GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	November 12, 2024
ECODAB	April 1, 2019

Displaying entries **526 - 550** of **2074** in total

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Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism
EPH-Ephrin signaling	Ephrin type-A receptor 10 Ephrin type-A receptor 1 Ephrin type-A receptor 2 Ephrin type-A receptor 3 Ephrin type-A receptor 4 Ephrin type-A receptor 5 Ephrin type-A receptor 6 Ephrin type-A receptor 7 Ephrin type-A receptor 8 Ephrin type-B receptor 1 Ephrin type-B receptor 2 Ephrin type-B receptor 3 Ephrin type-B receptor 4 Ephrin type-B receptor 6 Ephrin-A1 Ephrin-A2 Ephrin-A3 Ephrin-A4 Ephrin-A5 Ephrin-B1 Ephrin-B2 Ephrin-B3 Tyrosine-protein kinase Fyn Tyrosine-protein kinase Lyn Tyrosine-protein kinase Yes	O15197 O43921 P06241 P07947 P07948 P20827 P21709 P29317 P29320 P29322 P29323 P52797 P52798 P52799 P52803 P54753 P54756 P54760 P54762 P54764 P98172 Q15375 Q15768 Q5JZY3 Q9UF33	BSK DRT ECK EEK EFL2 EFL3 EFNA1 EFNA2 EFNA3 EFNA4 EFNA5 EFNB1 EFNB2 EFNB3 EHK1 EHK2 EHK3 ELK EPH EPHA1 EPHA10 EPHA2 EPHA3 EPHA4 EPHA5 EPHA6 EPHA7 EPHA8 EPHB1 EPHB2 EPHB3 EPHB4 EPHB6 EPHT EPHT1 EPHT2 EPHT3 EPLG1 EPLG2 EPLG3 EPLG4 EPLG5 EPLG6 EPLG7 EPLG8 EPTH3 ERK ETK ETK1 ETK2 FYN HEK HEK11 HEK12 HEK2 HEK3 HEK5 HEK6 HEK7 HEK8 HTK HTKL JTK8 KIAA1459 LERK1 LERK2 LERK3 LERK4 LERK5 LERK6 LERK7 LERK8 LYN MYK1 NET SEK TNFAIP4 TYRO1 TYRO11 TYRO4 TYRO5 TYRO6 YES YES1	Homo sapiens (human)
EPHA-mediated growth cone collapse	Ephexin-1 Myosin light polypeptide 6 Myosin regulatory light chain 12B Myosin regulatory light polypeptide 9 Myosin-10 Myosin-11 Myosin-14 Myosin-9 Rho-associated protein kinase 1 Rho-associated protein kinase 2 Transforming protein RhoA Tyrosine-protein kinase Fyn Tyrosine-protein kinase Lyn Tyrosine-protein kinase Yes	O14950 O75116 P06241 P07947 P07948 P24844 P35579 P35580 P35749 P60660 P61586 Q13464 Q7Z406 Q8N5V2	ARH12 ARHA FYN JTK8 KIAA0619 KIAA0866 KIAA2034 LYN MLC2 MRLC1 MRLC2 MYH10 MYH11 MYH14 MYH9 MYL12B MYL6 MYL9 MYLC2B MYRL2 NGEF RHO12 RHOA ROCK1 ROCK2 YES YES1	Homo sapiens (human)
Epithelial-Mesenchymal Transition (EMT) during gastrulation	Eomesodermin homolog Fibroblast growth factor receptor 1 T-box transcription factor T Zinc finger protein SNAI1	O15178 O95863 O95936 P11362	BFGFR CEK EOMES FGFBR FGFR1 FLG FLT2 HBGFR SNAH SNAI1 T TBR2 TBXT	Homo sapiens (human)
SARS-CoV-1 targets PDZ proteins in cell-cell junction	Envelope small membrane protein Protein PALS1	P59637 Q8N3R9	E MPP5 PALS1 sM	Homo sapiens (human)
Maturation of protein E	Envelope small membrane protein Polyubiquitin-B Polyubiquitin-C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG47 P0CG48 P59637 P62979 P62987	E RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 sM	Homo sapiens (human)
Translation of Structural Proteins	Envelope small membrane protein Membrane protein Nucleoprotein ORF3a protein Spike glycoprotein	P59594 P59595 P59596 P59632 P59637	3a E M N S sM	Homo sapiens (human)
Virion Assembly and Release	Envelope small membrane protein Membrane protein Nucleoprotein ORF3a protein ORF7a protein Spike glycoprotein	P59594 P59595 P59596 P59632 P59635 P59637	3a 7a E M N S sM	Homo sapiens (human)
Maturation of protein E	Envelope small membrane protein Polyubiquitin-B Polyubiquitin-C Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG47 P0CG48 P0DTC4 P62979 P62987	E RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2	Homo sapiens (human)
Translation of Structural Proteins	Envelope small membrane protein Membrane protein Nucleoprotein ORF3a protein Spike glycoprotein	P0DTC2 P0DTC3 P0DTC4 P0DTC5 P0DTC9	3a E M N S	Homo sapiens (human)
Virion Assembly and Release	Envelope small membrane protein Membrane protein Nucleoprotein ORF3a protein ORF7a protein Spike glycoprotein	P0DTC2 P0DTC3 P0DTC4 P0DTC5 P0DTC7 P0DTC9	3a 7a E M N S	Homo sapiens (human)
Regulation of gap junction activity	Envelope small membrane protein Gap junction alpha-1 protein Tight junction protein ZO-1	P0DTC4 P17302 Q07157	E GJA1 GJAL TJP1 ZO1	Homo sapiens (human)
SARS-CoV-2 targets PDZ proteins in cell-cell junction	Envelope small membrane protein Gap junction alpha-1 protein InaD-like protein Protein PALS1 Protein crumbs homolog 3 Tight junction protein ZO-1	P0DTC4 P17302 Q07157 Q8N3R9 Q8NI35 Q9BUF7	CIPP CRB3 E GJA1 GJAL INADL MPP5 PALS1 PATJ TJP1 ZO1	Homo sapiens (human)
Assembly Of The HIV Virion	Envelope glycoprotein gp160 Gag polyprotein Gag-Pol polyprotein Peptidyl-prolyl cis-trans isomerase A Polyubiquitin-B Polyubiquitin-C Protein Nef Protein Rev Protein Vpr Protein Vpu Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein Virion infectivity factor	P04578 P04585 P04591 P04601 P04618 P05919 P0CG47 P0CG48 P62937 P62979 P62987 P69723 P69726	CYPA PPIA RPS27A UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 env gag gag-pol nef rev vif vpr vpu	Homo sapiens (human)
Synthesis and processing of ENV and VPU	Envelope glycoprotein gp160 Furin Protein Vpu	P04578 P05919 P09958	FUR FURIN PACE PCSK3 env vpu	Homo sapiens (human)
Mitochondrial short-chain enoyl-CoA hydratase deficiency 1	Enoyl-CoA hydratase, mitochondrial	P30084	ECHS1	Homo sapiens (human)
Beta oxidation of hexanoyl-CoA to butanoyl-CoA	Enoyl-CoA hydratase, mitochondrial Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial Short-chain specific acyl-CoA dehydrogenase, mitochondrial Trifunctional enzyme subunit alpha, mitochondrial Trifunctional enzyme subunit beta, mitochondrial	P16219 P30084 P40939 P55084 Q16836	ACADS ECHS1 HAD HAD1 HADH HADHA HADHB HADHSC SCHAD	Homo sapiens (human)
Beta oxidation of octanoyl-CoA to hexanoyl-CoA	Enoyl-CoA hydratase, mitochondrial Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial Medium-chain specific acyl-CoA dehydrogenase, mitochondrial Trifunctional enzyme subunit alpha, mitochondrial Trifunctional enzyme subunit beta, mitochondrial	P11310 P30084 P40939 P55084 Q16836	ACADM ECHS1 HAD HAD1 HADH HADHA HADHB HADHSC SCHAD	Homo sapiens (human)
Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA	Enoyl-CoA hydratase, mitochondrial Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial Long-chain specific acyl-CoA dehydrogenase, mitochondrial Trifunctional enzyme subunit alpha, mitochondrial Trifunctional enzyme subunit beta, mitochondrial	P28330 P30084 P40939 P55084 Q16836	ACADL ECHS1 HAD HAD1 HADH HADHA HADHB HADHSC SCHAD	Homo sapiens (human)
Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA	Enoyl-CoA hydratase, mitochondrial Enoyl-[acyl-carrier-protein] reductase, mitochondrial Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial Medium-chain specific acyl-CoA dehydrogenase, mitochondrial Trifunctional enzyme subunit alpha, mitochondrial Trifunctional enzyme subunit beta, mitochondrial	P11310 P30084 P40939 P55084 Q16836 Q9BV79	ACADM ECHS1 HAD HAD1 HADH HADHA HADHB HADHSC MECR NBRF1 SCHAD	Homo sapiens (human)
Pexophagy	Endothelial PAS domain-containing protein 1 Microtubule-associated proteins 1A/1B light chain 3B Next to BRCA1 gene 1 protein Peroxisomal targeting signal 1 receptor Polyubiquitin-B Polyubiquitin-C Sequestosome-1 Serine-protein kinase ATM Ubiquitin carboxyl-terminal hydrolase 30 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	P0CG47 P0CG48 P50542 P62979 P62987 Q13315 Q13501 Q14596 Q70CQ3 Q99814 Q9GZQ8	1A13B ATM BHLHE73 EPAS1 HIF2A KIAA0049 M17S2 MAP1ALC3 MAP1LC3B MOP2 NBR1 ORCA OSIL PASD2 PEX5 PXR1 RPS27A SQSTM1 UBA52 UBA80 UBB UBC UBCEP1 UBCEP2 USP30	Homo sapiens (human)
Cellular response to hypoxia	Endothelial PAS domain-containing protein 1 Hypoxia-inducible factor 1-alpha inhibitor Hypoxia-inducible factor 1-alpha	Q16665 Q99814 Q9NWT6	BHLHE73 BHLHE78 EPAS1 FIH1 HIF1A HIF1AN HIF2A MOP1 MOP2 PASD2 PASD8	Homo sapiens (human)
Transcriptional regulation of pluripotent stem cells	Endothelial PAS domain-containing protein 1 Homeobox protein NANOG Hypoxia-inducible factor 3-alpha Krueppel-like factor 4 Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 4 POU domain, class 5, transcription factor 1 PR domain zinc finger protein 14 Pre-B-cell leukemia transcription factor 1 Protein lin-28 homolog A Sal-like protein 4 Signal transducer and activator of transcription 3 Steroidogenic factor 1 Transcription factor SOX-2 Zinc finger and SCAN domain-containing protein 10 Zinc finger protein ZIC 3	O43474 O60481 P40424 P40763 P48431 Q01860 Q13285 Q13485 Q15796 Q96SZ4 Q99814 Q9GZV8 Q9H9S0 Q9H9Z2 Q9UJQ4 Q9Y2N7	AD4BP APRF BHLHE17 BHLHE73 CSDD1 DPC4 EPAS1 EZF FTZF1 GKLF HIF2A HIF3A KLF4 LIN28 LIN28A MADH2 MADH4 MADR2 MOP2 MOP7 NANOG NR5A1 OCT3 OCT4 OTF3 PASD2 PASD7 PBX1 POU5F1 PRDM14 PRL SALL4 SF1 SMAD2 SMAD4 SOX2 STAT3 ZCCHC1 ZIC3 ZNF203 ZNF206 ZNF797 ZSCAN10	Homo sapiens (human)
PTK6 Expression	Endothelial PAS domain-containing protein 1 Glucocorticoid receptor Hypoxia-inducible factor 1-alpha Proline-, glutamic acid- and leucine-rich protein 1 Protein-tyrosine kinase 6	P04150 Q13882 Q16665 Q8IZL8 Q99814	BHLHE73 BHLHE78 BRK EPAS1 GRL HIF1A HIF2A HMX3 MNAR MOP1 MOP2 NR3C1 PASD2 PASD8 PELP1 PTK6	Homo sapiens (human)
Small interfering RNA (siRNA) biogenesis	Endoribonuclease Dicer Interferon-inducible double-stranded RNA-dependent protein kinase activator A Protein argonaute-1 Protein argonaute-2 Protein argonaute-3 Protein argonaute-4 RISC-loading complex subunit TARBP2 Translin-associated protein X Translin	O75569 Q15631 Q15633 Q99598 Q9H9G7 Q9HCK5 Q9UKV8 Q9UL18 Q9UPY3	AGO1 AGO2 AGO3 AGO4 DICER DICER1 EIF2C1 EIF2C2 EIF2C3 EIF2C4 HERNA KIAA0928 KIAA1567 PACT PRKRA RAX TARBP2 TRAX TRBP TSN TSNAX	Homo sapiens (human)
Defective MAN1B1 causes MRT15	Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase	Q9UKM7	MAN1B1	Homo sapiens (human)

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