GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 251 - 275 of 360 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
Synthesis of 5-eicosatetraenoic acids
  • ALOX5
  • LTC4S
  • PON1
  • PON2
  • PON3
Sus scrofa (pig)
Opsins
  • LOC494564
  • OPN4
  • OPN5
  • RGR
  • RHO
  • RHO1
  • RRH
Sus scrofa (pig)
Interleukin-1 processing
  • CASP1
  • GSDMD
  • IGIF
  • IL18
  • IL1A
  • IL1B
  • IL1B2
  • LOC100154047
  • LOC110255300
  • LOC110258125
  • LOC110258578
  • LOC110259156
  • NFKB1
  • NFKB2
  • NFKB2_tv2
  • RELA
Sus scrofa (pig)
TNFR1-induced NF-kappa-B signaling pathway
  • BIRC2
  • CHUK
  • CYLD
  • GNB2L1
  • IKBKB
  • IKBKG
  • MAP3K7
  • OPTN
  • OTUD1
  • OTUD7B
  • PIAP
  • RACK1
  • RBCK1
  • RIPK1
  • RNF31
  • SPATA2
  • TAB1
  • TAB2
  • TAB3
  • TAK1b
  • TNF
  • TNFA
  • TNFAIP3
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF1
  • TRAF2
  • USP2
  • USP21
  • USP4
Sus scrofa (pig)
FGFR1c and Klotho ligand binding and activation
  • FGF23
  • FGFR1
  • KL
Sus scrofa (pig)
Vasopressin-like receptors
  • AVP
  • AVPR1A
  • AVPR1B
  • AVPR2
  • OXT
  • OXTR
Sus scrofa (pig)
ERBB2 Activates PTK6 Signaling
  • BTC
  • DTR
  • EGF
  • EGFR
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • HBEGF
  • HEGFL
  • NRG1
  • NRG2
  • NRG3
  • PTK6
Sus scrofa (pig)
Peptide hormone biosynthesis
  • POMC
Sus scrofa (pig)
RHOG GTPase cycle
  • ANKLE2
  • ARFGAP3
  • ARHGAP1
  • ARHGAP21
  • ARHGAP35
  • ARHGAP39
  • ARHGAP5
  • ARHGDIA
  • ARHGDIG
  • ARHGEF16
  • ARHGEF26
  • ARHGEF5
  • CAV1
  • CDC42
  • CDC42EP1
  • CYFIP1
  • DEPDC1B
  • DIAPH3
  • DOCK1
  • DOCK2
  • DOCK3
  • DOCK4
  • DOCK5
  • DSG2
  • ELMO2
  • EMD
  • EPHA2
  • ESYT1
  • GARRE1
  • HSPE1
  • IQGAP2
  • ITGB1
  • ITSN1
  • KIAA0355
  • KTN1
  • LAMTOR1
  • LBR
  • LETM1
  • LMAN1
  • MAP3K11
  • MCAM
  • MCF2
  • MCF2L
  • MPP7
  • NDUFA5
  • NDUFS3
  • OPHN1
  • PAK2
  • PGRMC2
  • PIK3R1
  • PLD1
  • PLEKHG3
  • PREX1
  • RAB7A
  • RBM39
  • RHOG
  • SHMT2
  • TFRC
  • TRIO
  • VAMP3
  • VANGL1
  • VAPB
  • VAV1
  • VAV2
  • YKT6
Sus scrofa (pig)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • ALG1
  • ALG12
  • ALG14
  • ALG2
  • ALG3
  • ALG8
  • ALG9
  • DPAGT1
  • MPDU1
Sus scrofa (pig)
Interferon gamma signaling
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • CAMK2G
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKCD
  • SOCS1
  • SOCS3
  • STAT1
  • socs1
Sus scrofa (pig)
Toll Like Receptor 7/8 (TLR7/8) Cascade
  • TLR7
Sus scrofa (pig)
Inactivation of CSF3 (G-CSF) signaling
  • CSF3
  • CSF3R
  • HCK
  • JAK1
  • JAK2
  • LYN
  • TYK2
Sus scrofa (pig)
Fructose biosynthesis
  • AKR1B1
  • SORD
Sus scrofa (pig)
Calcitonin-like ligand receptors
  • ADM
  • ADM2
  • AM
  • CALCB
  • CALCR
  • CRSP3
  • RAMP1
  • RAMP2
  • RAMP3
Sus scrofa (pig)
MET receptor recycling
  • ARF6
  • CRK
  • GAB1
  • GGA3
  • GRB2
  • HGF
  • MET
  • RAB4A
  • RAB4B
Sus scrofa (pig)
Toll Like Receptor 10 (TLR10) Cascade
  • TLR10
Sus scrofa (pig)
RND1 GTPase cycle
  • ALDH3A2
  • ARHGAP35
  • ARHGAP5
  • CAV1
  • CCDC88A
  • CPD
  • DEPDC1B
  • DLG5
  • DSP
  • DST
  • EPHA2
  • EPSTI1
  • FAM135A
  • FAM83B
  • FLOT2
  • FRS3
  • GRB7
  • KIDINS220
  • LOC100516390
  • MUC13
  • PIK3R1
  • PIK3R2
  • PKP4
  • PLEKHG5
  • PLXNA1
  • PTPN13
  • RASAL2
  • RBM39
  • RRAS2
  • TFRC
  • TMEM59
  • TXNL1
  • UBXN11
  • VANGL1
  • VANGL2
  • WDR6
Sus scrofa (pig)
Elastic fibre formation
  • ELN
  • FBLN5
  • FBN2
  • FBN3
  • FURIN
  • LOX
  • LOXL1
  • LOXL2
  • LOXL3
  • LOXL4
  • MFAP2
  • MFAP5
Sus scrofa (pig)
Platelet Aggregation (Plug Formation)
  • F2
  • GP1BB
  • GP5
  • GP9
  • GPIX
  • GPIbB
  • VWF
Sus scrofa (pig)
LDL clearance
  • AP2A1
  • AP2A2
  • AP2M1
  • AP2S1
  • APOB
  • CES3
  • CLTA
  • CLTC
  • LDLR
  • LDLRAP1
  • LIPA
  • NCEH1
  • NPC1
  • NPC2
  • PCSK9
  • SOAT1
  • SOAT2
Sus scrofa (pig)
Thyroxine biosynthesis
  • CGA
  • DUOX1
  • DUOX2
  • IYD
  • SLC5A5
  • TPO
  • TSHB
Sus scrofa (pig)
O-linked glycosylation of mucins
  • A4GNT
  • B3GNT2
  • B3GNT4
  • B3GNT5
  • B3GNT6
  • B3GNT7
  • B3GNT8
  • B3GNT9
  • B3GNTL1
  • B4GALT5
  • B4GALT6
  • C1GALT1
  • C1GALT1C1
  • CHST4
  • GALNT1
  • GALNT10
  • GALNT11
  • GALNT12
  • GALNT14
  • GALNT15
  • GALNT16
  • GALNT17
  • GALNT18
  • GALNT2
  • GALNT4
  • GALNT5
  • GALNT6
  • GALNT7
  • GALNT8
  • GALNT9
  • GALNTL5
  • GCNT1
  • GCNT3
  • GCNT4
  • GCNT7
  • MUC1
  • MUC13
  • MUC15
  • MUC2
  • MUC20
  • MUC4
  • MUC5AC
  • MUC5B
  • MUC6
Sus scrofa (pig)
Amine ligand-binding receptors
  • GPR143
Sus scrofa (pig)
Cilium Assembly
  • ATAT1
  • HDAC6
  • MEC17
Sus scrofa (pig)

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Last updated: August 19, 2024