GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1 - 25 of 557 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
A tetrasaccharide linker sequence is required for GAG synthesis
  • AGRN
  • B3GALT6
  • B3GAT1
  • B3GAT3
  • B4GALT7
  • BCAN
  • BGN
  • CSPG2
  • CSPG4
  • CSPG5
  • DCN
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • NCAN
  • SDC1
  • SDC2
  • SDC4
  • VCAN
  • XYLT1
  • XYLT2
Bos taurus (cattle)
ABC-family proteins mediated transport
  • ABCA4
  • ABCB1
  • ABCB4
  • ABCB9
  • ABCC1
  • ABCC10
  • ABCC11
  • ABCC2
  • ABCC3
  • ABCC5
  • ABCC9
  • ABCF1
  • ABCR
  • CFTR
  • DERL1
  • DERL2
  • DERL3
  • EIF2A
  • EIF2S1
  • EIF2S2
  • EIF2S3
  • ERLEC1
  • ERLIN1
  • ERLIN2
  • KCNJ11
  • LOC515333
  • MRP1
  • OS9
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RNF185
  • RNF5
  • RPS27A
  • SEL1L
  • SPFH2
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • VCP
Bos taurus (cattle)
ABO blood group biosynthesis
  • ABO
  • FUT1
  • FUT2
Bos taurus (cattle)
ADP signalling through P2Y purinoceptor 1
  • CPLA2
  • GNA11
  • GNA14
  • GNA15
  • GNAQ
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • MAPK14
  • P2RY1
  • PLA2G4
  • PLA2G4A
  • SRC
Bos taurus (cattle)
APAP ADME
  • ABCC1
  • ABCC2
  • ABCC3
  • ABCC5
  • ABCG2
  • ACY1
  • CNDP2
  • GGT1
  • GGT5
  • GGT7
  • GGTL3
  • GSTM4
  • GSTP1
  • GSTT1
  • LOC100138004
  • LOC100138908
  • LOC100296421
  • LOC100300896
  • LOC515333
  • MRP1
  • NAT1
  • STP
  • SULT1A1
  • SULT1E1
  • SULT2A1
  • UGT2B10
Bos taurus (cattle)
APC/C:Cdc20 mediated degradation of Securin
  • ANAPC1
  • ANAPC10
  • ANAPC11
  • ANAPC15
  • ANAPC16
  • ANAPC2
  • ANAPC4
  • ANAPC5
  • ANAPC7
  • ANAPC8
  • CDC16
  • CDC20
  • CDC23
  • CDC26
  • CDC27
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UBCH10
  • UBE2C
  • UBE2D1
  • UBE2E1
  • UBE2S
Bos taurus (cattle)
APC/C:Cdc20 mediated degradation of mitotic proteins
  • ANAPC1
  • ANAPC10
  • ANAPC11
  • ANAPC15
  • ANAPC16
  • ANAPC2
  • ANAPC4
  • ANAPC5
  • ANAPC7
  • ANAPC8
  • BUB1B
  • BUB3
  • CDC16
  • CDC20
  • CDC23
  • CDC26
  • CDC27
  • MAD2L1
  • UBCH10
  • UBE2C
  • UBE2D1
  • UBE2E1
  • UBE2S
Bos taurus (cattle)
APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1
  • AIK
  • AIRK1
  • ANAPC1
  • ANAPC10
  • ANAPC11
  • ANAPC15
  • ANAPC16
  • ANAPC2
  • ANAPC4
  • ANAPC5
  • ANAPC7
  • ANAPC8
  • ARK1
  • AURA
  • AURKA
  • AURKB
  • AYK1
  • BTAK
  • CDC16
  • CDC20
  • CDC23
  • CDC26
  • CDC27
  • FZR1
  • IAK1
  • PLK1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RB1
  • RPS27A
  • SKP2
  • STK15
  • STK6
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • UBCH10
  • UBE2C
  • UBE2D1
  • UBE2E1
  • UBE2S
Bos taurus (cattle)
ATF6 (ATF6-alpha) activates chaperones
  • ATF6
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
ATF6B (ATF6-beta) activates chaperones
  • ATF6B
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
AUF1 (hnRNP D0) binds and destabilizes mRNA
  • EIF4G1
  • HNRNPD
  • HSC70
  • HSP27
  • HSP70-1
  • HSPA1A
  • HSPA8
  • HSPB1
  • PABP1
  • PABPC1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RPS27A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Abacavir transmembrane transport
  • OCT1
  • SLC22A1
  • SLC22A2
  • SLC22A3
Bos taurus (cattle)
Acetylcholine Neurotransmitter Release Cycle
  • CHAT
  • CPLX1
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A3
  • SLC5A7
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Acrosome Reaction and Sperm:Oocyte Membrane Binding
  • ACR
  • CD9
  • IZUMO1
  • IZUMO2
  • IZUMO3
  • IZUMO4
Bos taurus (cattle)
Activated NTRK3 signals through PI3K
  • NTF3
  • NTRK3
  • SRC
Bos taurus (cattle)
Activated NTRK3 signals through PLCG1
  • NTF3
  • NTRK3
  • PLCG1
Bos taurus (cattle)
Activation of C3 and C5
  • BF
  • C2
  • C3
  • C4A
  • C5
  • CFB
  • LOC107131209
Bos taurus (cattle)
Activation of G protein gated Potassium channels
  • GABBR1
  • GABBR2
  • GIRK1
  • GIRK4
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • IRK1
  • KCNJ10
  • KCNJ12
  • KCNJ15
  • KCNJ16
  • KCNJ2
  • KCNJ3
  • KCNJ4
  • KCNJ5
  • KCNJ6
Bos taurus (cattle)
Activation of Matrix Metalloproteinases
  • COL18A1
  • CTRB1
  • CTSK
  • CTSL
  • CTSL1
  • ELANE
  • FURIN
  • KLK1
  • KLKB1
  • KLNA1
  • LOC100139881
  • LOC112441463
  • LOC112442231
  • LOC509956
  • LOC540321
  • MMP11
  • MMP13
  • MMP14
  • MMP15
  • MMP16
  • MMP17
  • MMP2
  • MMP24
  • MMP25
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PLG
  • PRSS2
  • TIMP2
  • TPSB1
Bos taurus (cattle)
Activation of NF-kappaB in B cells
  • BCL10
  • CARD11
  • CHUK
  • CUL1
  • FBXW11
  • IKBKB
  • IKBKG
  • IKKA
  • MALT1
  • NEMO
  • NFKB1
  • NFKBIA
  • NFKBIB
  • NFKBIE
  • PRKCB
  • PRKCB1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • REL
  • RELA
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • bIkBa
Bos taurus (cattle)
Activation of the phototransduction cascade
  • CNCG
  • CNCG1
  • CNGA1
  • CNGB1
  • GNAT1
  • GNB1
  • GNGT1
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEG
  • RHO
Bos taurus (cattle)
Acyl chain remodelling of PC
  • CPLA2
  • LOC613966
  • LPCAT1
  • LPCAT2
  • LPCAT3
  • LPCAT4
  • MBOAT2
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2G6
  • PLA2R1
  • PLBD1
  • PNPLA8
  • TMEM86B
Bos taurus (cattle)
Acyl chain remodelling of PE
  • ABHD4
  • CPLA2
  • HRASLS5
  • LOC613966
  • LPCAT3
  • LPCAT4
  • MBOAT1
  • MBOAT2
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2G6
  • PLA2R1
  • PLAAT1
  • PLAAT5
  • PLBD1
  • PNPLA8
Bos taurus (cattle)
Acyl chain remodelling of PG
  • CPLA2
  • CRLS1
  • LOC613966
  • LPCAT1
  • LPCAT4
  • LPGAT1
  • PLA2G12A
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4F
  • PLA2R1
Bos taurus (cattle)
Acyl chain remodelling of PI
  • CPLA2
  • LENG4
  • LOC613966
  • MBOAT7
  • OACT7
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2R1
  • PLBD1
Bos taurus (cattle)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024