GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome November 12, 2024
ECODAB April 1, 2019
Displaying entries 51 - 75 of 361 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
PTK6 promotes HIF1A stabilization
  • DTR
  • EGFR
  • GPNMB
  • HBEGF
  • HEGFL
  • HIF1A
  • LRRK2
  • PTK6
Sus scrofa (pig)
Transport of organic anions
  • AVP
  • SLC16A2
  • SLCO1A2
  • SLCO1B2
  • SLCO1C1
  • SLCO2A1
  • SLCO2B1
  • SLCO3A1
  • SLCO4A1
  • SLCO4C1
Sus scrofa (pig)
Asparagine N-linked glycosylation
  • ASGR1
  • ASGR2
  • LOC110255214
  • UMOD
Sus scrofa (pig)
SHC1 events in ERBB2 signaling
  • BTC
  • DTR
  • EGF
  • EGFR
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • HBEGF
  • HEGFL
  • NRG1
  • NRG2
  • NRG3
  • PRKCA
  • PRKCD
  • PRKCE
  • PTPN12
  • SHC1
Sus scrofa (pig)
Formation of the cornified envelope
  • CDSN
  • CELA2A
  • DSC1
  • DSC2
  • DSC3
  • DSG1
  • DSG2
  • DSG3
  • DSG4
  • DSP
  • ELA2
  • ELA2A
  • EVPL
  • JUP
  • Jup
  • KAZN
  • KLK12
  • KLK14
  • KLK5
  • LOC396866
  • PERP
  • PKP1
  • PKP2
  • PKP3
  • PKP4
  • PPL
  • RPTN
  • SPINK5
  • SPINK9
  • TCHH
  • TGM1
Sus scrofa (pig)
Regulation of necroptotic cell death
  • BIRC2
  • CASP8
  • CDC37
  • FADD
  • FLOT1
  • FLOT2
  • HSP90A
  • HSP90AA1
  • HSPCA
  • MLKL
  • PDCD6IP
  • PIAP
  • RIPK1
  • RIPK3
  • RPS27A
  • SDCBP
  • STUB1
  • TNFRSF6
  • TRADD
  • TRAF2
  • UBA52
  • UBB
  • UBC
  • UBE2L3
Sus scrofa (pig)
Sema4D mediated inhibition of cell attachment and migration
  • ARHGAP35
  • MET
  • PLXNB1
  • RAC1
  • RHOA
  • RRAS
  • SEMA4D
Sus scrofa (pig)
Role of phospholipids in phagocytosis
  • CD247
  • CD3G
  • FCGR1A
  • FCGR2B
  • FCGR3A
  • IGKV5-2
  • LOC100125542
  • LOC100523213
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PLA2G6
  • PLCG1
  • PLCG2
  • PLD1
  • PLD2
  • PLD3
  • PLD4
  • PLPP4
  • PLPP5
  • PRKCD
  • PRKCE
Sus scrofa (pig)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
  • CCNC
  • CCNK
  • CCNT1
  • CCNT2
  • CDK8
  • CDK9
  • E2F4
  • E2F5
  • FURIN
  • MADH3
  • MADH4
  • MAPK1
  • MAPK3
  • MEN1
  • RBL1
  • RNF111
  • RPS27A
  • SMAD2
  • SMAD3
  • SMAD4
  • SMAD7
  • SP1
  • Smad7
  • TFDP1
  • UBA52
  • UBB
  • UBC
  • WWTR1
Sus scrofa (pig)
Glycosphingolipid biosynthesis
  • A4GALT
  • B3GALNT1
  • B3GALT3
  • B3GALT4
  • B3GNT5
  • B4GALNT1
  • B4GALT5
  • B4GALT6
  • CERK
  • FUT1
  • FUT2
  • GAL3ST1
  • ST3GAL-III
  • ST3GAL2
  • ST3GAL3
  • ST3GAL5
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA5
  • UGCG
  • UGT8
Sus scrofa (pig)
Regulation of actin dynamics for phagocytic cup formation
  • ABI1
  • ABI2
  • ABL1
  • ACTB
  • ACTG1
  • ACTR3
  • ARPC1A
  • ARPC1B
  • ARPC2
  • ARPC3
  • ARPC5
  • BAIAP2
  • BRK1
  • CD247
  • CD3G
  • CDC42
  • CRK
  • CYFIP1
  • CYFIP2
  • DOCK1
  • ELMO2
  • FCGR1A
  • FCGR2B
  • FCGR3A
  • GRB2
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPCA
  • IGKV5-2
  • LIMK1
  • LOC100125542
  • LOC100523213
  • MAPK1
  • MAPK3
  • MYH9
  • MYO10
  • MYO1C
  • MYO9B
  • NCK1
  • NCKAP1
  • NCKAP1L
  • NCKIPSD
  • NF2
  • PAK1
  • RAC1
  • VAV1
  • VAV2
  • WASF2
  • WASF3
  • WASL
  • WIPF1
Sus scrofa (pig)
Dissolution of Fibrin Clot
  • ANXA2
  • HRG
  • PAI1
  • PLANH1
  • PLAT
  • PLAU
  • PLG
  • S100A10
  • SERPINB2
  • SERPINB6
  • SERPINB8
  • SERPINE1
  • SERPINE2
  • SERPINF2
Sus scrofa (pig)
EGFR interacts with phospholipase C-gamma
  • AREG
  • BTC
  • DTR
  • EGF
  • EGFR
  • EREG
  • HBEGF
  • HEGFL
  • PLCG1
  • TGFA
Sus scrofa (pig)
Intestinal hexose absorption
  • GLUT2
  • SLC2A2
  • SLC2A5
  • SLC5A1
Sus scrofa (pig)
Organic anion transport
  • OAT2
  • OAT3
  • SLC22A11
  • SLC22A12
  • SLC22A6
  • SLC22A7
  • SLC22A8
Sus scrofa (pig)
Ovarian tumor domain proteases
  • APC
  • CDK1
  • ESR
  • ESR1
  • NR3A1
  • OTUB1
  • OTUB2
  • OTUD3
  • OTUD7A
  • OTUD7B
  • P53
  • PTEN
  • RHOA
  • RIPK1
  • RNF128
  • RPS27A
  • TNFAIP3
  • TNIP1
  • TNIP2
  • TNIP3
  • TP53
  • TRAF3
  • TRAF6
  • UBA52
  • UBB
  • UBC
  • UBE2D1
  • VCPIP1
  • YOD1
  • ZRANB1
Sus scrofa (pig)
Platelet homeostasis
  • P2RX1
  • P2RX2
  • P2RX3
  • P2RX4
  • P2RX5
  • P2RX6
  • P2RX7
  • PAFAH2
Sus scrofa (pig)
Interleukin-2 signaling
  • IL2
  • IL2RA
  • IL2RB
  • IL2RG
  • JAK1
  • JAK3
  • LCK
  • PTK2B
  • SHC1
  • STAT5A
  • STAT5B
  • stat5B
Sus scrofa (pig)
Advanced glycosylation endproduct receptor signaling
  • A4
  • AD1
  • AGER
  • APP
  • CAPZA1
  • CAPZA2
  • S100A12
  • S100B
Sus scrofa (pig)
Phase 4 - resting membrane potential
  • IRK1
  • KCNJ12
  • KCNJ14
  • KCNJ2
  • KCNJ4
  • KCNK1
  • KCNK10
  • KCNK12
  • KCNK13
  • KCNK15
  • KCNK16
  • KCNK17
  • KCNK3
  • KCNK4
  • KCNK5
  • KCNK6
  • KCNK7
  • KCNK9
Sus scrofa (pig)
Gluconeogenesis
  • ALDOA
  • ALDOB
  • ALDOC
  • ENO2
  • ENO3
  • ENO4
  • FBP
  • FBP1
  • FBP2
  • G6PC
  • G6PC1
  • G6PC3
  • GAPD
  • GAPDH
  • GAPDHS
  • GPI
  • PC
  • PCK1
  • PCK2
  • PEPCK1
  • PGAM1
  • PGAM2
  • PGK1
  • PGK2
  • SLC37A1
  • SLC37A2
  • TPI1
Sus scrofa (pig)
Toll Like Receptor 4 (TLR4) Cascade
  • BPI
  • CD14
  • CD180
  • DNM1
  • DNM2
  • DNM3
  • ITGAM
  • ITGB2
  • LBP
  • LY64
  • LY86
  • LY96
  • PLCG2
  • TICAM2
  • TLR4
Sus scrofa (pig)
Erythropoietin activates Phosphoinositide-3-kinase (PI3K)
  • EPO
  • EPOR
  • GAB1
  • IRS2
  • JAK2
  • LYN
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3CG
  • PIK3R1
  • PIK3R5
Sus scrofa (pig)
Transferrin endocytosis and recycling
  • ATP6AP1
  • ATP6G2
  • ATP6V0A1
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E2
  • ATP6V1B1
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1G2
  • ATP6V1H
  • HFE
  • MCOLN1
  • STEAP3
  • STEAP4
  • TCIRG1
  • TF
  • TFR2
  • TFRC
Sus scrofa (pig)
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
  • MAN1A1
  • MAN1A2
  • MAN1C1
Sus scrofa (pig)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: February 17, 2025