GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 101 - 125 of 268 in total
Pathway Name Protein Name UniProt ID ▼ Gene Symbol Organism GlyTouCan ID
Phase I - Functionalization of compounds
  • AADAC
  • AHR
  • AHRR
  • ALDH3
  • ALDH3A1
  • AOC2
  • AOC3
  • ARNT
  • ARNT2
  • BPHL
  • C5BR
  • CBR3
  • CES2
  • CES5A
  • CMBL
  • CYB5B
  • CYB5R3
  • CYP2B6
  • CYP3A12
  • DIA1
  • EPHX1
  • LOC119868939
  • LOC119875773
  • LOC119876349
  • MTARC1
  • NQO2
Canis familiaris (dog)
Pentose phosphate pathway
  • DERA
  • G6PD
  • PGD
  • PGLS
  • PGM2
  • RBKS
  • RPE
  • RPIA
  • SHPK
  • TALDO1
  • TKT
Canis familiaris (dog)
A tetrasaccharide linker sequence is required for GAG synthesis
  • AGRN
  • B3GALT6
  • B3GAT1
  • B3GAT2
  • B3GAT3
  • B4GALT7
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • DCN1C
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GPC6
  • NCAN
  • SDC1
  • SDC3
  • SDC4
  • VCAN
  • XYLT1
  • XYLT2
Canis familiaris (dog)
HS-GAG degradation
  • AGRN
  • GLB1
  • GLB1L
  • GLB1L2
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GPC6
  • GUSB
  • HPSE
  • HPSE2
  • IDS
  • IDUA
  • NAGLU
  • SDC1
  • SDC3
  • SDC4
  • SGSH
  • ids
Canis familiaris (dog)
FGFR1b ligand binding and activation
  • FGF1
  • FGF10
  • FGF22
  • FGF3
  • FGFR1
  • GIPC1
  • TGFBR3
Canis familiaris (dog)
Serotonin receptors
  • 5-HTR2A
  • HTR1B
  • HTR1D
  • HTR1E
  • HTR1F
  • HTR2A
  • HTR2B
  • HTR2C
  • HTR4
  • HTR5A
  • HTR6
  • HTR7
Canis familiaris (dog)
Transport of bile salts and organic acids, metal ions and amine compounds
  • SLC10A6
  • SLC14A1
  • SLC14A2
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • SLC44A5
  • SLC47A1
  • SLC47A2
  • SLC5A7
Canis familiaris (dog)
MET interacts with TNS proteins
  • HGF
  • ITGB1
  • MET
  • TNS3
  • TNS4
Canis familiaris (dog)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • AMFR
  • DERL1
  • ENGASE
  • NGLY1
  • PSMC1
  • RAD23B
  • RPS27A
  • UBA52
  • UBB
  • UBC
  • UBCEP2
  • UBXN1
  • VCP
Canis familiaris (dog)
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes
  • CTSL
  • CTSL1
  • SERPINB13
Canis familiaris (dog)
Activation of the phototransduction cascade
  • CNGA1
  • CNGB1
  • GNAT1
  • GNB1
  • GNGT1
  • PDBS
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEA
  • PDEB
  • PDEG
  • RHO
Canis familiaris (dog)
Antigen Presentation: Folding, assembly and peptide loading of class I MHC
  • B2M
  • CALR
  • CANX
  • DLA-12
  • DLA-79
  • DLA-DOB
  • DLA88
  • ERAP1
  • HSPA5
  • LOC119876190
  • LOC119876868
  • PDIA3
  • SEC13
  • SEC23A
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SEC31A
  • TAPBP
Canis familiaris (dog)
VxPx cargo-targeting to cilium
  • ARF4
  • ASAP1
  • CNGA2
  • CNGA4
  • CNGB1
  • EXOC1
  • EXOC2
  • EXOC3
  • EXOC4
  • EXOC5
  • EXOC6
  • EXOC7
  • EXOC8
  • GBF1
  • MEL
  • PKD2
  • RAB11
  • RAB11A
  • RAB11FIP3
  • RAB3IP
  • RAB8
  • RAB8A
  • RHO
Canis familiaris (dog)
Inactivation, recovery and regulation of the phototransduction cascade
  • CALM2
  • CAMKMT
  • CNGA1
  • CNGB1
  • GNAT1
  • GNB5
  • GRK1
  • GRK4
  • GRK7
  • GUCA1A
  • GUCA1C
  • GUCY2D
  • GUCY2F
  • METAP1
  • METAP2
  • NMT1
  • NMT2
  • PDBS
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEA
  • PDEB
  • PDEG
  • PPEF1
  • RCV1
  • RCVRN
  • RGS9
  • RGS9BP
  • RHO
  • SAG
Canis familiaris (dog)
Other interleukin signaling
  • CASP3
  • CD4
  • CSF1
  • CSF1R
  • CSF3
  • CSF3R
  • IFNLR1
  • IL10RB
  • IL16
  • IL29L
  • IL34
  • JAK1
  • PTPRZ1
  • SDC1
  • SNAP25
  • STX1A
  • STX3
  • STX4
  • STXBP2
  • TXLNA
  • TYK2
  • VAMP2
Canis familiaris (dog)
Digestion of dietary carbohydrate
  • CHIA
  • LCT
  • LOC119879923
  • LOC119881526
  • MGAM
  • SI
Canis familiaris (dog)
Interleukin-1 signaling
  • CHUK
  • CUL1
  • IKBKB
  • IKBKG
  • IL1A
  • IL1B
  • IL1R1
  • IL1R2
  • IL1RAP
  • IL1RN
  • IRAK1
  • IRAK2
  • IRAK3
  • IRAK4
  • LOC100686569
  • LOC100687259
  • LOC119881719
  • LOC610717
  • MAP2K6
  • MAP3K3
  • MAP3K7
  • MYD88
  • NFKB1
  • NFKBIA
  • PELI1
  • PELI2
  • PELI3
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC1
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMD1
  • PSMD10
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RBX1
  • RELA
  • RPS27A
  • SKP1
  • SQSTM1
  • TAB1
  • TAB2
  • TAB3
  • TOLLIP
  • TRAF6
  • UBA52
  • UBB
  • UBC
  • UBCEP2
  • UBE2N
Canis familiaris (dog)
Terminal pathway of complement
  • C5
  • C6
  • C7
  • C8A
  • C8B
  • C8G
  • C9
  • CLU
Canis familiaris (dog)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • ABCC1
  • ALOX15
  • ALOX5
  • ALOX5AP
  • CYP4A11
  • CYP4A37
  • CYP4A39
  • CYP4B1
  • CYP4F22
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • LOC119863926
  • LTA4H
  • LTC4S
  • MRP1
Canis familiaris (dog)
N-Glycan antennae elongation
  • B4GALT1
  • B4GALT2
  • B4GALT3
  • B4GALT4
  • B4GALT5
  • B4GALT6
  • COA5
  • MGAT4B
  • MGAT4C
  • MGAT5
  • ST3GAL4
  • ST6GAL1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA6
Canis familiaris (dog)
Sialic acid metabolism
  • CMAS
  • CTSA
  • GLB1
  • GNE
  • NANP
  • NANS
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • NPL
  • SLC17A5
  • SLC35A1
  • ST3GAL1
  • ST3GAL2
  • ST3GAL3
  • ST3GAL4
  • ST3GAL5
  • ST3GAL6
  • ST6GAL1
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC2
  • ST6GALNAC3
  • ST6GALNAC4
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA4
  • ST8SIA5
  • ST8SIA6
Canis familiaris (dog)
Dermatan sulfate biosynthesis
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • DCN1C
  • DSE
  • DSEL
  • NCAN
  • UST
  • VCAN
Canis familiaris (dog)
Phase 2 - plateau phase
  • CACNA1C
  • CACNA2D2
  • CACNB1
  • CACNB2
  • CACNG4
  • CACNG6
  • CACNG7
  • CACNG8
Canis familiaris (dog)
Phase 0 - rapid depolarisation
  • CACNA1C
  • CACNA2D2
  • CACNB1
  • CACNB2
  • CACNG4
  • CACNG6
  • CACNG7
  • CACNG8
Canis familiaris (dog)
Elevation of cytosolic Ca2+ levels
  • ITPR1
  • ITPR2
  • ITPR3
  • P2RX1
  • P2RX2
  • P2RX3
  • P2RX4
  • P2RX5
  • P2RX6
  • P2RX7
  • TRPC3
  • TRPC6
  • TRPC7
Canis familiaris (dog)

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024