07838 l(2)34Dg l(2)SH1279 l(2)SH2 1279 l(2)SH2 2137 l(2)SH2137 l(2)br17 l(2)k05605 l(2)k13807 l(2)rfc38 l(3)E35 l(3)pl10 l(3)pl10R l34Dg lincRNA.843 mary mei-9 mrn ms(3)nc16 mus209 n(2)k13807 nc16 p34 p40[MO15] p44 p52 p8 pic pol II polII poly-ub prp19 rfc3 rfc38 rpII33 rpb3 ssl1 uORF xpd	Drosophila melanogaster (fruit fly)

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