GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 557 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Erythrocytes take up carbon dioxide and release oxygen
  • AQP1
  • CA1
  • CA2
  • CA4
  • CYB5R1
  • CYB5R2
  • CYB5R4
  • CYB5RL
  • HBA
  • HBB
  • RHAG
  • SLC4A1
Bos taurus (cattle)
Endogenous sterols
  • ADX
  • AHR
  • ARNT
  • ARNT2
  • CYP11A1
  • CYP11B1
  • CYP19A1
  • CYP1B1
  • CYP21
  • CYP21A1
  • CYP21A2
  • CYP27A1
  • CYP39A1
  • CYP46A1
  • CYP4V2
  • CYP51A1
  • CYP7A1
  • FDX1
  • FDX1L
  • FDX2
  • FDXR
  • LOC112449566
  • NCOA1
  • NCOA2
  • NR1H4
  • POMC
  • RXRA
Bos taurus (cattle)
Elevation of cytosolic Ca2+ levels
  • ITPR1
  • ITPR2
  • ITPR3
  • P2RX1
  • P2RX2
  • P2RX3
  • P2RX4
  • P2RX5
  • P2RX6
  • P2RX7
  • TRP6
  • TRPC3
  • TRPC6
  • TRPC7
Bos taurus (cattle)
Electric Transmission Across Gap Junctions
  • GJA10
  • GJA7
  • GJA9
  • GJC1
  • GJD2
  • PANX
  • PANX1
  • PANX2
Bos taurus (cattle)
Elastic fibre formation
  • ELN
  • FBLN5
  • FBN1
  • FBN2
  • FURIN
  • ITGAV
  • ITGB1
  • ITGB3
  • ITGB6
  • LOX
  • LOXL1
  • LOXL2
  • LOXL3
  • LOXL4
  • MFAP5
Bos taurus (cattle)
Eicosanoid ligand-binding receptors
  • OXER1
Bos taurus (cattle)
Effects of PIP2 hydrolysis
  • DGKA
  • DGKB
  • DGKD
  • DGKE
  • DGKI
  • DGKK
  • DGKQ
  • DGKZ
  • ITPR1
  • ITPR2
  • ITPR3
  • PRKCD
  • PRKCH
  • PRKCQ
  • TRP6
  • TRPC3
  • TRPC6
  • TRPC7
Bos taurus (cattle)
ESR-mediated signaling
  • ESR
  • ESR1
  • ESR2
  • FKBP4
  • FKBP5
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPC3
  • HSPCA
  • HSPCB
  • NR3A1
  • NR3A2
  • PPP5C
  • PTGES3
Bos taurus (cattle)
EPHB-mediated forward signaling
  • ACTB
  • ACTG
  • ACTG1
  • ACTR2
  • ACTR3
  • ARHA
  • ARHGEF28
  • ARP2
  • ARP3
  • ARPC1A
  • ARPC1B
  • ARPC2
  • ARPC3
  • ARPC4
  • ARPC5
  • CDC42
  • ITSN1
  • PAK1
  • PTK2
  • RASA1
  • RHO12
  • RHOA
  • ROCK1
  • ROCK2
  • SDC2
  • WASL
Bos taurus (cattle)
EPH-ephrin mediated repulsion of cells
  • APH1A
  • APH1B
  • EFNB1
  • EFNB2
  • EFNB3
  • EPHB1
  • EPHB2
  • EPHB3
  • EPHB4
  • EPHB6
  • FYN
  • LYN
  • MMP2
  • MMP9
  • NCSTN
  • PEN2
  • PSEN1
  • PSEN2
  • PSENEN
  • SRC
  • VAV2
  • VAV3
  • YES1
Bos taurus (cattle)
EPH-Ephrin signaling
  • EFNA1
  • EFNA2
  • EFNA3
  • EFNA4
  • EFNA5
  • EFNB1
  • EFNB2
  • EFNB3
  • EPHA1
  • EPHA10
  • EPHA2
  • EPHA3
  • EPHA4
  • EPHA5
  • EPHA7
  • EPHB1
  • EPHB2
  • EPHB3
  • EPHB4
  • EPHB6
Bos taurus (cattle)
ECM proteoglycans
  • ACAN
  • AGRN
  • BCAN
  • BGN
  • COMP
  • CRTL1
  • CSPG2
  • DCN
  • DMP1
  • DSPP
  • HAPLN1
  • ITGA2
  • ITGA2B
  • ITGA7
  • ITGA9
  • ITGAV
  • ITGAX
  • ITGB1
  • ITGB3
  • ITGB5
  • ITGB6
  • MATN1
  • MATN3
  • MATN4
  • NCAN
  • SERPINE1
  • SPARC
  • TNC
  • TNN
  • TNR
  • TNXB
  • VCAN
  • VTN
Bos taurus (cattle)
Downstream signaling of activated FGFR1
  • AFGF
  • FGF1
  • FGF10
  • FGF17
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF5
  • FGF5C
  • FGF6
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR1
  • FLRT1
  • FLRT2
  • FLRT3
  • Fgf4
  • HBGF-1
  • KL
Bos taurus (cattle)
Downstream signal transduction
  • BCAR1
  • CRK
  • CRKL
  • GRB2
  • GRB7
  • KRAS
  • MGF
  • NCK1
  • NCK2
  • NRAS
  • PDGFA
  • PDGFB
  • PDGFRA
  • PDGFRB
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PLCG1
  • PTPN11
  • RAPGEF1
  • RASA1
  • SOS1
  • SRC
  • STAT1
  • STAT3
  • STAT5A
  • STAT5B
  • STAT6
Bos taurus (cattle)
Downstream TCR signaling
  • BCL10
  • BLA-DQB
  • BOLA-DQA1
  • BOLA-DQA2
  • BOLA-DQA5
  • BOLA-DRA
  • BOLA-DRB2
  • BOLA-DRB3
  • BOLA-DYA
  • BOLA-DYB
  • BoLA-DIB
  • BoLA-DRA
  • BoLA-DYB
  • CARD11
  • CD247
  • CD3D
  • CD3E
  • CD3G
  • CD4
  • CDC34
  • CHUK
  • CUL1
  • DYB
  • FBXW11
  • HLA-DRA
  • IKBKB
  • IKBKG
  • IKKA
  • INPP5D
  • LCK
  • LOC100848815
  • MALT1
  • MAP3K7
  • NEMO
  • NFKB1
  • NFKBIA
  • PDPK1
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PRKCQ
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • PTEN
  • RELA
  • RIPK2
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TAB2
  • TRAF6
  • TRAP2
  • TRAT1
  • TRAV29-1
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBC4
  • UBCEP1
  • UBCEP2
  • UBCH4
  • UBCH5B
  • UBE2D1
  • UBE2D2
  • bIkBa
Bos taurus (cattle)
Downregulation of TGF-beta receptor signaling
  • BAMBI
  • MTMR4
  • RPS27A
  • SMAD2
  • SMAD3
  • SMAD7
  • SMURF2
  • STRAP
  • STUB1
  • TGFB1
  • TGFBR1
  • TGFBR2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Dopamine receptors
  • D1AR
  • DRD1
  • DRD2
  • DRD3
  • DRD5
Bos taurus (cattle)
Dopamine Neurotransmitter Release Cycle
  • CASK
  • CPLX1
  • LIN7A
  • LIN7B
  • LIN7C
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A2
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYN1
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Dissolution of Fibrin Clot
  • ANX2
  • ANXA2
  • CAL1L
  • CLP11
  • HRG
  • LOC281376
  • LOC617406
  • PLAT
  • PLAU
  • PLAUR
  • PLG
  • PLI
  • S100A10
  • SERPINB8
  • SERPINE1
  • SERPINE2
  • SERPINF2
Bos taurus (cattle)
Disassembly of the destruction complex and recruitment of AXIN to the membrane
  • AMER1
  • APC
  • AXIN1
  • CAV1
  • CSNK1A1
  • CTNNB1
  • DVL1
  • DVL2
  • DVL3
  • FRAT2
  • FZD1
  • FZD2
  • FZD5
  • GSK3B
  • LRP5
  • LRP6
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5D
  • PPP2R5E
  • WNT1
  • WNT3A
  • WNT8A
  • WNT8B
Bos taurus (cattle)
Digestion of dietary lipid
  • CEL
  • CLPS
  • LIPF
  • PNLIP
  • PNLIPRP2
  • PNLIPRP3
Bos taurus (cattle)
Digestion of dietary carbohydrate
  • CHIA
  • LCT
  • LOC539383
  • MGAM2
  • SI
Bos taurus (cattle)
Digestion
  • GUCA2A
  • GUCA2B
  • GUCY2C
  • LOC516378
  • PIR
Bos taurus (cattle)
Detoxification of Reactive Oxygen Species
  • AOP1
  • AOP2
  • CAT
  • CCS
  • CYBA
  • CYBB
  • CYC
  • CYCS
  • ERO1A
  • ERO1L
  • GPX
  • GPX1
  • GPX3
  • GPX5
  • GPX7
  • GPX8
  • GSR
  • GSTP1
  • NCF1
  • NCF2
  • NCF4
  • NOX4
  • NOX5
  • NUDT2
  • P4HB
  • PHGPX
  • PRDX1
  • PRDX2
  • PRDX3
  • PRDX5
  • PRDX6
  • SOD1
  • SOD2
  • SOD3
  • TRXR2
  • TXN
  • TXN2
  • TXNRD1
  • TXNRD2
Bos taurus (cattle)
Dermatan sulfate biosynthesis
  • BCAN
  • BGN
  • CHST14
  • CSPG2
  • CSPG4
  • CSPG5
  • DCN
  • DSE
  • DSEL
  • NCAN
  • UST
  • VCAN
Bos taurus (cattle)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024