GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 201 - 225 of 360 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
Regulation by c-FLIP
  • APT1
  • CASP8
  • CASP9
  • FADD
  • FAS
  • LOC100624226
  • LOC100737977
  • RIPK1
  • TNFRSF6
  • TRADD
  • TRAF2
Sus scrofa (pig)
Platelet sensitization by LDL
  • APOB
  • ApoER2
  • LRP8
  • MAPK14
  • PECAM1
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5C
  • PPP2R5D
  • PTPN11
Sus scrofa (pig)
RIPK1-mediated regulated necrosis
  • FLOT1
  • FLOT2
  • MLKL
  • PDCD6IP
  • RIPK1
  • RIPK3
  • SDCBP
Sus scrofa (pig)
Orexin and neuropeptides FF and QRFP bind to their respective receptors
  • HCRT
  • HCRTR1
  • HCRTR2
  • NPFFR1
  • NPFFR2
  • ORX
  • OX
  • PPOX
  • QRFPR
Sus scrofa (pig)
RAC3 GTPase cycle
  • ABI1
  • ABI2
  • ABL2
  • ABR
  • AMIGO2
  • ARAP2
  • ARAP3
  • ARHGAP1
  • ARHGAP15
  • ARHGAP17
  • ARHGAP21
  • ARHGAP26
  • ARHGAP35
  • ARHGAP39
  • ARHGAP5
  • ARHGAP6
  • BAIAP2
  • BAIAP2L1
  • BCR
  • BRK1
  • CAV1
  • CDC42
  • CDC42EP1
  • CYBA
  • CYFIP1
  • DEPDC1B
  • DIAPH3
  • DOCK10
  • DSG2
  • EMD
  • EPHA2
  • ESYT1
  • FERMT2
  • GARRE1
  • GIT1
  • GIT2
  • GP91-PHOX
  • ITGB1
  • JAG1
  • KIAA0355
  • LAMTOR1
  • LBR
  • LMAN1
  • MCAM
  • MCF2
  • MPP7
  • NCF1
  • NCF2
  • NCF4
  • NCKAP1
  • NCKAP1L
  • NHS
  • NOX1
  • NOX3
  • NOXA1
  • NOXO1
  • OCRL
  • OPHN1
  • PAK1
  • PAK2
  • PGRMC2
  • PIK3R1
  • PIK3R2
  • PREX1
  • RAB7A
  • RAC3
  • RACGAP1
  • RAPGEF1
  • RBM39
  • SLC1A5
  • SLITRK3
  • SLITRK5
  • SNAP23
  • SRGAP2
  • SWAP70
  • SYDE1
  • TFRC
  • TIAM1
  • TRIO
  • VAMP3
  • VANGL1
  • VAV2
  • WASF2
  • YKT6
Sus scrofa (pig)
Toll Like Receptor 9 (TLR9) Cascade
  • EEA1
  • PIK3C3
  • PIK3R4
  • RBSN
  • TLR9
Sus scrofa (pig)
Signaling by ERBB4
  • BTC
  • DTR
  • EGF
  • EGFR
  • ERBB3
  • ERBB4
  • EREG
  • HBEGF
  • HEGFL
  • NRG1
  • NRG2
  • NRG3
Sus scrofa (pig)
RUNX3 regulates p14-ARF
  • CBFB
  • CCND1
  • EP300
  • HDAC4
  • RUNX3
  • TGFB1
Sus scrofa (pig)
Phospholipase C-mediated cascade; FGFR4
  • FGF1
  • FGF16
  • FGF18
  • FGF19
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF6
  • FGF8
  • FGF9
  • FGFR4
  • Fgf4
  • KLB
  • PLCG1
Sus scrofa (pig)
Elevation of cytosolic Ca2+ levels
  • ITPR1
  • ITPR3
  • P2RX1
  • P2RX2
  • P2RX3
  • P2RX4
  • P2RX5
  • P2RX6
  • P2RX7
  • TRPC3
  • TRPC6
  • TRPC7
Sus scrofa (pig)
Regulation of necroptotic cell death
  • BIRC2
  • CASP8
  • CDC37
  • FADD
  • FLOT1
  • FLOT2
  • HSP90A
  • HSP90AA1
  • HSPCA
  • MLKL
  • PDCD6IP
  • PIAP
  • RIPK1
  • RIPK3
  • RPS27A
  • SDCBP
  • STUB1
  • TNFRSF6
  • TRADD
  • TRAF2
  • UBA52
  • UBB
  • UBC
  • UBE2L3
Sus scrofa (pig)
Non-integrin membrane-ECM interactions
  • DDR1
  • DDR2
Sus scrofa (pig)
The NLRP3 inflammasome
  • HSP90AB1
  • NLRP3
  • P2RX7
  • PANX
  • PANX1
  • TXN
  • TXNIP
Sus scrofa (pig)
Cristae formation
  • ATP5A1
  • ATP5A2
  • ATP5F1A
  • ATP5F1B
  • ATP5F1C
  • ATP5F1E
  • ATP5I
  • ATP5J2
  • ATP5MC2
  • ATP5MC3
  • ATP5ME
  • ATP5MF
  • ATP5O
  • ATP5PO
  • ATP6
  • ATP8
  • ATPASE6
  • ATPASE8
  • DMAC2L
  • LOC100519871
  • MT-ATP6
  • MT-ATP8
  • MTATP6
  • MTATP8
Sus scrofa (pig)
Sialic acid metabolism
  • CMAS
  • CTSA
  • GLB1
  • GNE
  • NANP
  • NANS
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • NPL
  • SLC17A5
  • SLC35A1
  • ST3GAL-III
  • ST3GAL1
  • ST3GAL2
  • ST3GAL3
  • ST3GAL4
  • ST3GAL5
  • ST3GAL6
  • ST6GAL1
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC2
  • ST6GALNAC3
  • ST6GALNAC4
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA4
  • ST8SIA5
  • ST8SIA6
  • ST8Sia 2
Sus scrofa (pig)
Drug-mediated inhibition of MET activation
  • HGF
  • MET
Sus scrofa (pig)
Ovarian tumor domain proteases
  • APC
  • CDK1
  • ESR
  • ESR1
  • NR3A1
  • OTUB1
  • OTUB2
  • OTUD3
  • OTUD7A
  • OTUD7B
  • P53
  • PTEN
  • RHOA
  • RIPK1
  • RNF128
  • RPS27A
  • TNFAIP3
  • TNIP1
  • TNIP2
  • TNIP3
  • TP53
  • TRAF3
  • TRAF6
  • UBA52
  • UBB
  • UBC
  • UBE2D1
  • VCPIP1
  • YOD1
  • ZRANB1
Sus scrofa (pig)
SHC-related events triggered by IGF1R
  • GRB2
  • IGF1
  • IGF1R
  • IGF2
  • SHC1
  • SOS1
Sus scrofa (pig)
SUMOylation of intracellular receptors
  • AR
  • ESR
  • ESR1
  • FTZF1
  • HDAC4
  • NR1A1
  • NR1H2
  • NR1H3
  • NR1H4
  • NR1I1
  • NR1I2
  • NR3A1
  • NR3C1
  • NR3C2
  • NR5A1
  • NR5A2
  • PGR
  • PIAS1
  • PIAS3
  • PIAS4
  • PPARA
  • RARA
  • RORA
  • RXRA
  • SMT3A
  • SMT3H2
  • SUMO1
  • SUMO2
  • SUMO3
  • THRA
  • THRB
  • UBE2I
  • VDR
Sus scrofa (pig)
Organic cation transport
  • OCT2
  • RUNX1
  • SLC22A1
  • SLC22A15
  • SLC22A16
  • SLC22A18
  • SLC22A2
  • SLC22A3
  • SLC22A4
  • SLC22A5
Sus scrofa (pig)
DAP12 interactions
  • B2M
  • CLEC5A
  • CLECSF5
  • DAP12
  • KIR2DL1
  • KLRD1
  • LOC100513601
  • LOC100513863
  • LOC100523789
  • MDL1
  • NCR2
  • SIGLEC14
  • SIGLEC15
  • SIGLEC5
  • SIRPA
  • SLA-2
  • SLA-3
  • SLA-6
  • SLA-7
  • SLA-8
  • TREM1
  • TREM2
  • TYROBP
Sus scrofa (pig)
Sphingolipid catabolism
  • ACER1
  • ACER2
  • ACER3
  • ALDH3A2
  • ALDH3B1
  • ALDH3B2
  • LPP1
  • PLPP1
  • PLPP3
  • PPAP2A
  • SGPL1
  • SGPP1
  • SGPP2
Sus scrofa (pig)
Downregulation of ERBB2 signaling
  • BTC
  • CDC37
  • CUL5
  • DTR
  • EGF
  • EGFR
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • HBEGF
  • HEGFL
  • HSP90A
  • HSP90AA1
  • HSPCA
  • MATK
  • NRG1
  • NRG2
  • NRG3
  • PTPN12
  • PTPN18
  • RPS27A
  • STUB1
  • UBA52
  • UBB
  • UBC
Sus scrofa (pig)
Signaling by CSF3 (G-CSF)
  • CSF3
  • CSF3R
  • GAB2
  • GRB2
  • HCK
  • JAK1
  • JAK2
  • KRAS
  • LYN
  • PTPN11
  • SHC1
  • TYK2
Sus scrofa (pig)
TWIK-related alkaline pH activated K+ channel (TALK)
  • KCNK16
  • KCNK17
Sus scrofa (pig)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024